Miyakogusa Predicted Gene

Lj1g3v4118220.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4118220.3 Non Characterized Hit- tr|K3XIG9|K3XIG9_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si001691,35.97,2e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; FBOX,F-box domain, cyclin-like; A Recepto,CUFF.31968.3
         (166 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g089730.1 | F-box plant-like protein | LC | chr7:35146477-...   175   2e-44
Medtr7g089670.1 | F-box plant-like protein | HC | chr7:35123687-...   136   9e-33
Medtr7g089720.1 | F-box plant-like protein | LC | chr7:35139028-...   134   4e-32
Medtr7g089700.1 | F-box plant-like protein | LC | chr7:35131723-...   131   3e-31
Medtr6g039460.1 | F-box plant-like protein | HC | chr6:14278769-...   130   4e-31
Medtr5g089110.1 | F-box plant-like protein | HC | chr5:38730456-...   110   8e-25
Medtr1030s0010.1 | F-box plant-like protein | HC | scaffold1030:...   109   1e-24
Medtr5g089110.2 | F-box plant-like protein | HC | chr5:38730456-...   109   1e-24
Medtr3g436860.1 | F-box plant-like protein | HC | chr3:12403625-...   100   6e-22
Medtr3g436860.2 | F-box plant-like protein | HC | chr3:12403405-...   100   7e-22
Medtr3g436860.3 | F-box plant-like protein | HC | chr3:12402988-...   100   7e-22
Medtr7g089640.1 | F-box plant-like protein | HC | chr7:35109328-...    98   4e-21
Medtr6g039470.1 | F-box plant-like protein | LC | chr6:14285062-...    92   2e-19

>Medtr7g089730.1 | F-box plant-like protein | LC |
           chr7:35146477-35144993 | 20130731
          Length = 314

 Score =  175 bits (443), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 88/170 (51%), Positives = 112/170 (65%), Gaps = 10/170 (5%)

Query: 4   DHIDRSLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIVG 63
           + +  SLLN PE ILD IL+ LSPIELIKMS VC CLR+ CRSDH WE H+ QKWG ++G
Sbjct: 6   NSVSISLLNFPESILDGILERLSPIELIKMSEVCICLRNKCRSDHFWEIHMKQKWGRVIG 65

Query: 64  DFAFKEWQWHLTKFKSXXXXXXALLD------QNCSLGSFCGSCPLPCTGSYLQDFNQLR 117
             A KEWQWH+T   S      ++L+      QN SLGSF G+ P+ C GSY ++   L+
Sbjct: 66  HVALKEWQWHVT---SITAEEGSVLNQQINNIQNGSLGSFSGAWPMLCLGSYFEECTHLK 122

Query: 118 T-FLPNNSMLALYFSLQGGKFWFPAQFYRGPRVRDALFRHEPTSQTFTAR 166
           +  L NN  +ALY SL+ GKFWFPAQ +RG  V +AL  ++  + TF AR
Sbjct: 123 SLLLSNNFKMALYLSLESGKFWFPAQLFRGLYVHEALLSYDSKTDTFQAR 172


>Medtr7g089670.1 | F-box plant-like protein | HC |
           chr7:35123687-35121860 | 20130731
          Length = 318

 Score =  136 bits (343), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 70/161 (43%), Positives = 102/161 (63%), Gaps = 6/161 (3%)

Query: 9   SLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIVGDFAFK 68
           SLL+LPE  LDCIL+ LSP++L K++ VC+CLR+  ++D+LWE  +NQ+WG ++GD A+ 
Sbjct: 15  SLLDLPEWALDCILEYLSPLDLCKVAQVCSCLRNRSKNDYLWEKQVNQRWGELLGDIAYH 74

Query: 69  EWQWHLTKFKSXXXXXXALLDQN--CSLGSFCGSCPLPCTGSYLQDFNQLRTFLPNNSML 126
           EWQWH  K  +       LL QN   S G+F G  P     SYL++F  + + L N   +
Sbjct: 75  EWQWHTAKMVNEEIL---LLHQNQSGSCGTFTGVWPSLHLHSYLENFRDMISLLRNCPKM 131

Query: 127 ALYFSLQGGKFWFPAQFYRGP-RVRDALFRHEPTSQTFTAR 166
           +L+ +L+ G+FWFPAQ Y+      DAL  ++  + TF AR
Sbjct: 132 SLFIALETGQFWFPAQVYKKALSCYDALISYDSRNDTFKAR 172


>Medtr7g089720.1 | F-box plant-like protein | LC |
           chr7:35139028-35137263 | 20130731
          Length = 323

 Score =  134 bits (337), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 100/164 (60%), Gaps = 12/164 (7%)

Query: 9   SLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIVGDFAFK 68
           SLL+LP+ ++DCILK LSP +L +++ VCT LR+  R DHLWE H+ QKW  ++G+ A+ 
Sbjct: 20  SLLDLPDELVDCILKFLSPQDLFRVAQVCTHLRNISRRDHLWEKHVEQKWSRLLGNDAYH 79

Query: 69  EWQWHLTKFKSXXXXXXALLDQNC--SLGSFCGSCPLPCTGSYLQDFNQLRTFLPNNSML 126
           EW++H TK+K        L+DQN   SLG+  G+       SYL+    +   + N+S +
Sbjct: 80  EWEYHTTKYKEL------LVDQNLSDSLGTTSGNSSFQRIHSYLRINRSMTDLIKNHSKM 133

Query: 127 ALYFSLQGGKFWFPAQFYRGPRVR----DALFRHEPTSQTFTAR 166
           ALY  L+ G+FWFPAQ Y+   +     DA+  ++  + TF  R
Sbjct: 134 ALYIFLETGRFWFPAQVYKATLLTLYCYDAIVTYDSKTNTFQTR 177


>Medtr7g089700.1 | F-box plant-like protein | LC |
           chr7:35131723-35130047 | 20130731
          Length = 324

 Score =  131 bits (329), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 100/164 (60%), Gaps = 12/164 (7%)

Query: 9   SLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIVGDFAFK 68
           SLL+LP+ ++DCILK LSP +L +++ VCT LR+  R DHLWE H+ QKW  ++G+ A+ 
Sbjct: 21  SLLDLPDELVDCILKCLSPQDLFRVAQVCTHLRNISRRDHLWEKHVEQKWSRLLGNDAYH 80

Query: 69  EWQWHLTKFKSXXXXXXALLDQNC--SLGSFCGSCPLPCTGSYLQDFNQLRTFLPNNSML 126
           EW++H TK+K        L+D+N   SLG+  G+       SYL+    +   + N+S +
Sbjct: 81  EWEYHTTKYKEL------LVDRNLSDSLGTTSGNSSFQRIHSYLRINRSMTDLIKNHSKM 134

Query: 127 ALYFSLQGGKFWFPAQFYRGPRVR----DALFRHEPTSQTFTAR 166
           ALY  L+ G+FWFPAQ Y+   +     DA+  ++  + TF  R
Sbjct: 135 ALYIFLETGRFWFPAQVYKATLLTLHCYDAIVSYDSRTDTFQTR 178


>Medtr6g039460.1 | F-box plant-like protein | HC |
           chr6:14278769-14276701 | 20130731
          Length = 323

 Score =  130 bits (328), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 97/164 (59%), Gaps = 12/164 (7%)

Query: 9   SLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIVGDFAFK 68
           SLL+LP+ I+ CILK LSP +L ++S VC+ LR+  R D LWE H+ QKW  +VGD A+ 
Sbjct: 20  SLLDLPDEIVHCILKRLSPQDLYRISQVCSRLRNISRGDCLWEKHVEQKWSRLVGDDAYH 79

Query: 69  EWQWHLTKFKSXXXXXXALLDQNCS--LGSFCGSCPLPCTGSYLQDFNQLRTFLPNNSML 126
           EW++H TK+K        L+DQN S   G+  G  P     SYL+    L   + N+S +
Sbjct: 80  EWEYHTTKYKEL------LVDQNLSEPFGTISGDSPSQRLHSYLKINRTLIGLIKNHSKM 133

Query: 127 ALYFSLQGGKFWFPAQFYRGP----RVRDALFRHEPTSQTFTAR 166
           ALY  L+ G+FWFPAQ Y+         DA+  ++  + TF AR
Sbjct: 134 ALYILLETGRFWFPAQVYKATLQILYCYDAIVSYDSKTDTFRAR 177


>Medtr5g089110.1 | F-box plant-like protein | HC |
           chr5:38730456-38725757 | 20130731
          Length = 399

 Score =  110 bits (274), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 89/169 (52%), Gaps = 11/169 (6%)

Query: 9   SLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIVGDFAFK 68
           S+L+LPE +L+CIL+ L P  L +M+ VC  LR+ C SDHLWE H+ QKWG ++G  A++
Sbjct: 85  SVLDLPELVLECILEKLPPSSLCQMAGVCHSLRERCVSDHLWERHMKQKWGRVIGSVAYR 144

Query: 69  EWQWHLTKFK---SXXXXXXALLDQNCSLGSFCGSCPLPCTGSYLQDFNQLRTFLPNNSM 125
           EW+WH+   K   S        L +  SL        +    +Y    N+  ++LP +S 
Sbjct: 145 EWKWHVATKKNIGSLRHGKPRSLIKFMSLYWPFSWMRMKVDAAYSNSANKQNSYLPPDSF 204

Query: 126 LALYFSLQGGKFWFPAQFYRGPRVR--------DALFRHEPTSQTFTAR 166
           +  Y +L+ G F FPAQ Y              DA   ++P + TF AR
Sbjct: 205 MTWYLALETGNFSFPAQVYNRENGHVGFMLSCYDAELSYDPRTDTFQAR 253


>Medtr1030s0010.1 | F-box plant-like protein | HC |
           scaffold1030:2809-3176 | 20130731
          Length = 122

 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)

Query: 21  ILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIVGDFAFKEWQWHLTKFKSX 80
           ILK LSP +LI++S VC+ LR+  R D +WE H+ QKW  +VGD A+ EW++H TK K  
Sbjct: 2   ILKRLSPQDLIRLSQVCSRLRNISRGDCMWEKHVEQKWSRLVGDDAYHEWKYHTTKCKEL 61

Query: 81  XXXXXALLDQNCS--LGSFCGSCPLPCTGSYLQDFNQLRTFLPNNSMLALYFSLQGGKFW 138
                 L+DQN S   G+  G  P     SYL+    L   + N+S +ALY  L+ G+FW
Sbjct: 62  ------LVDQNLSEPFGTISGDSPSQRLHSYLKINRTLIGLIKNHSKMALYIFLETGRFW 115

Query: 139 FPAQFYR 145
           FPAQ Y+
Sbjct: 116 FPAQVYK 122


>Medtr5g089110.2 | F-box plant-like protein | HC |
           chr5:38730456-38725757 | 20130731
          Length = 347

 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 89/169 (52%), Gaps = 11/169 (6%)

Query: 9   SLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIVGDFAFK 68
           S+L+LPE +L+CIL+ L P  L +M+ VC  LR+ C SDHLWE H+ QKWG ++G  A++
Sbjct: 85  SVLDLPELVLECILEKLPPSSLCQMAGVCHSLRERCVSDHLWERHMKQKWGRVIGSVAYR 144

Query: 69  EWQWHLTKFK---SXXXXXXALLDQNCSLGSFCGSCPLPCTGSYLQDFNQLRTFLPNNSM 125
           EW+WH+   K   S        L +  SL        +    +Y    N+  ++LP +S 
Sbjct: 145 EWKWHVATKKNIGSLRHGKPRSLIKFMSLYWPFSWMRMKVDAAYSNSANKQNSYLPPDSF 204

Query: 126 LALYFSLQGGKFWFPAQFYRGPRVR--------DALFRHEPTSQTFTAR 166
           +  Y +L+ G F FPAQ Y              DA   ++P + TF AR
Sbjct: 205 MTWYLALETGNFSFPAQVYNRENGHVGFMLSCYDAELSYDPRTDTFQAR 253


>Medtr3g436860.1 | F-box plant-like protein | HC |
           chr3:12403625-12408078 | 20130731
          Length = 335

 Score =  100 bits (249), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 90/179 (50%), Gaps = 16/179 (8%)

Query: 1   MEEDHIDRSLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGT 60
           +EE     SLL+LPE IL+CIL+ L P  L +M+ +C  LR+ C SD+ WE H+ +KWG 
Sbjct: 15  VEEIEDKLSLLDLPELILECILEKLPPSSLCQMAGICHSLRERCVSDYFWERHMKKKWGG 74

Query: 61  IVGDFAFKEWQWHLTKFKSXXXXXXALLDQNCSLGSFCGSCPLPCTGSYLQ-----DFNQ 115
           ++G  A++EW+WH+    S          +   L     S   P  G  L+     D   
Sbjct: 75  VIGQAAYREWKWHVA---SNMGVGSLKHGKQSGLWMKIFSLLWPFQGMKLKVGDGNDSCN 131

Query: 116 LRTFLPNNSMLALYFSLQGGKFWFPAQFYRGPRVR--------DALFRHEPTSQTFTAR 166
            R+ LP  +++  Y +++ G+FWFPAQ Y              DA   ++  + TF AR
Sbjct: 132 HRSSLPVEAVMNWYLAIETGRFWFPAQVYNRENGHLGFLLSCYDAELSYDSRTNTFLAR 190


>Medtr3g436860.2 | F-box plant-like protein | HC |
           chr3:12403405-12408412 | 20130731
          Length = 378

 Score =  100 bits (249), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 90/179 (50%), Gaps = 16/179 (8%)

Query: 1   MEEDHIDRSLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGT 60
           +EE     SLL+LPE IL+CIL+ L P  L +M+ +C  LR+ C SD+ WE H+ +KWG 
Sbjct: 80  VEEIEDKLSLLDLPELILECILEKLPPSSLCQMAGICHSLRERCVSDYFWERHMKKKWGG 139

Query: 61  IVGDFAFKEWQWHLTKFKSXXXXXXALLDQNCSLGSFCGSCPLPCTGSYLQ-----DFNQ 115
           ++G  A++EW+WH+    S          +   L     S   P  G  L+     D   
Sbjct: 140 VIGQAAYREWKWHVA---SNMGVGSLKHGKQSGLWMKIFSLLWPFQGMKLKVGDGNDSCN 196

Query: 116 LRTFLPNNSMLALYFSLQGGKFWFPAQFYRGPRVR--------DALFRHEPTSQTFTAR 166
            R+ LP  +++  Y +++ G+FWFPAQ Y              DA   ++  + TF AR
Sbjct: 197 HRSSLPVEAVMNWYLAIETGRFWFPAQVYNRENGHLGFLLSCYDAELSYDSRTNTFLAR 255


>Medtr3g436860.3 | F-box plant-like protein | HC |
           chr3:12402988-12406347 | 20130731
          Length = 378

 Score =  100 bits (249), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 90/179 (50%), Gaps = 16/179 (8%)

Query: 1   MEEDHIDRSLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGT 60
           +EE     SLL+LPE IL+CIL+ L P  L +M+ +C  LR+ C SD+ WE H+ +KWG 
Sbjct: 80  VEEIEDKLSLLDLPELILECILEKLPPSSLCQMAGICHSLRERCVSDYFWERHMKKKWGG 139

Query: 61  IVGDFAFKEWQWHLTKFKSXXXXXXALLDQNCSLGSFCGSCPLPCTGSYLQ-----DFNQ 115
           ++G  A++EW+WH+    S          +   L     S   P  G  L+     D   
Sbjct: 140 VIGQAAYREWKWHVA---SNMGVGSLKHGKQSGLWMKIFSLLWPFQGMKLKVGDGNDSCN 196

Query: 116 LRTFLPNNSMLALYFSLQGGKFWFPAQFYRGPRVR--------DALFRHEPTSQTFTAR 166
            R+ LP  +++  Y +++ G+FWFPAQ Y              DA   ++  + TF AR
Sbjct: 197 HRSSLPVEAVMNWYLAIETGRFWFPAQVYNRENGHLGFLLSCYDAELSYDSRTNTFLAR 255


>Medtr7g089640.1 | F-box plant-like protein | HC |
           chr7:35109328-35106604 | 20130731
          Length = 394

 Score = 97.8 bits (242), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 81/155 (52%), Gaps = 12/155 (7%)

Query: 20  CILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIVGDFAFKEWQWHLTKFKS 79
           CIL+ LSP EL  ++ VC  LR+ CRSD+LWE H+  KWG I+GD A+++W+ ++   KS
Sbjct: 100 CILEKLSPSELCNVAQVCKSLREKCRSDYLWEKHMKMKWGKILGDSAYRQWKCYVAS-KS 158

Query: 80  XXXXXXALLDQNCSLGSFCGSCPLPCTGSYLQDFNQLRTFLPNNSMLALYFSLQGGKFWF 139
                    +Q   L       P     S  + + + R   P++S+ ALY SL+ GKFWF
Sbjct: 159 IEKNSNQHKNQKTVLAFLHAFLPFFWIKSKSEKYIKSR---PDDSIAALYLSLENGKFWF 215

Query: 140 PAQFYRGPRVR--------DALFRHEPTSQTFTAR 166
           PAQ Y              DA   ++  + TF AR
Sbjct: 216 PAQVYNRENGHAGFLLSCYDAELCYDSRTDTFQAR 250


>Medtr6g039470.1 | F-box plant-like protein | LC |
           chr6:14285062-14283530 | 20130731
          Length = 246

 Score = 92.0 bits (227), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 75/127 (59%), Gaps = 8/127 (6%)

Query: 9   SLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIVGDFAFK 68
           SLL+L + ++ CI+K LS  +L +++ VCT LR+  RSD+LWE H+ QKW  +VG+ A+ 
Sbjct: 92  SLLDLSDEVVHCIIKHLSSQDLFRIAQVCTNLRNMSRSDYLWEKHVEQKWSMLVGNDAYH 151

Query: 69  EWQWHLTKFKSXXXXXXALLDQNC--SLGSFCGSCPLPCTGSYLQDFNQLRTFLPNNSML 126
           EW++H TK+K        L+DQN   S G+  G        SYL+    L  F+ N+S  
Sbjct: 152 EWEYHTTKYKGL------LVDQNLRRSSGTISGDSFFRRHHSYLKSNRSLIAFIKNHSKW 205

Query: 127 ALYFSLQ 133
              FSL+
Sbjct: 206 LCIFSLR 212