Miyakogusa Predicted Gene

Lj1g3v4314280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4314280.1 Non Characterized Hit- tr|B4F801|B4F801_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,34.91,0.00000000000004,seg,NULL,CUFF.32231.1
         (267 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g030420.1 | hypothetical protein | HC | chr1:10579254-1057...   370   e-103
Medtr5g065930.1 | MADS box interactor-like protein, putative | H...    65   6e-11
Medtr5g065930.2 | MADS box interactor-like protein, putative | H...    54   2e-07

>Medtr1g030420.1 | hypothetical protein | HC |
           chr1:10579254-10575220 | 20130731
          Length = 282

 Score =  370 bits (951), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 188/273 (68%), Positives = 208/273 (76%), Gaps = 8/273 (2%)

Query: 1   MTGHHALEMTKTVLEVADVAWSAVECGHH--------LRHHNSPATADQNCPSDQDXXXX 52
           M  H+A+EM KTVLEVADVAW+AVE  HH        + H +     D NCPSDQD    
Sbjct: 1   MRTHNAVEMAKTVLEVADVAWTAVEYHHHHHRHHDPVVTHDDKYDDKDNNCPSDQDLEAL 60

Query: 53  XXXXXXXXXXXXXXXXXXXXXSESPSFLNNCPPDLHTRLVATVKSDEYLTRLKFLQQETA 112
                                SES SFL+NCPPDLH RL ATV+SDEYLTRLK LQ+ETA
Sbjct: 61  KLENRRLRNLLDQNLKLLNNLSESNSFLSNCPPDLHVRLAATVRSDEYLTRLKVLQEETA 120

Query: 113 GGGNQFPFKEATEVDYRSADILINVDSKEPSWWVWVTDEMDPSNVEETSGIDDENYLVIG 172
            GGNQFPFKEATEVDY+SADILINVDSKEPSWWVWV DE DP N EE SGIDDE+YL+I 
Sbjct: 121 SGGNQFPFKEATEVDYQSADILINVDSKEPSWWVWVADETDPINFEECSGIDDESYLIIS 180

Query: 173 EEHVIEGVANFMARCIVSNPKALKLSPEELQKTLSKALCGTSKLEKILDIWSAGKMFYAL 232
           EEHV++GVANFMARCI+SNPKA  +SPEELQ  LSKA  GTSKLEK+LDIW+AGK+FYAL
Sbjct: 181 EEHVVDGVANFMARCIMSNPKARNMSPEELQNNLSKAFAGTSKLEKVLDIWAAGKLFYAL 240

Query: 233 STWGLALAGLYQSRALLKVAAHGVHSGSKLALK 265
           STWGLALAGLYQ+R+LLKVAA GVHSG KLALK
Sbjct: 241 STWGLALAGLYQTRSLLKVAAKGVHSGGKLALK 273


>Medtr5g065930.1 | MADS box interactor-like protein, putative | HC |
           chr5:27762394-27757492 | 20130731
          Length = 223

 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 58/104 (55%)

Query: 164 DDENYLVIGEEHVIEGVANFMARCIVSNPKALKLSPEELQKTLSKALCGTSKLEKILDIW 223
           D+E+Y+++ ++ +++G+A FMA  ++S  K   L+P +LQ  LSK      K  K+   W
Sbjct: 120 DEEDYVLVRQDDIVDGIACFMAAYLLSLKKTKDLTPSQLQDALSKTFSVKKKKGKLRKAW 179

Query: 224 SAGKMFYALSTWGLALAGLYQSRALLKVAAHGVHSGSKLALKCL 267
              K+ Y +++WG    G+YQ+  +L+ A     +  ++  K L
Sbjct: 180 DGSKVIYNVASWGATAIGIYQNPVILRAATKAFWTSCQVISKLL 223


>Medtr5g065930.2 | MADS box interactor-like protein, putative | HC |
           chr5:27762394-27757515 | 20130731
          Length = 197

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 45/78 (57%)

Query: 164 DDENYLVIGEEHVIEGVANFMARCIVSNPKALKLSPEELQKTLSKALCGTSKLEKILDIW 223
           D+E+Y+++ ++ +++G+A FMA  ++S  K   L+P +LQ  LSK      K  K+   W
Sbjct: 120 DEEDYVLVRQDDIVDGIACFMAAYLLSLKKTKDLTPSQLQDALSKTFSVKKKKGKLRKAW 179

Query: 224 SAGKMFYALSTWGLALAG 241
              K+ Y +++WG    G
Sbjct: 180 DGSKVIYNVASWGATAIG 197