Miyakogusa Predicted Gene

Lj1g3v4288730.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4288730.1 Non Characterized Hit- tr|I1JNF7|I1JNF7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39622
PE,73.24,0,ZINC_FINGER_C2H2_2,Zinc finger, C2H2; C2H2 and C2HC zinc
fingers,NULL; seg,NULL; coiled-coil,NULL; A,CUFF.32173.1
         (341 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g093095.1 | C2H2-type zinc finger protein | HC | chr1:4193...   289   3e-78
Medtr1g016010.1 | C2H2-type zinc finger protein | HC | chr1:4158...    89   6e-18
Medtr1g112270.2 | C2H2 zinc finger protein, putative | HC | chr1...    89   9e-18
Medtr1g112270.1 | C2H2 zinc finger protein, putative | HC | chr1...    89   9e-18
Medtr4g059870.1 | C2H2 and C2HC zinc finger protein, putative | ...    88   1e-17
Medtr1g094115.1 | C2H2 zinc finger protein, putative | HC | chr1...    88   1e-17
Medtr1g094115.2 | C2H2 zinc finger protein, putative | HC | chr1...    88   2e-17
Medtr2g090745.1 | C2H2-like zinc finger protein, putative | HC |...    87   3e-17
Medtr8g017210.1 | C2H2-like zinc finger protein, putative | HC |...    86   4e-17
Medtr2g093960.1 | C2H2-type zinc finger protein | LC | chr2:4003...    86   5e-17
Medtr2g099990.1 | C2H2-type zinc finger protein | HC | chr2:4289...    85   1e-16
Medtr2g099990.2 | C2H2-type zinc finger protein | HC | chr2:4289...    82   8e-16
Medtr2g017720.1 | F-box associated protein | LC | chr2:5437660-5...    57   2e-08

>Medtr1g093095.1 | C2H2-type zinc finger protein | HC |
           chr1:41939075-41940250 | 20130731
          Length = 294

 Score =  289 bits (739), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 128/172 (74%), Positives = 149/172 (86%), Gaps = 3/172 (1%)

Query: 164 QYWIPTPSQILIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGSQP---TG 220
           QYWIP+P+QIL+GPTQFSC VC KTFNR+NNMQMHMWGHGSQYRKGPESL+G +P   + 
Sbjct: 99  QYWIPSPAQILVGPTQFSCTVCNKTFNRFNNMQMHMWGHGSQYRKGPESLKGPKPASSSS 158

Query: 221 MLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWR 280
           ML+LPCYCC+ GCRNNI++PRA+PLKDFRTLQTHYKRKHG K F CRKC K FAVRGDWR
Sbjct: 159 MLKLPCYCCAEGCRNNINYPRARPLKDFRTLQTHYKRKHGGKSFECRKCRKTFAVRGDWR 218

Query: 281 THEKNCGKLWYCICGSDFKHKRSLKDHIKAFGSGHAAYGIDGFEEEDEPASE 332
           THEKNCGKLW+CICGSDFKHKRSLKDH++AFG+GHA + ++    +    +E
Sbjct: 219 THEKNCGKLWFCICGSDFKHKRSLKDHVRAFGNGHAPHTLESLSFDGHKVNE 270


>Medtr1g016010.1 | C2H2-type zinc finger protein | HC |
           chr1:4158857-4161721 | 20130731
          Length = 452

 Score = 89.0 bits (219), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 11/142 (7%)

Query: 172 QILIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGSQPTGMLRLPCYCC-S 230
           Q L+   +F C +C K F R  N+Q+H  GH       P  L+      ++R   Y C  
Sbjct: 62  QTLLATNRFICEICNKGFQRDQNLQLHKRGHNL-----PWKLKKRNVNEIIRKKVYVCPE 116

Query: 231 PGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCG-KL 289
           P C   + H  ++ L D   ++ H+ RKHG K + C KC K +AV+ DW+ H K CG K 
Sbjct: 117 PTC---VHHDPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKRYAVQSDWKAHSKICGTKE 173

Query: 290 WYCICGSDFKHKRSLKDHIKAF 311
           + C CG+ F  + S   H +AF
Sbjct: 174 YKCDCGTLFSRRDSFITH-RAF 194


>Medtr1g112270.2 | C2H2 zinc finger protein, putative | HC |
           chr1:50790900-50782752 | 20130731
          Length = 571

 Score = 88.6 bits (218), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 74/146 (50%), Gaps = 10/146 (6%)

Query: 167 IPTPSQILIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGSQPTGMLRLPC 226
           I    + L+   +F C VC K F R  N+Q+H  GH   ++   ++ +  +P   + L  
Sbjct: 60  IALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTK--EPKRKVYL-- 115

Query: 227 YCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNC 286
            C  P C   + H  ++ L D   ++ HY RKHG K + C KC K +AV+ DW+ H K C
Sbjct: 116 -CPEPTC---VHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTC 171

Query: 287 GKLWY-CICGSDFKHKRSLKDHIKAF 311
           G   Y C CG+ F  + S   H +AF
Sbjct: 172 GTREYRCDCGTLFSRRDSFITH-RAF 196


>Medtr1g112270.1 | C2H2 zinc finger protein, putative | HC |
           chr1:50789869-50782797 | 20130731
          Length = 582

 Score = 88.6 bits (218), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 74/146 (50%), Gaps = 10/146 (6%)

Query: 167 IPTPSQILIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGSQPTGMLRLPC 226
           I    + L+   +F C VC K F R  N+Q+H  GH   ++   ++ +  +P   + L  
Sbjct: 71  IALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTK--EPKRKVYL-- 126

Query: 227 YCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNC 286
            C  P C   + H  ++ L D   ++ HY RKHG K + C KC K +AV+ DW+ H K C
Sbjct: 127 -CPEPTC---VHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTC 182

Query: 287 GKLWY-CICGSDFKHKRSLKDHIKAF 311
           G   Y C CG+ F  + S   H +AF
Sbjct: 183 GTREYRCDCGTLFSRRDSFITH-RAF 207


>Medtr4g059870.1 | C2H2 and C2HC zinc finger protein, putative | HC
           | chr4:22086566-22083892 | 20130731
          Length = 495

 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 68/139 (48%), Gaps = 9/139 (6%)

Query: 174 LIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGSQPTGMLRLPCYCCSPGC 233
           L+   +F C +C K F R  N+Q+H  GH       P  L+       +R   Y C    
Sbjct: 61  LMATNRFLCEICNKGFQRDQNLQLHRRGHNL-----PWKLKQRANKDQIRKKVYVCPE-- 113

Query: 234 RNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWY-C 292
           +  + H  ++ L D   ++ HY RKHG K + C KC K +AV+ DW+ H K CG   Y C
Sbjct: 114 KTCVHHEPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKC 173

Query: 293 ICGSDFKHKRSLKDHIKAF 311
            CG+ F  K S   H +AF
Sbjct: 174 DCGTIFSRKDSFITH-RAF 191


>Medtr1g094115.1 | C2H2 zinc finger protein, putative | HC |
           chr1:42286195-42289752 | 20130731
          Length = 522

 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 72/137 (52%), Gaps = 12/137 (8%)

Query: 177 PTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGSQPTGMLRLPCYCC-SPGCRN 235
           P++F C VC K F R  N+Q+H  GH   ++   +S +  +P    R   Y C  P C  
Sbjct: 56  PSKFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNK--EP----RRKVYLCPEPTC-- 107

Query: 236 NIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWY-CIC 294
            + H  ++ L D   ++ H+ RKHG K + C KC K +AV+ DW+ H K CG   Y C C
Sbjct: 108 -VHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRCDC 166

Query: 295 GSDFKHKRSLKDHIKAF 311
           G+ F  + S   H +AF
Sbjct: 167 GTLFSRRDSFITH-RAF 182


>Medtr1g094115.2 | C2H2 zinc finger protein, putative | HC |
           chr1:42286106-42289867 | 20130731
          Length = 539

 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 74/147 (50%), Gaps = 12/147 (8%)

Query: 167 IPTPSQILIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGSQPTGMLRLPC 226
           I    + L+   +F C VC K F R  N+Q+H  GH   ++   +S +  +P    R   
Sbjct: 63  IALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNK--EP----RRKV 116

Query: 227 YCC-SPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKN 285
           Y C  P C   + H  ++ L D   ++ H+ RKHG K + C KC K +AV+ DW+ H K 
Sbjct: 117 YLCPEPTC---VHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT 173

Query: 286 CGKLWY-CICGSDFKHKRSLKDHIKAF 311
           CG   Y C CG+ F  + S   H +AF
Sbjct: 174 CGTREYRCDCGTLFSRRDSFITH-RAF 199


>Medtr2g090745.1 | C2H2-like zinc finger protein, putative | HC |
           chr2:38896799-38894235 | 20130731
          Length = 429

 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 10/164 (6%)

Query: 149 EDDSGLMSTNRLNKGQYWIPTPSQILIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRK 208
           E  +G +  N  N     I    + L+   +F C +C K F R  N+Q+H  GH      
Sbjct: 5   EISNGFLHENTTNPEAEVISLSPKTLMATNRFVCEICLKDFQRDQNLQLHRRGHNL---- 60

Query: 209 GPESLRGSQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRK 268
            P  L+      + +    C    C +N  HP ++ L D   ++ H+ RKHG K + C K
Sbjct: 61  -PWKLKQRTSKEIRKRVYVCPEKTCVHN--HP-SRALGDLTGIKKHFCRKHGEKKWKCEK 116

Query: 269 CGKAFAVRGDWRTHEKNCGKLWY-CICGSDFKHKRSLKDHIKAF 311
           C K +AV+ DW+ H K CG   Y C CG+ F  + S   H +AF
Sbjct: 117 CSKFYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFVTH-RAF 159


>Medtr8g017210.1 | C2H2-like zinc finger protein, putative | HC |
           chr8:5790010-5786899 | 20130731
          Length = 517

 Score = 86.3 bits (212), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 70/140 (50%), Gaps = 12/140 (8%)

Query: 174 LIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGSQPTGMLRLPCYCC-SPG 232
           L+   +F C +C K F R  N+Q+H  GH   ++    + +       +R   Y C  P 
Sbjct: 85  LLAKNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKE------IRKKVYVCPEPT 138

Query: 233 CRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWY- 291
           C   + H  ++ L D   ++ H+ RKHG K + C KC K +AV+ DW+ H K CG   Y 
Sbjct: 139 C---VHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYR 195

Query: 292 CICGSDFKHKRSLKDHIKAF 311
           C CG+ F  + S   H +AF
Sbjct: 196 CDCGTLFSRRDSFITH-RAF 214


>Medtr2g093960.1 | C2H2-type zinc finger protein | LC |
           chr2:40039886-40042385 | 20130731
          Length = 414

 Score = 85.9 bits (211), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 9/139 (6%)

Query: 174 LIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGSQPTGMLRLPCYCCSPGC 233
           L+   +F C VC K F R  N+Q+H  GH       P  L+      ++R   Y C    
Sbjct: 55  LMTSNRFICEVCNKGFKRDQNLQLHRRGHNL-----PWKLKQRNKLEVIRKKVYVCPE-- 107

Query: 234 RNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCG-KLWYC 292
           ++ + H  ++ L D   ++ H+ RKHG K + C KC K +AV+ DW+ H K CG K + C
Sbjct: 108 KSCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTKEYRC 167

Query: 293 ICGSDFKHKRSLKDHIKAF 311
            CG+ F  K S   H +AF
Sbjct: 168 DCGTLFSRKDSFLTH-RAF 185


>Medtr2g099990.1 | C2H2-type zinc finger protein | HC |
           chr2:42897047-42899888 | 20130731
          Length = 468

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 12/147 (8%)

Query: 167 IPTPSQILIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGSQPTGMLRLPC 226
           I    + L+   +F C +C K F R  N+Q+H  GH   ++    +      +  +R   
Sbjct: 62  IALSPKTLMATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLKQRT------SNEIRKKV 115

Query: 227 YCC-SPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKN 285
           Y C  P C   + H  ++ L D   ++ H+ RKHG K + C KC K +AV+ DW+ H K 
Sbjct: 116 YVCPEPTC---VHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKT 172

Query: 286 CGKLWY-CICGSDFKHKRSLKDHIKAF 311
           CG   Y C CG+ F  + S   H +AF
Sbjct: 173 CGTREYRCDCGTLFSRRDSFITH-RAF 198


>Medtr2g099990.2 | C2H2-type zinc finger protein | HC |
           chr2:42897047-42899888 | 20130731
          Length = 399

 Score = 82.0 bits (201), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 12/139 (8%)

Query: 175 IGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGSQPTGMLRLPCYCC-SPGC 233
           +   +F C +C K F R  N+Q+H  GH   ++    +      +  +R   Y C  P C
Sbjct: 1   MATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLKQRT------SNEIRKKVYVCPEPTC 54

Query: 234 RNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWY-C 292
              + H  ++ L D   ++ H+ RKHG K + C KC K +AV+ DW+ H K CG   Y C
Sbjct: 55  ---VHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRC 111

Query: 293 ICGSDFKHKRSLKDHIKAF 311
            CG+ F  + S   H +AF
Sbjct: 112 DCGTLFSRRDSFITH-RAF 129


>Medtr2g017720.1 | F-box associated protein | LC |
           chr2:5437660-5435484 | 20130731
          Length = 432

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 13/109 (11%)

Query: 174 LIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGSQPTGMLRLPCYCCSPGC 233
           L+   +F C +C K F R  N+Q+H  GH       P  L+  + +  +R   Y C    
Sbjct: 336 LMATNRFVCEICLKDFQRDQNLQLHRRGHNL-----PWKLK-QRTSKKIRKRVYVCPEKI 389

Query: 234 RNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTH 282
           R + +HP ++ L D   ++ H+ RKHG K     KC K + V+ DW+ H
Sbjct: 390 RVH-NHP-SRALGDLTGIKKHFCRKHGEK-----KCSKFYVVQSDWKAH 431