Miyakogusa Predicted Gene

Lj1g3v4314270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4314270.1 tr|G4FAI8|G4FAI8_9GAMM ChaC-like protein
OS=Halomonas sp. HAL1 GN=HAL1_17111 PE=4
SV=1,48.74,3e-19,BtrG-like,NULL; SUBFAMILY NOT NAMED,NULL; CATION
TRANSPORT PROTEIN CHAC-RELATED,ChaC-like protein; n,CUFF.32222.1
         (121 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g030430.1 | cation transporter ChaC | HC | chr1:10587093-1...   222   6e-59
Medtr3g109250.1 | cation transporter ChaC | HC | chr3:50503099-5...   139   5e-34
Medtr1g009210.1 | cation transporter ChaC | HC | chr1:1226347-12...   137   3e-33

>Medtr1g030430.1 | cation transporter ChaC | HC |
           chr1:10587093-10581116 | 20130731
          Length = 185

 Score =  222 bits (565), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 104/120 (86%), Positives = 111/120 (92%)

Query: 1   MVMWVFGYGSLITKAGFKYDERLVGFIKDYRRVFYQGSTDHRGTPEFPGRTVTLEPAEGE 60
           M +WVFGYGSLI+KAGF YDERLVGFIKDYRRVFYQGSTDHRGTPEFPGRTVTLEPA+GE
Sbjct: 1   MAIWVFGYGSLISKAGFNYDERLVGFIKDYRRVFYQGSTDHRGTPEFPGRTVTLEPAQGE 60

Query: 61  ICWGAAYKISNKEDQEIALTYLEVREKQYDKKEYVDVFTEVNATTPAISGALIYSFSKQK 120
           ICWGAAYKI+ KEDQEIALTYL VREKQYD+KEYVDVFTE+ ATTPAISGAL+Y  S  K
Sbjct: 61  ICWGAAYKITKKEDQEIALTYLGVREKQYDRKEYVDVFTELTATTPAISGALVYIASPDK 120


>Medtr3g109250.1 | cation transporter ChaC | HC |
           chr3:50503099-50500528 | 20130731
          Length = 224

 Score =  139 bits (350), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 63/121 (52%), Positives = 85/121 (70%), Gaps = 1/121 (0%)

Query: 1   MVMWVFGYGSLITKAGFKYDERLVGFIKDYRRVFYQGSTDHRGTPEFPGRTVTLEPAEGE 60
           MV WVFGYGSL+   GF YDE+++GFIKDYRRVF     DHRGTPE P RT TLE  EGE
Sbjct: 1   MVFWVFGYGSLVWNPGFDYDEKMLGFIKDYRRVFDLACIDHRGTPENPARTCTLEEKEGE 60

Query: 61  ICWGAAYKI-SNKEDQEIALTYLEVREKQYDKKEYVDVFTEVNATTPAISGALIYSFSKQ 119
           ICWG AY +    E +++A+ YLE RE +YD+K  V+ + E ++  PA++G ++++ +  
Sbjct: 61  ICWGVAYCVRGGPEKEKLAMQYLERRECEYDQKTLVNFYKEGDSLHPALTGVIVFTSTPD 120

Query: 120 K 120
           K
Sbjct: 121 K 121


>Medtr1g009210.1 | cation transporter ChaC | HC |
           chr1:1226347-1224296 | 20130731
          Length = 206

 Score =  137 bits (344), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 61/121 (50%), Positives = 86/121 (71%), Gaps = 1/121 (0%)

Query: 1   MVMWVFGYGSLITKAGFKYDERLVGFIKDYRRVFYQGSTDHRGTPEFPGRTVTLEPAEGE 60
           MV WVFGYGSL+   GF+YDE++VGFIKDYRRVFY    DHRGTPE+P RT TLE  +G 
Sbjct: 1   MVFWVFGYGSLVWNPGFEYDEKVVGFIKDYRRVFYLACFDHRGTPEYPARTCTLEHKKGA 60

Query: 61  ICWGAAYKI-SNKEDQEIALTYLEVREKQYDKKEYVDVFTEVNATTPAISGALIYSFSKQ 119
           ICWGAA+ +  + + +++ + YLE RE +YDKK  V+ + + ++  PA  G ++++ +  
Sbjct: 61  ICWGAAFCVRGDPKKEKMVMQYLERRECEYDKKTLVNFYKKGDSLKPAFKGVVVFTSTND 120

Query: 120 K 120
           K
Sbjct: 121 K 121