Miyakogusa Predicted Gene

Lj1g3v4277590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4277590.1 tr|A4RVW9|A4RVW9_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901)
GN=OSTLU_31127,27.1,3e-17,ARM repeat,Armadillo-type fold; seg,NULL; no
description,Armadillo-like helical,CUFF.32286.1
         (432 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g092130.1 | armadillo/beta-catenin-like repeat protein | H...   635   0.0  

>Medtr7g092130.1 | armadillo/beta-catenin-like repeat protein | HC |
            chr7:36483045-36501341 | 20130731
          Length = 1107

 Score =  635 bits (1639), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/439 (75%), Positives = 368/439 (83%), Gaps = 7/439 (1%)

Query: 1    MFTDPSNATVVKFLSYISEDLANVADLVLHHVMLHVREQKKIHESFLSRWESRTYTSDEF 60
            MFTDPSN  +VKF SYISEDL NV DLVLHHV+LHVREQK+I ESFL+RWE R+Y+SDE+
Sbjct: 669  MFTDPSNPVIVKFFSYISEDLTNVVDLVLHHVLLHVREQKEIDESFLARWECRSYSSDEY 728

Query: 61   EEMQRSLFERLCPLLIIKMLPMKTFNDLNSSIMYGKLGQNVIHDSDSGDTETSYKCIANL 120
            EEMQR+LFE LCPLLIIKMLPMKTF++LNSS+MYG L QN  H S S   E  Y+CIA  
Sbjct: 729  EEMQRTLFEHLCPLLIIKMLPMKTFDNLNSSVMYGHLSQNKTHGSISRSAELDYECIAAF 788

Query: 121  LLNRAFCEFEFEDVRKLSAELCGRIHPQVLIPFVCSKLEVAMDSKDIVKIKACLFSICTS 180
            LLNRA CEFEFEDVRKLSAELCGRIHPQVL P +CSKL+ A+D K++ +IKACLFSICTS
Sbjct: 789  LLNRALCEFEFEDVRKLSAELCGRIHPQVLFPVICSKLDRAVDLKNVPEIKACLFSICTS 848

Query: 181  LVVRGWESLSHPSMLAIRRMIETVLLWPCLNADSVSKAQHGCIDCLALMICAELQAKESI 240
            LVVRGWESLSHP + +I+RMIETVLLWPCLNADSVSK QHGCIDCLALMI  ELQA+ESI
Sbjct: 849  LVVRGWESLSHPLVHSIKRMIETVLLWPCLNADSVSKVQHGCIDCLALMISVELQAEESI 908

Query: 241  KDSTPDRITVAEKK--GNSVVTYVIHQFVNDKEQ-ASIPELG----DGVAAVPLSFRLCM 293
             D  PDR+ V  KK  GNS++TYV++QF NDKE+ +S PELG    + VAAVPL FRLCM
Sbjct: 909  TDYMPDRVLVIGKKAAGNSIITYVMNQFFNDKEELSSTPELGEDKCESVAAVPLYFRLCM 968

Query: 294  GNVLISASQKISKSCKKRFAAQVLPFLLHSLEFEMKSEIRAACIQVLFSAVYHLGYAVLP 353
            GNVLIS  QKIS+SCKK FAAQVLPFLLHSL+FE +SEIRAACIQVLFSAVYHL  AVLP
Sbjct: 969  GNVLISTCQKISESCKKLFAAQVLPFLLHSLKFEKRSEIRAACIQVLFSAVYHLRSAVLP 1028

Query: 354  YASELLKISLKALRKESEKERMAGAKLIASLMASEDVILEKISGGLLEARXXXXXXXXXX 413
            YAS+LLKISLK+LRK+SEKERMAGAKLIASLMASEDVILE IS GLLEAR          
Sbjct: 1029 YASDLLKISLKSLRKKSEKERMAGAKLIASLMASEDVILENISVGLLEARSVLSTVSSSD 1088

Query: 414  XXXELRQLCSKLLACISSP 432
               EL+QLC KLLACISSP
Sbjct: 1089 PSHELQQLCRKLLACISSP 1107