Miyakogusa Predicted Gene

Lj1g3v4236970.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4236970.1 Non Characterized Hit- tr|D8SC56|D8SC56_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,30.72,0.00000000004,COMPLEMENT COMPONENT 1-RELATED,NULL;
COMPLEMENT COMPONENT 1,NULL; Mitochondrial glycoprotein
MAM33-l,CUFF.32097.1
         (239 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g091050.1 | glycoprotein family protein | HC | chr7:359180...   283   8e-77
Medtr7g091050.2 | glycoprotein family protein | HC | chr7:359180...   268   4e-72
Medtr5g093000.1 | glycoprotein family protein | HC | chr5:406019...    66   3e-11
Medtr7g063520.1 | glycoprotein family protein | HC | chr7:231645...    65   5e-11
Medtr5g080880.1 | glycoprotein family protein | HC | chr5:346392...    56   4e-08
Medtr1g013120.1 | glycoprotein family protein | HC | chr1:285829...    52   7e-07
Medtr4g006560.1 | glycoprotein family protein | HC | chr4:678633...    51   1e-06

>Medtr7g091050.1 | glycoprotein family protein | HC |
           chr7:35918096-35913571 | 20130731
          Length = 213

 Score =  283 bits (725), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 151/239 (63%), Positives = 180/239 (75%), Gaps = 26/239 (10%)

Query: 1   MARMRQLKKGFQAVQDLELLKLLRSEIHFELSENRFQVLSLFLSTTASNIFISLEIHAFS 60
           MAR R ++KG +A+QDLELLKLL+SEI+FELS N FQ                       
Sbjct: 1   MARARAVRKGLKALQDLELLKLLKSEINFELSSNHFQ----------------------- 37

Query: 61  WLQNAETGSLGEFVVDSDSRRTKDVILRRKCDSGEEVAVSAILGPPYFDKELVFPRDVFM 120
               A+TGSLGEFVVDSDS  +KDVILRRKC+SGEE+A+SAILGPP ++K+L+F RDVFM
Sbjct: 38  ---KAQTGSLGEFVVDSDSPNSKDVILRRKCNSGEEIALSAILGPPNYEKDLIFVRDVFM 94

Query: 121 KVCVKKPSLSSILQFDCEVYEETLHGSAFDIDNVYFLNSSTCLSSSVYRGPLFSELDINL 180
           KVC+KKP+LSSILQFDC+VY++    S FDI+N  +L S T LSSS+YRGPLFSEL+ NL
Sbjct: 95  KVCIKKPTLSSILQFDCKVYQKNDESSEFDINNACYLGSPTSLSSSIYRGPLFSELNNNL 154

Query: 181 QDAFKEYLIAKGIGLGLTNFLLHYLHTREQEQYVNWLKKVEAFVTTKESSSQFSEANST 239
           Q AFKEYLI KGIG  LTNFLLHYLHTREQ+QY NWLKK EAF++  +S +QFSE  S 
Sbjct: 155 QKAFKEYLIDKGIGGSLTNFLLHYLHTREQKQYANWLKKGEAFLSKNKSLNQFSETRSA 213


>Medtr7g091050.2 | glycoprotein family protein | HC |
           chr7:35918096-35913625 | 20130731
          Length = 178

 Score =  268 bits (684), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 126/178 (70%), Positives = 150/178 (84%)

Query: 62  LQNAETGSLGEFVVDSDSRRTKDVILRRKCDSGEEVAVSAILGPPYFDKELVFPRDVFMK 121
           +Q A+TGSLGEFVVDSDS  +KDVILRRKC+SGEE+A+SAILGPP ++K+L+F RDVFMK
Sbjct: 1   MQKAQTGSLGEFVVDSDSPNSKDVILRRKCNSGEEIALSAILGPPNYEKDLIFVRDVFMK 60

Query: 122 VCVKKPSLSSILQFDCEVYEETLHGSAFDIDNVYFLNSSTCLSSSVYRGPLFSELDINLQ 181
           VC+KKP+LSSILQFDC+VY++    S FDI+N  +L S T LSSS+YRGPLFSEL+ NLQ
Sbjct: 61  VCIKKPTLSSILQFDCKVYQKNDESSEFDINNACYLGSPTSLSSSIYRGPLFSELNNNLQ 120

Query: 182 DAFKEYLIAKGIGLGLTNFLLHYLHTREQEQYVNWLKKVEAFVTTKESSSQFSEANST 239
            AFKEYLI KGIG  LTNFLLHYLHTREQ+QY NWLKK EAF++  +S +QFSE  S 
Sbjct: 121 KAFKEYLIDKGIGGSLTNFLLHYLHTREQKQYANWLKKGEAFLSKNKSLNQFSETRSA 178


>Medtr5g093000.1 | glycoprotein family protein | HC |
           chr5:40601916-40605994 | 20130731
          Length = 221

 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 58/113 (51%)

Query: 118 VFMKVCVKKPSLSSILQFDCEVYEETLHGSAFDIDNVYFLNSSTCLSSSVYRGPLFSELD 177
           +F+ V V KP     L F C +YE+ L   +  +      +S   L+ + Y GP+F+ELD
Sbjct: 106 LFIHVDVSKPEQKESLNFLCGLYEDALGIHSVSMRPKLLDSSGYILTPTHYTGPVFAELD 165

Query: 178 INLQDAFKEYLIAKGIGLGLTNFLLHYLHTREQEQYVNWLKKVEAFVTTKESS 230
             ++DAF  Y+  +G+   L  FL  +L+ +E    + W K +  F+  K+ +
Sbjct: 166 EKMRDAFHSYIEERGVNDSLFKFLQAWLYVKEHRNLMRWFKTMGLFIDGKKQA 218


>Medtr7g063520.1 | glycoprotein family protein | HC |
           chr7:23164570-23167810 | 20130731
          Length = 254

 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 46/74 (62%)

Query: 151 IDNVYFLNSSTCLSSSVYRGPLFSELDINLQDAFKEYLIAKGIGLGLTNFLLHYLHTREQ 210
           ID++   N        +Y GP F++LD NLQ AF +YL  +GI    TNFL  Y+  ++ 
Sbjct: 179 IDSLSIKNPDESEDQLLYEGPEFTDLDENLQKAFLKYLEIRGITPNTTNFLQEYMFNKDN 238

Query: 211 EQYVNWLKKVEAFV 224
           ++Y+ WLKK+++F+
Sbjct: 239 KEYLGWLKKLKSFI 252


>Medtr5g080880.1 | glycoprotein family protein | HC |
           chr5:34639263-34644206 | 20130731
          Length = 331

 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 6/107 (5%)

Query: 118 VFMKVCVKKPSLSSILQFDCEVYEETLHGSAFDIDNVYFLNSSTCLSSSVYRGPLFSELD 177
           + + V V K    S L+F C  Y + +   +  + N  F +         Y GP F +LD
Sbjct: 153 IPLSVSVSKKDGPS-LEFSCVAYPDEIVIDSLSVKNPDFSDEQIP-----YDGPDFQDLD 206

Query: 178 INLQDAFKEYLIAKGIGLGLTNFLLHYLHTREQEQYVNWLKKVEAFV 224
             LQ +F +YL  +GI    TNFL  Y+  ++  +Y+ WL K++ F+
Sbjct: 207 EALQKSFHKYLEIRGIKPSTTNFLHEYMINKDSREYLVWLNKLKNFI 253


>Medtr1g013120.1 | glycoprotein family protein | HC |
           chr1:2858294-2861439 | 20130731
          Length = 233

 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 6/92 (6%)

Query: 133 LQFDCEVYEETLHGSAFDIDNVYFLNSSTCLSSSVYRGPLFSELDINLQDAFKEYLIAKG 192
           L+F C  + ++L     D+  V+ L     +S+  Y GP F  L   +++ F EYL A+G
Sbjct: 146 LEFVCSAWPDSL-----DVQKVFMLKRGK-MSTRPYLGPDFRNLKPKIREKFCEYLDARG 199

Query: 193 IGLGLTNFLLHYLHTREQEQYVNWLKKVEAFV 224
           +   L+ FL  Y+  +++ + + W+ ++++FV
Sbjct: 200 VNNELSAFLHEYMMNKDRIELLRWMDRLKSFV 231


>Medtr4g006560.1 | glycoprotein family protein | HC |
           chr4:678633-682789 | 20130731
          Length = 237

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 42/72 (58%)

Query: 156 FLNSSTCLSSSVYRGPLFSELDINLQDAFKEYLIAKGIGLGLTNFLLHYLHTREQEQYVN 215
            + ++  +++  Y GP F ELD  LQD+   +L  +GI   L  +L  Y+  +++ + + 
Sbjct: 166 LVRANKNMTAEPYAGPDFEELDDELQDSLYNFLEVRGINDELAKYLHQYMKHKDKTEIIG 225

Query: 216 WLKKVEAFVTTK 227
           W++KV++++  K
Sbjct: 226 WMEKVKSYIEKK 237