Miyakogusa Predicted Gene

Lj1g3v4316360.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4316360.2 Non Characterized Hit- tr|D7SQC4|D7SQC4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,38.12,3e-18,seg,NULL,CUFF.32233.2
         (258 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g036740.1 | hypothetical protein | HC | chr2:15907080-1591...   241   4e-64
Medtr2g036740.2 | hypothetical protein | HC | chr2:15907109-1591...   241   4e-64
Medtr4g127680.1 | hypothetical protein | HC | chr4:53058375-5305...   128   5e-30

>Medtr2g036740.1 | hypothetical protein | HC |
           chr2:15907080-15910681 | 20130731
          Length = 253

 Score =  241 bits (615), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 138/261 (52%), Positives = 164/261 (62%), Gaps = 45/261 (17%)

Query: 1   MGTKIEYSINPLAYSVDCKNFTVDGVDVWEHNLKKELAYNNNQCSIGMDKLQVYMDKMLD 60
           MGTKIEYSINPLAYS DC NFTV GVD WEH   K L  +N  CSIG++ LQ  MD++LD
Sbjct: 1   MGTKIEYSINPLAYSKDCNNFTVVGVDAWEHYQNKGLKVSNKHCSIGVNNLQNPMDRILD 60

Query: 61  RNNIESIKKTMQMHEEIFKHQVRELHRVYSVQKMLMGELK----QHKFWTSMNNIGTNNP 116
           RNN+ESI+KTMQ+ E+IFK+QV+ELHRVY+VQKMLM E K    Q+KFWT MN  G N P
Sbjct: 61  RNNMESIRKTMQIQEDIFKNQVKELHRVYNVQKMLMDEHKNEGNQNKFWTPMN--GINQP 118

Query: 117 YVVKXXXXXXXXISYGTDFHVGSLREDLHVKEGSGSCSGERNIKRQRDFDLERPAAERDI 176
           Y V+         S     HV  L+E+L++KE SGSCSGE   KRQ+DFDLE+PA     
Sbjct: 119 YFVQQQKPTQISFS-----HVQILKEELYIKERSGSCSGEIIKKRQKDFDLEKPAT---- 169

Query: 177 FARGCDEGEAGPSSYTAFQSCKISNDDEDMEVDLSLSIGGRSSHVKKKKPYLLPLGFSGS 236
                                  S+ DEDMEVDL+L IG   +  KKKK Y+LP G    
Sbjct: 170 -----------------------SDCDEDMEVDLTLCIGSNETKNKKKKSYMLPNGM--- 203

Query: 237 SPIGKTREFNSSISFQSDNKG 257
               KT+E NS +SFQSD  G
Sbjct: 204 ----KTKELNSYLSFQSDRIG 220


>Medtr2g036740.2 | hypothetical protein | HC |
           chr2:15907109-15910681 | 20130731
          Length = 253

 Score =  241 bits (615), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 138/261 (52%), Positives = 164/261 (62%), Gaps = 45/261 (17%)

Query: 1   MGTKIEYSINPLAYSVDCKNFTVDGVDVWEHNLKKELAYNNNQCSIGMDKLQVYMDKMLD 60
           MGTKIEYSINPLAYS DC NFTV GVD WEH   K L  +N  CSIG++ LQ  MD++LD
Sbjct: 1   MGTKIEYSINPLAYSKDCNNFTVVGVDAWEHYQNKGLKVSNKHCSIGVNNLQNPMDRILD 60

Query: 61  RNNIESIKKTMQMHEEIFKHQVRELHRVYSVQKMLMGELK----QHKFWTSMNNIGTNNP 116
           RNN+ESI+KTMQ+ E+IFK+QV+ELHRVY+VQKMLM E K    Q+KFWT MN  G N P
Sbjct: 61  RNNMESIRKTMQIQEDIFKNQVKELHRVYNVQKMLMDEHKNEGNQNKFWTPMN--GINQP 118

Query: 117 YVVKXXXXXXXXISYGTDFHVGSLREDLHVKEGSGSCSGERNIKRQRDFDLERPAAERDI 176
           Y V+         S     HV  L+E+L++KE SGSCSGE   KRQ+DFDLE+PA     
Sbjct: 119 YFVQQQKPTQISFS-----HVQILKEELYIKERSGSCSGEIIKKRQKDFDLEKPAT---- 169

Query: 177 FARGCDEGEAGPSSYTAFQSCKISNDDEDMEVDLSLSIGGRSSHVKKKKPYLLPLGFSGS 236
                                  S+ DEDMEVDL+L IG   +  KKKK Y+LP G    
Sbjct: 170 -----------------------SDCDEDMEVDLTLCIGSNETKNKKKKSYMLPNGM--- 203

Query: 237 SPIGKTREFNSSISFQSDNKG 257
               KT+E NS +SFQSD  G
Sbjct: 204 ----KTKELNSYLSFQSDRIG 220


>Medtr4g127680.1 | hypothetical protein | HC |
           chr4:53058375-53055732 | 20130731
          Length = 163

 Score =  128 bits (322), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 82/170 (48%), Positives = 93/170 (54%), Gaps = 56/170 (32%)

Query: 57  KMLDRNNIESIKKTMQMHEEIFKHQVRELHRVYSVQKMLMGEL----KQHKFWTSMNNIG 112
           +MLDRNNIESIKKTMQMHE+IFKHQVRELHRVYSVQKMLM EL    KQ  FW  M++I 
Sbjct: 4   RMLDRNNIESIKKTMQMHEDIFKHQVRELHRVYSVQKMLMNELKNKIKQQNFWNPMDDI- 62

Query: 113 TNNPYVVKXXXXXXXXISYGTDFHVGSLREDLHVKEGSGSCSGERNIKRQRDFDLERPAA 172
                                                      E+     R FDLE+PA 
Sbjct: 63  -------------------------------------------EKQFS--RGFDLEKPAV 77

Query: 173 ERDIF--ARGCDEGEAGPSSYT-AFQSCKISNDD---EDMEVDLSLSIGG 216
           E      + G DEGE G SS T AFQSCK+S  D   E++EVDL+LSIGG
Sbjct: 78  ENTFIGSSLGIDEGEVGTSSNTAAFQSCKLSTFDDFNEELEVDLTLSIGG 127