Miyakogusa Predicted Gene

Lj1g3v4226690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4226690.1 tr|G2XMG9|G2XMG9_ORYBR Hypothetical_protein
OS=Oryza brachyantha GN=Ob12g0074O16_11 PE=4
SV=1,50.56,1e-18,seg,NULL,CUFF.32075.1
         (341 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g090780.1 | hypothetical protein | HC | chr7:35762997-3576...   205   5e-53
Medtr7g090775.1 | hypothetical protein | HC | chr7:35756717-3575...   201   1e-51
Medtr7g090830.1 | hypothetical protein | LC | chr7:35790289-3578...   196   3e-50
Medtr7g090820.1 | RecA-like protein | LC | chr7:35787927-3578435...   189   4e-48
Medtr7g090860.1 | RecA-like protein | LC | chr7:35800572-3579613...   178   7e-45
Medtr7g090800.1 | hypothetical protein | LC | chr7:35767974-3576...   177   2e-44
Medtr7g090780.2 | hypothetical protein | HC | chr7:35762239-3576...   160   1e-39
Medtr1g051750.1 | hypothetical protein | LC | chr1:20616591-2061...   157   1e-38
Medtr3g023510.1 | PPR containing protein, putative | HC | chr3:7...   122   6e-28

>Medtr7g090780.1 | hypothetical protein | HC |
           chr7:35762997-35760012 | 20130731
          Length = 314

 Score =  205 bits (521), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 133/287 (46%), Positives = 152/287 (52%), Gaps = 48/287 (16%)

Query: 29  KPPLPQSNLHSTVPSWEKKFCYSAG-IPWRKLIECKKYMDLHSNVLHWDDSAGKEAFDNA 87
           KPPL   N   TVP WEKKFC S G +PWRK+IE KKYM LH NV++WDDSA KEAFDNA
Sbjct: 28  KPPL--DNRFPTVPLWEKKFCESVGSVPWRKVIEGKKYMYLHPNVVNWDDSAVKEAFDNA 85

Query: 88  KKRFWAKINGLPCGISLPDPDIYIDDVDWNSSVDPELILDLERERIFSDDEKRGGAEVVI 147
           K RFWA+IN  PC I LPDPD +IDDVDWN+SVDPEL  D+ERE     + +  G   VI
Sbjct: 86  KNRFWAEINEFPCDIPLPDPDTHIDDVDWNASVDPELYQDVEREAEARRNMEEKGEAAVI 145

Query: 148 IGGNLLYNNQVLTPTGWGDDDAEAPKPVILGGSLLLNNQTLTPTGWGDDEAEAPKPSDPN 207
           +G +LL N                                       ++E E  KPS+PN
Sbjct: 146 LGSSLLLNQS------------------------FSGPGWGPTGWGDEEEKEVTKPSEPN 181

Query: 208 SFAQGWDSNLHVNG-VNSWEQGYA-----------QNSQNDSQGWNQREQHYGGELQNKA 255
             AQGW+SN H N   NSWEQ  A           +N QND  GWNQ EQ YG +L NK 
Sbjct: 182 YAAQGWESNQHENNETNSWEQYRAPVVEHSKEYGWRNGQNDYHGWNQTEQ-YGADLHNKY 240

Query: 256 KXXXXXXXXXXXXXXXXXXXXXXRKRENMSWSHSNTSAAYHYGNEYQ 302
           +                      RKRENMSW  SN    YH  NEYQ
Sbjct: 241 Q------GRNGGHGNWGAWDGYNRKRENMSW--SNNPGHYHGTNEYQ 279


>Medtr7g090775.1 | hypothetical protein | HC |
           chr7:35756717-35755199 | 20130731
          Length = 278

 Score =  201 bits (510), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/279 (45%), Positives = 158/279 (56%), Gaps = 50/279 (17%)

Query: 38  HSTVPSWEKKFCYSAG-IPWRKLIECKKYMDLHSNVLHWDDSAGKEAFDNAKKRFWAKIN 96
           +  VP WEKKFC S G +PWRKLIE K+YM LH NV++WDDSA KEAF+NAK RFWA+IN
Sbjct: 15  YQAVPLWEKKFCASIGAVPWRKLIEVKRYMSLHPNVVNWDDSAVKEAFNNAKNRFWAEIN 74

Query: 97  GLPCGISLPDPDIYIDDVDWNSSVDPELILDLERERIFSDDEKRGGAEVVIIGGNLLYNN 156
           GLPC I LPDP+IY+DDVDWN+++DPEL LD+ERE +   + +  G E VI+  + L ++
Sbjct: 75  GLPCDIPLPDPNIYLDDVDWNATIDPELYLDVEREAVARRNIEEKGEEAVILSSSFLLSH 134

Query: 157 QVLTPTGWGDDDAEAPKPVILGGSLLLNNQTLTPTGWGDDEAEAPKPSDPNSFAQGWDSN 216
               P GWGD+                           +++ E  KPS+PN   QGW+SN
Sbjct: 135 SFSGP-GWGDE---------------------------EEKEEVRKPSEPNYAGQGWESN 166

Query: 217 LHVNG-VNSWEQGYA-----------QNSQNDSQGWNQREQHYGGELQNKAKXXXXXXXX 264
            H N   NSWEQ              QNS NDSQ W QRE HYGG+L NK +        
Sbjct: 167 QHENNETNSWEQYLPPIDEHAKQYGWQNSHNDSQRWIQRE-HYGGDLHNKYQ----QGRN 221

Query: 265 XXXXXXXXXXXXXXRKRENMSWSHSNTSAAYHYG-NEYQ 302
                         R+  NMSWS S  +   HYG NEYQ
Sbjct: 222 GGSGNWGTWDGYSRRRENNMSWSKSPEN---HYGNNEYQ 257


>Medtr7g090830.1 | hypothetical protein | LC |
           chr7:35790289-35789120 | 20130731
          Length = 289

 Score =  196 bits (497), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/283 (44%), Positives = 158/283 (55%), Gaps = 54/283 (19%)

Query: 34  QSNLHSTVPSWEKKFCYSAG-IPWRKLIECKKYMDLHSNVLHWDDSAGKEAFDNAKKRFW 92
           Q N   TVP WEKKFC S G +PWRK+IE KKYM LH NV++WDDSA KEAF+NAK RFW
Sbjct: 13  QHNWLPTVPLWEKKFCASIGSVPWRKIIEVKKYMCLHPNVVNWDDSAVKEAFNNAKNRFW 72

Query: 93  AKINGLPCGISLPDPDIYIDDVDWNSSVDPELILDLERERIFSDDEKRGGAEVVIIGGNL 152
           A+IN +PC I  PDP+IYIDD+DWN+SVD EL LD+ERE     + +  G EVVI+  +L
Sbjct: 73  AEINDIPCDIPSPDPNIYIDDIDWNASVDTELYLDVEREVEACRNIEEKGEEVVILSSSL 132

Query: 153 LYNNQVLTPTGWGDDDAEAPKPVILGGSLLLNNQTLTPTGWGDDEAEAPKPSDPNSFAQG 212
              +Q L+  GWGD++ E                            +  KP +PN  A+G
Sbjct: 133 FL-DQSLSGPGWGDEEDE----------------------------KLTKPYEPNDVARG 163

Query: 213 WDSNLHVNG-VNSWEQGYA-----------QNSQNDSQGWNQREQHYGGELQNKAKXXXX 260
           W+SN H N   N W+Q  A           +N QNDSQGWNQREQ YGG+  NK +    
Sbjct: 164 WESNQHGNNQKNFWKQYDAPIEHAAKEYGWKNGQNDSQGWNQREQ-YGGDFHNKYQ---- 218

Query: 261 XXXXXXXXXXXXXXXXXXRKRENMSWSHSNTSAAYHYG-NEYQ 302
                             R+  N+SWS   T+  Y +G NEYQ
Sbjct: 219 ---GRNSGNWGTWDGYNRRRENNISWS---TNPGYDHGTNEYQ 255


>Medtr7g090820.1 | RecA-like protein | LC | chr7:35787927-35784353 |
           20130731
          Length = 343

 Score =  189 bits (480), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/238 (50%), Positives = 146/238 (61%), Gaps = 52/238 (21%)

Query: 29  KPPLPQSNLHSTVPSWEKKFCYSAG-IPWRKLIECKKYMDLHSNVLHWDDSAGKEAFDNA 87
           KPPL  +N   TVPSWEKKFC S G +PWRK+IE  KYM LH  V++W+DSA KEAFDNA
Sbjct: 24  KPPL--ANRFPTVPSWEKKFCNSVGSVPWRKVIEGNKYMCLHPKVVNWNDSAVKEAFDNA 81

Query: 88  KKRFWAKINGLPCGISLPDPDIYIDDVDWNSSVDPELILDLERERIFSDDEKRGGAEVVI 147
           K RFWA+INGLPC I LPDP+IYIDDVDWN+S+D EL L++ERE      E R   +   
Sbjct: 82  KNRFWAEINGLPCNIPLPDPNIYIDDVDWNASIDSELYLEVEREA-----EARRNMD--- 133

Query: 148 IGGNLLYNNQVLTPTGWGDDDAEAPKPVILGGSLLLNNQTLTPTGWGDDEAEAPKPSDPN 207
                                 + P+ +++ GS LL NQ+L+  GWGD E    KPS+PN
Sbjct: 134 ----------------------QKPEEIVILGSSLLLNQSLSGPGWGDKEENVTKPSEPN 171

Query: 208 SFAQGWDSNLHVNGVNSWEQGYA-----------QNSQNDSQGWNQREQHYGGELQNK 254
             AQGW++       NSWEQ +A           +NSQNDSQ W QRE +YGG L NK
Sbjct: 172 YAAQGWET-------NSWEQYHAPVDEHAKEYGWKNSQNDSQRWIQRE-NYGGNLHNK 221


>Medtr7g090860.1 | RecA-like protein | LC | chr7:35800572-35796139 |
           20130731
          Length = 527

 Score =  178 bits (451), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 131/289 (45%), Positives = 158/289 (54%), Gaps = 53/289 (18%)

Query: 29  KPPLPQSNLHSTVPSWEKKFCYSAG-IPWRKLIECKKYMDLHSNVLHWDDSAGKEAFDNA 87
           KPPL   N   TVP WEK+FC S G +PWRKLIE K+YM +H  V++WDDSA KEAFDNA
Sbjct: 29  KPPL--DNRFPTVPLWEKQFCASVGSVPWRKLIEDKRYMYMHPKVVNWDDSAVKEAFDNA 86

Query: 88  KKRFWAKINGLPCGISLPDPDIYIDDVDWNSSVDPELILDLERERIFSDDEKRGGAEVVI 147
           K R+WA+ING+P  I LP+P+IYIDDVD N+SVD EL  D+E E     + K  G E  +
Sbjct: 87  KNRYWAEINGIPWDIPLPNPNIYIDDVDSNASVDSELHRDVEIEAEARHNIKEKG-EAAV 145

Query: 148 IGGNLLYNNQVLTPTGWGDDDAEAPKPVILGGSLLLNNQTLTPTGWGDDEAEA-PKPSDP 206
           I G+ L  NQ  +  G G                        PTGWGD+E E   KPS+P
Sbjct: 146 ILGSSLLLNQSSSGLGLG------------------------PTGWGDEEDEKLTKPSEP 181

Query: 207 NSFAQGWDSNLHVNG-VNSWEQGYA-----------QNSQNDSQGWNQREQHYGGELQNK 254
           N  A G +SN H N   N  EQ +A           QN QNDSQGWNQRE+ YGG+  NK
Sbjct: 182 NYAALGCESNQHENNETNLCEQYHAPVEHAAKEHGWQNGQNDSQGWNQRER-YGGDFHNK 240

Query: 255 AKXXXXXXXXXXXXXXXXXXXXXXRKRENMSWSHSNTSAAYHYG-NEYQ 302
            +                      +K  NMSWS    +  YH+G NEYQ
Sbjct: 241 YQ-------GRNSGNWGTWDGYNRKKENNMSWS---KNPGYHHGTNEYQ 279


>Medtr7g090800.1 | hypothetical protein | LC |
           chr7:35767974-35765813 | 20130731
          Length = 307

 Score =  177 bits (448), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/292 (40%), Positives = 159/292 (54%), Gaps = 57/292 (19%)

Query: 29  KPPLPQSNLHSTVPSWEKKFCYSAG-IPWRKLIECKKYMDLHSNVLHWDDSAGKEAFDNA 87
           KPPL +    ++VP WEKKFC + G + W+K+IE K++M LH  V++WDDSA KEAFDNA
Sbjct: 28  KPPLAKR--FASVPWWEKKFCATVGSVSWKKVIEGKRFMFLHPTVINWDDSAVKEAFDNA 85

Query: 88  KKRFWAKINGLPCGISLPDPDIYIDDVDWNSSVDPELILDLERERIFSDDEKRGGAEVVI 147
           K RFWA ING PC I LPDP+I+IDDVD  +SVDP+L LD+E E   SD+ +      +I
Sbjct: 86  KNRFWADINGFPCDIPLPDPNIHIDDVDSTASVDPQLYLDVESEAEASDNMEEKRDVTLI 145

Query: 148 IGGNLLYNNQV----LTPTGWGDDDAEAPKPVILGGSLLLNNQTLTPTGWGDDEAEAPKP 203
           I  +LL         + PTGWGD+                           +++ E  KP
Sbjct: 146 IDNSLLVKKSFADLGIVPTGWGDE---------------------------EEKDEVRKP 178

Query: 204 SDPNSFAQGWDSNLHVNG-VNSWEQGYA-----------QNSQNDSQGWNQREQHYGGEL 251
           S+PN  +QGW+ N H N   NSWE+ +A           +N QN+SQ   QRE+ +GG L
Sbjct: 179 SEPNYASQGWELNQHENDETNSWERYWASVDKRAKEYGWKNGQNNSQRRIQRER-FGGNL 237

Query: 252 QNKAKXXXXXXXXXXXXXXXXXXXXXXRKRENMSWSHSNTSAAYHYG-NEYQ 302
            NK +                      R+R+NMSWS    +  YH+G ++YQ
Sbjct: 238 HNKYQ------GRNGGSGNWGTWDGYNRRRDNMSWS---KNPGYHHGTSDYQ 280


>Medtr7g090780.2 | hypothetical protein | HC |
           chr7:35762239-35760012 | 20130731
          Length = 251

 Score =  160 bits (405), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/249 (43%), Positives = 125/249 (50%), Gaps = 45/249 (18%)

Query: 66  MDLHSNVLHWDDSAGKEAFDNAKKRFWAKINGLPCGISLPDPDIYIDDVDWNSSVDPELI 125
           M LH NV++WDDSA KEAFDNAK RFWA+IN  PC I LPDPD +IDDVDWN+SVDPEL 
Sbjct: 1   MYLHPNVVNWDDSAVKEAFDNAKNRFWAEINEFPCDIPLPDPDTHIDDVDWNASVDPELY 60

Query: 126 LDLERERIFSDDEKRGGAEVVIIGGNLLYNNQVLTPTGWGDDDAEAPKPVILGGSLLLNN 185
            D+ERE     + +  G   VI+G +LL N                              
Sbjct: 61  QDVEREAEARRNMEEKGEAAVILGSSLLLNQS------------------------FSGP 96

Query: 186 QTLTPTGWGDDEAEAPKPSDPNSFAQGWDSNLHVNG-VNSWEQGYA-----------QNS 233
                    ++E E  KPS+PN  AQGW+SN H N   NSWEQ  A           +N 
Sbjct: 97  GWGPTGWGDEEEKEVTKPSEPNYAAQGWESNQHENNETNSWEQYRAPVVEHSKEYGWRNG 156

Query: 234 QNDSQGWNQREQHYGGELQNKAKXXXXXXXXXXXXXXXXXXXXXXRKRENMSWSHSNTSA 293
           QND  GWNQ EQ YG +L NK +                      RKRENMSW  SN   
Sbjct: 157 QNDYHGWNQTEQ-YGADLHNKYQ------GRNGGHGNWGAWDGYNRKRENMSW--SNNPG 207

Query: 294 AYHYGNEYQ 302
            YH  NEYQ
Sbjct: 208 HYHGTNEYQ 216


>Medtr1g051750.1 | hypothetical protein | LC |
           chr1:20616591-20614664 | 20130731
          Length = 233

 Score =  157 bits (398), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/229 (42%), Positives = 123/229 (53%), Gaps = 46/229 (20%)

Query: 40  TVPSWEKKFCYS-AGIPWRKLIECKKYMDLHSNVLHWDDSAGKEAFDNAKKRFWAKINGL 98
            VP WEK FC S + I W +++E KKYM  ++N+++WDDSA KEAFDNAK RFWA INGL
Sbjct: 24  AVPRWEKLFCSSVSSITWERIVETKKYMCKYNNIVNWDDSAAKEAFDNAKSRFWADINGL 83

Query: 99  PCGISLPDPDIYIDDVDWNSSVDPELILDLERERIFSDDEKRGGAEVVIIGGNLLYNNQV 158
           PC I  PDPD+YIDD+DWNSSVDPEL+LDL+    F   E                    
Sbjct: 84  PCNIPFPDPDMYIDDIDWNSSVDPELLLDLDNVTTFPSQE-------------------- 123

Query: 159 LTPTGWGDDDAEAPKPVILGGSLLLNNQTLTPTGWGDDEAEAPKPSDPNSFAQGWDSNLH 218
                      E+ K V++ G     +Q++  +GW + E +A KP++   F  G   NLH
Sbjct: 124 -----------ESNKGVVIFGDAPFLDQSIPCSGWDEPEKDALKPAE---FVSGAQVNLH 169

Query: 219 VN-GVNSWEQG----YA------QNSQNDSQGWNQREQHYGGELQNKAK 256
            N  V   EQ     YA      Q   NDS GWN R+  + G   NK K
Sbjct: 170 ENKNVTPREQDDVPYYAAKESKRQKYGNDSLGWNHRQHSHIGGSWNKRK 218


>Medtr3g023510.1 | PPR containing protein, putative | HC |
           chr3:7136716-7132150 | 20130731
          Length = 365

 Score =  122 bits (305), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 55/112 (49%), Positives = 76/112 (67%), Gaps = 2/112 (1%)

Query: 29  KPPLPQSNLHSTVPSWEKKFCYSAG-IPWRKLIECKKYMDLHSNVLHWDDSAGKEAFDNA 87
           + PLP+   H  +P WEKK+C  +G +PW+K+++ K+ +  H NVL W DS  +EAF NA
Sbjct: 27  RAPLPEF-RHDGIPVWEKKYCTLSGCVPWQKIVDSKELIYCHHNVLDWKDSGAEEAFQNA 85

Query: 88  KKRFWAKINGLPCGISLPDPDIYIDDVDWNSSVDPELILDLERERIFSDDEK 139
           KKR+WA +N LPC ISLPDPD YI+ +DWN  +D ELI +L+       DE+
Sbjct: 86  KKRYWANVNNLPCDISLPDPDAYIEQIDWNPCIDAELIKELDNAFFTVPDEE 137