Miyakogusa Predicted Gene

Lj1g3v4327740.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4327740.2 Non Characterized Hit- tr|B3RSI3|B3RSI3_TRIAD
Putative uncharacterized protein (Fragment)
OS=Trichop,27.88,3e-18,CATION EFFLUX PROTEIN/ ZINC TRANSPORTER,Cation
efflux protein; Cation_efflux,Cation efflux protein; ,CUFF.32271.2
         (208 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g093290.1 | metal tolerance-like protein | HC | chr7:37063...   378   e-105
Medtr6g463330.1 | cation diffusion facilitator family transporte...    64   7e-11

>Medtr7g093290.1 | metal tolerance-like protein | HC |
           chr7:37063412-37072046 | 20130731
          Length = 390

 Score =  378 bits (970), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 185/205 (90%), Positives = 194/205 (94%)

Query: 4   LFLLFMSFSLAVEALHAFIQDESEHKHYLIVSAVTNLFVNLIGVWFFRNYARINLAYRNA 63
           LFLLFMSFSLAVEALHAFIQDESEHKHYL VSAVTNLFVNLIGVWFFRNYARINLAYRNA
Sbjct: 186 LFLLFMSFSLAVEALHAFIQDESEHKHYLNVSAVTNLFVNLIGVWFFRNYARINLAYRNA 245

Query: 64  EDMNHHSVFLHVLADSIRSAGLIMASWLLSIGVQNAEVLCLGLVSVAVFMLAVPLFRATG 123
           EDMN HSVFLHVL DSIRSAGLI+ASWLLSIGV+NAEVLCLGLVSVAVF+L +PLFRATG
Sbjct: 246 EDMNCHSVFLHVLTDSIRSAGLILASWLLSIGVENAEVLCLGLVSVAVFILVLPLFRATG 305

Query: 124 GILLQMAPPSIPTTALNKCLRQISALEDVMEVSQARFWELVPGHVVGSLLIQVKKGVDDR 183
           GILLQMAPPSIPTTA +KCLRQISA EDV++VSQARFWELVPGHVVGSL +QVKKGVDDR
Sbjct: 306 GILLQMAPPSIPTTAFSKCLRQISAHEDVLDVSQARFWELVPGHVVGSLSMQVKKGVDDR 365

Query: 184 PILEFVHGLYHELGVQDLTVQTDEA 208
           PILEFVH LYH+ GVQDLTVQ D A
Sbjct: 366 PILEFVHRLYHDFGVQDLTVQIDHA 390


>Medtr6g463330.1 | cation diffusion facilitator family transporter |
           HC | chr6:21913825-21916862 | 20130731
          Length = 905

 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 2/143 (1%)

Query: 65  DMNHHSVFLHVLADSIRSAGLIMASWLLSI-GVQNAEVLCLGLVSVAVFMLAVPLFRATG 123
           D N   +FLHVLAD++ S G+++++ L+   G   A+  C   +SV +    +PL R + 
Sbjct: 761 DHNMEGIFLHVLADTLGSVGVVISTLLIKYKGWLVADPACSIFISVLIVSSVIPLLRNSA 820

Query: 124 GILLQMAPPSIPTTALNKCLRQISALEDVMEVSQARFWELVPGHVVGSLLIQVKKGVDDR 183
            +LLQ  P +     L   L  +  ++ V  + +   W      VVG+L + V    D  
Sbjct: 821 EVLLQRVPRA-HEHDLKDSLSDVLKIKGVYGIQKFHSWSFTNTDVVGTLHLHVATDTDKI 879

Query: 184 PILEFVHGLYHELGVQDLTVQTD 206
            +   V  L H  G++DLT+Q +
Sbjct: 880 SVKSQVSHLLHNAGIKDLTMQVE 902