Miyakogusa Predicted Gene

Lj1g3v4140640.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4140640.1 Non Characterized Hit- tr|I1JN48|I1JN48_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44466 PE,69.34,0,ATPase
domain of HSP90 chaperone/DNA topoisomerase II/histidine
kinase,ATPase-like, ATP-binding doma,CUFF.32001.1
         (273 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g089790.1 | DNA gyrase subunit B | HC | chr7:35184228-3517...   296   2e-80

>Medtr7g089790.1 | DNA gyrase subunit B | HC |
           chr7:35184228-35173250 | 20130731
          Length = 726

 Score =  296 bits (757), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 158/242 (65%), Positives = 168/242 (69%), Gaps = 10/242 (4%)

Query: 1   MAPVXXXXXXXXXFMASRYFFTASSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSQRK 60
           MAPV         FMASR FFT SS                              FS RK
Sbjct: 1   MAPVLLRRLPLLRFMASRTFFTPSS----------FRLHSSSSLPLSILSKPRKRFSLRK 50

Query: 61  WSICPLVPCSVTPKAYMSSVPAAEPSQKNESSKAYGSDQIQVLEGLDPVRKRPGMYIGST 120
           +S+  LV   VTP+AYMSS+ AAE   KN+SSKAYGSDQIQVLEGLDPVRKRPGMYIGST
Sbjct: 51  FSVPSLVSNGVTPRAYMSSLSAAEDIHKNDSSKAYGSDQIQVLEGLDPVRKRPGMYIGST 110

Query: 121 GPRGLHHLVYEILDNAVDEAQAGFASRIDVVLLADDSVSITDNGRGIPTDMHPTTNKSAL 180
           GPRGLHHLVYEILDNAVDEAQAGFAS+IDVVL ADDSVSI DNGRGIPTDMHPTT KSAL
Sbjct: 111 GPRGLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPTDMHPTTKKSAL 170

Query: 181 ETVLTVLHAGGKFGGAKXXXXXXXXXXXXXXXXXNALSEALEVTVWRDGMEYMQTYSRGK 240
           ETVLT+LHAGGKFGG                   NALSEALEVTVWR+G+EY QTYSRGK
Sbjct: 171 ETVLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQTYSRGK 230

Query: 241 PI 242
           P+
Sbjct: 231 PV 232