Miyakogusa Predicted Gene

Lj1g3v4226720.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4226720.1 tr|Q016B4|Q016B4_OSTTA Predicted membrane protein
(ISS) (Fragment) OS=Ostreococcus tauri
GN=Ot06g048,41.18,7e-19,TRANSMEMBRANE PROTEIN 14, 15,Uncharacterised
protein family UPF0136, Transmembrane; Tmemb_14,Unchara,CUFF.32078.1
         (229 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g090890.1 | transmembrane protein 14C | HC | chr7:35808207...   317   5e-87
Medtr7g073340.1 | non-green plastid inner envelope membrane prot...    81   8e-16
Medtr5g092160.1 | transmembrane protein 14C | HC | chr5:40248249...    73   3e-13

>Medtr7g090890.1 | transmembrane protein 14C | HC |
           chr7:35808207-35811560 | 20130731
          Length = 231

 Score =  317 bits (813), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 164/230 (71%), Positives = 186/230 (80%), Gaps = 9/230 (3%)

Query: 7   AAISHPHLCC----LHRSPYLRSRSLTYTPLR-SKLSVVMSLERQGADTAGSDAKNSLSY 61
           AA S  HL C    +HRS +L+SRSL     R SKLSV MSLE  GA+TA SD KN+LSY
Sbjct: 2   AATSQAHLFCFSATVHRSLHLKSRSLPCLTFRPSKLSVAMSLESHGAETANSDTKNTLSY 61

Query: 62  AADMTKLHVEEKQEPYSKKDNHDAEKAGLAE---EGVAQQQKKTAKIHDFCLGIPFGGFV 118
           A D +KL VEEKQE YS  + +  EK  L E   EGV  QQ +TAKIHDFC GIPFGG+V
Sbjct: 62  APDESKLKVEEKQESYSTVEENGTEKIVLGEAVQEGV-DQQNRTAKIHDFCFGIPFGGYV 120

Query: 119 LAGGIIGFLFSRSPATLSNGVLYGGALLFLSTFSLKVWKQGKSSLPFILGQAALSGILIW 178
             GGIIGFLFSR+PATL++GVL+GGALLFLSTFSLKVW+QGKSSLPFILGQAAL+GIL W
Sbjct: 121 TTGGIIGFLFSRNPATLASGVLFGGALLFLSTFSLKVWRQGKSSLPFILGQAALAGILFW 180

Query: 179 KNFQSYSLAKKLFPTGFTAIISSAMLCFYLYVLISGGNPPPKKLKPSASV 228
           KNFQSYSLAKK+FPTG +AIISSAML FY+YVL+SGGNPPPKKLKP+AS+
Sbjct: 181 KNFQSYSLAKKIFPTGISAIISSAMLVFYVYVLLSGGNPPPKKLKPTASI 230


>Medtr7g073340.1 | non-green plastid inner envelope membrane protein
           | HC | chr7:27402091-27407388 | 20130731
          Length = 310

 Score = 80.9 bits (198), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 91/190 (47%), Gaps = 9/190 (4%)

Query: 30  YTPLRSKLSVVMSLERQGADTAGSDAKNSLSYAADMTKLHVEEKQEPYSKKDNHDAEKAG 89
           Y     K  VV+    +        A++ LS  A   K   EE +E +S    +  E   
Sbjct: 116 YEVYSKKAIVVLQDTSEQLKIQADKARHDLSVVA---KEITEEGKEYFSSAAENSPEVKE 172

Query: 90  LAEEGVAQQQK--KTAKIHDFCLGIPFGGFVLAGGIIGFLFSRSPATLSNGVLYGGALLF 147
           + E   +      K + + DF +GIP+G  + AGG + F+ + S A +  GV+ GG LL 
Sbjct: 173 IVETFTSPDDDLSKVSGVRDFYVGIPYGLLLSAGGFLSFMITGSIAAIRFGVILGGVLLA 232

Query: 148 LSTFSLKVWKQGKSSLPFILGQAALSGILIWKNFQSYSLAKKLFPTGFTAIISSAMLCFY 207
           LS  SLK +K+G+ S   + GQ A++GIL  +             T FTA+IS A+  FY
Sbjct: 233 LSISSLKSYKKGQPSSLALKGQTAIAGILFLREISVLGRGS----TYFTALISGAVAAFY 288

Query: 208 LYVLISGGNP 217
           +Y L+  G P
Sbjct: 289 VYRLVLEGKP 298


>Medtr5g092160.1 | transmembrane protein 14C | HC |
           chr5:40248249-40245870 | 20130731
          Length = 121

 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 63/119 (52%)

Query: 105 IHDFCLGIPFGGFVLAGGIIGFLFSRSPATLSNGVLYGGALLFLSTFSLKVWKQGKSSLP 164
           +HDFC  IP+G  ++ GG+ GF+   S A+L+ GV  G  L+     SL  + + K+S  
Sbjct: 1   MHDFCFTIPYGLVLVGGGLFGFIHKGSTASLAGGVGTGLLLILAGYLSLNAFGKRKNSYL 60

Query: 165 FILGQAALSGILIWKNFQSYSLAKKLFPTGFTAIISSAMLCFYLYVLISGGNPPPKKLK 223
            +  +   +G+L W   Q Y    K+ P G  A +S+ M  FYLY L +GGN  P   K
Sbjct: 61  ALAIEILCAGVLTWIMGQRYLQTSKIMPAGMIAGLSALMTLFYLYKLATGGNHIPATAK 119