Miyakogusa Predicted Gene

Lj1g3v4263380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4263380.1 Non Characterized Hit- tr|I1MLB7|I1MLB7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23489
PE,53.33,0.00004,no description,NULL,CUFF.32145.1
         (73 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g083720.2 | vacuolar H+-ATPase subunit C | HC | chr7:32230...    50   4e-07
Medtr7g083720.1 | vacuolar H+-ATPase subunit C | HC | chr7:32230...    50   4e-07

>Medtr7g083720.2 | vacuolar H+-ATPase subunit C | HC |
           chr7:32230841-32237569 | 20130731
          Length = 386

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/33 (72%), Positives = 28/33 (84%), Gaps = 2/33 (6%)

Query: 39  NDYALYTVTLFSHVADNFRNNAREKG--IQDFN 69
           N+YALYTVTLF+ VADNFR +AREKG  I+DF 
Sbjct: 221 NEYALYTVTLFNRVADNFRTSAREKGFQIRDFE 253


>Medtr7g083720.1 | vacuolar H+-ATPase subunit C | HC |
           chr7:32230841-32237569 | 20130731
          Length = 378

 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/33 (72%), Positives = 28/33 (84%), Gaps = 2/33 (6%)

Query: 39  NDYALYTVTLFSHVADNFRNNAREKG--IQDFN 69
           N+YALYTVTLF+ VADNFR +AREKG  I+DF 
Sbjct: 221 NEYALYTVTLFNRVADNFRTSAREKGFQIRDFE 253