Miyakogusa Predicted Gene

Lj1g3v4157100.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4157100.1 Non Characterized Hit- tr|D5AB69|D5AB69_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,68.42,0.00005,seg,NULL,NODE_13245_length_1500_cov_52.554001.path2.1
         (294 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g110075.1 | transmembrane protein, putative | HC | chr3:50...   416   e-116

>Medtr3g110075.1 | transmembrane protein, putative | HC |
           chr3:50962931-50959535 | 20130731
          Length = 291

 Score =  416 bits (1068), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/292 (69%), Positives = 219/292 (75%), Gaps = 3/292 (1%)

Query: 1   MAIIGDALRQAFMPKREYESLREEEKAWGKLQRPXXXXXXXXXXXXXXXXXXXSLRIVFP 60
           M+II DALRQAFMPKREYESLREE+KAWGKLQRP                   SL+IVFP
Sbjct: 1   MSIISDALRQAFMPKREYESLREEQKAWGKLQRPVTISFVAIIWLAIIVSTVISLKIVFP 60

Query: 61  GSDARRPFCVDRRIQPLQIGAKGGGSDSSDLFPGAFYLTDQEMADYYWMVVFVPSMVLFL 120
           GSD +RPFCV R+IQ ++IG KGG    SDL PGAFYLTDQE+ADYYWMVVF+PS ++F+
Sbjct: 61  GSDGKRPFCV-RKIQSIEIGMKGG--SYSDLIPGAFYLTDQEIADYYWMVVFIPSFIVFV 117

Query: 121 LSAVYLVAGITVAYSAPTRHGCLKVVENNYCASRRGGVRCLSILNXXXXXXXXXXXXXXX 180
           LS VYL+AGITVAYSAPTRHGCLKVV+NNYCASRRGGVRCLSILN               
Sbjct: 118 LSGVYLIAGITVAYSAPTRHGCLKVVDNNYCASRRGGVRCLSILNLIFAIIFGLLALFLG 177

Query: 181 XXXXTFMSNCSTPLFWCYEVASWGFVVLYGGTAFFLRRKAAVILDEGSFSSRNLGLEMLE 240
               TFMSNCSTPLFWCYEVASWG  VLYGGTAFFLRRKAA+ILDEGSFS RNLGLEMLE
Sbjct: 178 SSLLTFMSNCSTPLFWCYEVASWGLAVLYGGTAFFLRRKAALILDEGSFSGRNLGLEMLE 237

Query: 241 ANPLEVTPEVERRVNEGFKTWMGXXXXXXXXXXXXXXXXXAPHLTHTNSNRQ 292
             PLEVTPEVERRVNEGFK WMG                 APHLTHTNSNRQ
Sbjct: 238 TTPLEVTPEVERRVNEGFKAWMGSSLLSSDEEDEPDSYEEAPHLTHTNSNRQ 289