Miyakogusa Predicted Gene

Lj1g3v4118220.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4118220.2 Non Characterized Hit- tr|B6EDA1|B6EDA1_TRIUA
Putative cyclin-like F-box (Fragment) OS=Triticum
urar,46.43,0.0000000000001,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.31968.2
         (226 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g089670.1 | F-box plant-like protein | HC | chr7:35123687-...   306   1e-83
Medtr7g089730.1 | F-box plant-like protein | LC | chr7:35146477-...   218   5e-57
Medtr7g089700.1 | F-box plant-like protein | LC | chr7:35131723-...   204   5e-53
Medtr6g039460.1 | F-box plant-like protein | HC | chr6:14278769-...   204   8e-53
Medtr7g089720.1 | F-box plant-like protein | LC | chr7:35139028-...   198   4e-51
Medtr7g089640.1 | F-box plant-like protein | HC | chr7:35109328-...   196   1e-50
Medtr3g436860.1 | F-box plant-like protein | HC | chr3:12403625-...   181   7e-46
Medtr5g089110.1 | F-box plant-like protein | HC | chr5:38730456-...   178   3e-45
Medtr3g436860.2 | F-box plant-like protein | HC | chr3:12403405-...   139   2e-33
Medtr3g436860.3 | F-box plant-like protein | HC | chr3:12402988-...   139   2e-33
Medtr5g089110.2 | F-box plant-like protein | HC | chr5:38730456-...   132   2e-31
Medtr1030s0010.1 | F-box plant-like protein | HC | scaffold1030:...    62   5e-10

>Medtr7g089670.1 | F-box plant-like protein | HC |
           chr7:35123687-35121860 | 20130731
          Length = 318

 Score =  306 bits (784), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 146/227 (64%), Positives = 186/227 (81%), Gaps = 5/227 (2%)

Query: 1   MLLQNQSKRTCGSFSGVWPSLSLHSYLENFGDLTSLFQKYSKMALLVCLESGRFWFPAQV 60
           +L QNQS  +CG+F+GVWPSL LHSYLENF D+ SL +   KM+L + LE+G+FWFPAQV
Sbjct: 90  LLHQNQSG-SCGTFTGVWPSLHLHSYLENFRDMISLLRNCPKMSLFIALETGQFWFPAQV 148

Query: 61  YKRVPLYCYDAIVSYDSKTDTFRARSPNNGWRMIEGNIEWDRLRSSPVENFSRKFYLSD- 119
           YK+  L CYDA++SYDS+ DTF+ARSP+NGWR I G++EWD LR  P + F   +Y  + 
Sbjct: 149 YKKA-LSCYDALISYDSRNDTFKARSPSNGWR-IRGDVEWDMLRIPPPQTFLSDYYKPNY 206

Query: 120 MNDLKPGDHIEIQKRKRKEYPYDWWFAIVGHLESCDENVNHCLCQQSDMLVVEFKQYQHG 179
           +N+LKPGD++E+QKR+RKEYPYDWWFAI+GHLESCDE++NHC CQ S+ LVVE   Y  G
Sbjct: 207 INNLKPGDYVEVQKRRRKEYPYDWWFAIIGHLESCDEDMNHCHCQYSETLVVELILYALG 266

Query: 180 SRWRRSVLNRNVYEEQGSRLCWMGGIRKLDKEEEIERWNSLLSSRNN 226
           SRWRRS+L+RN+YEEQGSR+CW GGIRKL+ EEEIE+WN++L SR +
Sbjct: 267 SRWRRSMLHRNLYEEQGSRICWFGGIRKLN-EEEIEKWNNILLSRQD 312


>Medtr7g089730.1 | F-box plant-like protein | LC |
           chr7:35146477-35144993 | 20130731
          Length = 314

 Score =  218 bits (554), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 116/225 (51%), Positives = 151/225 (67%), Gaps = 5/225 (2%)

Query: 3   LQNQSKRTCGSFSGVWPSLSLHSYLENFGDLTSLFQKYS-KMALLVCLESGRFWFPAQVY 61
           + N    + GSFSG WP L L SY E    L SL    + KMAL + LESG+FWFPAQ++
Sbjct: 91  INNIQNGSLGSFSGAWPMLCLGSYFEECTHLKSLLLSNNFKMALYLSLESGKFWFPAQLF 150

Query: 62  KRVPLYCYDAIVSYDSKTDTFRARSPNNGWRMIEGNIEWDRLRSSPVENFSRKFYLSDM- 120
           +   LY ++A++SYDSKTDTF+AR+ +  WR++   I WD+LR S VE  S   ++SD  
Sbjct: 151 R--GLYVHEALLSYDSKTDTFQARTRSGNWRIVGNKIHWDKLRPSLVETSSCVRHVSDCY 208

Query: 121 NDLKPGDHIEIQKRKRKEYPYDWWFAIVGHLESCDENVNHCLCQQSDMLVVEFKQYQHGS 180
            DLK GDHIEIQ R   + PYDWW+A++GHL+SC+EN N+C CQ S+ LVVEFKQY  GS
Sbjct: 209 QDLKLGDHIEIQWRGNTQTPYDWWYAVIGHLDSCNENENYCFCQNSETLVVEFKQYPRGS 268

Query: 181 RWRRSVLNRNVYEEQG-SRLCWMGGIRKLDKEEEIERWNSLLSSR 224
             R+++L R+   EQ  + +   GGIRKL  EEEIE+W  LL  R
Sbjct: 269 SMRKTMLRRHNNGEQAENSIGNYGGIRKLRDEEEIEKWKELLDHR 313


>Medtr7g089700.1 | F-box plant-like protein | LC |
           chr7:35131723-35130047 | 20130731
          Length = 324

 Score =  204 bits (519), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 110/230 (47%), Positives = 151/230 (65%), Gaps = 7/230 (3%)

Query: 1   MLLQNQSKRTCGSFSGVWPSLSLHSYLENFGDLTSLFQKYSKMALLVCLESGRFWFPAQV 60
           +L+      + G+ SG      +HSYL     +T L + +SKMAL + LE+GRFWFPAQV
Sbjct: 92  LLVDRNLSDSLGTTSGNSSFQRIHSYLRINRSMTDLIKNHSKMALYIFLETGRFWFPAQV 151

Query: 61  YKR--VPLYCYDAIVSYDSKTDTFRARSPNNGWRMIEGNIEWDRLRSSPVENFSRKFY-L 117
           YK   + L+CYDAIVSYDS+TDTF+ R P    R+IE +I WD LR  P + +   +Y  
Sbjct: 152 YKATLLTLHCYDAIVSYDSRTDTFQTRCPYGRKRLIERDISWDMLRMPPPKTYLVDYYEY 211

Query: 118 SDMNDLKPGDHIEIQKRKRKEYP-YDWWFAIVGHLESCDENVNHCLCQQSDMLVVEFKQY 176
           +D+N+LKPGDHIEIQKR R+ +P YDW  A+V HLESCD++VNHC C+ SD+LV+ F + 
Sbjct: 212 NDLNNLKPGDHIEIQKRGRRLFPIYDWAHAVVCHLESCDQDVNHCSCKDSDILVMGFSRC 271

Query: 177 QHGSRWRRSVLNRNVYEEQGSRLCWMGGIRKLDKEEEIERWNSLLSSRNN 226
                +  S+     + E      ++ GIRKLD EEEIE+WN+++ +RNN
Sbjct: 272 NFHLEY--SLSKSTKHAEAYREFNFLNGIRKLD-EEEIEKWNNVILTRNN 318


>Medtr6g039460.1 | F-box plant-like protein | HC |
           chr6:14278769-14276701 | 20130731
          Length = 323

 Score =  204 bits (518), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 116/233 (49%), Positives = 151/233 (64%), Gaps = 14/233 (6%)

Query: 1   MLLQNQSKRTCGSFSGVWPSLSLHSYLENFGDLTSLFQKYSKMALLVCLESGRFWFPAQV 60
           +L+        G+ SG  PS  LHSYL+    L  L + +SKMAL + LE+GRFWFPAQV
Sbjct: 91  LLVDQNLSEPFGTISGDSPSQRLHSYLKINRTLIGLIKNHSKMALYILLETGRFWFPAQV 150

Query: 61  YKRV--PLYCYDAIVSYDSKTDTFRARSPNNGWRMIEGNIEWDRLRSSPVENFSRKFY-L 117
           YK     LYCYDAIVSYDSKTDTFRARSPN G + I+G+I WD LR  P + F   +Y  
Sbjct: 151 YKATLQILYCYDAIVSYDSKTDTFRARSPNLGRQWIQGDIPWDMLRIPPPKTFLVDYYEY 210

Query: 118 SDMNDLKPGDHIEIQKRKRKEYPY-DWWFAIVGHLESCDENVNHCLCQQSDMLVVEFKQY 176
           +D+++LKPGD IEIQKR+R  +P  DW   IV HLESC E+VN+C CQ+SD L +    +
Sbjct: 211 TDLDELKPGDLIEIQKRRRIGFPICDWAHGIVFHLESCYEDVNNCSCQKSDTLTMGI--F 268

Query: 177 QHGSR----WRRSVLNRNVYEEQGSRLCWMGGIRKLDKEEEIERWNSLLSSRN 225
           +  SR      +S+ ++N Y E      ++ GIRK   EEEIE+WN L+++ N
Sbjct: 269 KCNSRKDYVMSKSMKHKNAYRE----FNFLKGIRKSLDEEEIEKWNDLITTNN 317


>Medtr7g089720.1 | F-box plant-like protein | LC |
           chr7:35139028-35137263 | 20130731
          Length = 323

 Score =  198 bits (503), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 105/231 (45%), Positives = 156/231 (67%), Gaps = 9/231 (3%)

Query: 1   MLLQNQSKRTCGSFSGVWPSLSLHSYLENFGDLTSLFQKYSKMALLVCLESGRFWFPAQV 60
           +L+      + G+ SG      +HSYL     +T L + +SKMAL + LE+GRFWFPAQV
Sbjct: 91  LLVDQNLSDSLGTTSGNSSFQRIHSYLRINRSMTDLIKNHSKMALYIFLETGRFWFPAQV 150

Query: 61  YKR--VPLYCYDAIVSYDSKTDTFRARSPNNGWRMIEGNIEWDRLRSSPVENFSRKFY-L 117
           YK   + LYCYDAIV+YDSKT+TF+ R+P+   R+IE +I W+ LR  P + +   +Y  
Sbjct: 151 YKATLLTLYCYDAIVTYDSKTNTFQTRTPHGRRRVIERDIPWNMLRMPPPKTYLVDYYEY 210

Query: 118 SDMNDLKPGDHIEIQKRKRKEYP-YDWWFAIVGHLESCDENVNHCLCQQSDMLVVEFKQY 176
           +D+N+LKPGD+IEIQ R RK +P YDW  A+V HLESCD++VNHC C+ +D+LV+ F + 
Sbjct: 211 NDLNNLKPGDYIEIQTRGRKAFPLYDWAHAVVCHLESCDQDVNHCSCKDNDILVMGFSR- 269

Query: 177 QHGSRWRRSVLNRNVYEEQG-SRLCWMGGIRKLDKEEEIERWNSLLSSRNN 226
              + ++   L++++   Q      ++ GIRKL+ E+EIE+WN+++ +RNN
Sbjct: 270 --CNFYKEYSLSKSMKHAQAYVEFNFLNGIRKLN-EQEIEKWNNVILTRNN 317


>Medtr7g089640.1 | F-box plant-like protein | HC |
           chr7:35109328-35106604 | 20130731
          Length = 394

 Score =  196 bits (499), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 100/218 (45%), Positives = 144/218 (66%), Gaps = 16/218 (7%)

Query: 23  LHSYLENFGDLTSLFQKYSK-------MALLVCLESGRFWFPAQVYKR------VPLYCY 69
           LH++L  F  + S  +KY K        AL + LE+G+FWFPAQVY R        L CY
Sbjct: 176 LHAFLPFFW-IKSKSEKYIKSRPDDSIAALYLSLENGKFWFPAQVYNRENGHAGFLLSCY 234

Query: 70  DAIVSYDSKTDTFRARSPNNGWRMIEGNIEWDRLRSSPVENFSRKFYLSD-MNDLKPGDH 128
           DA + YDS+TDTF+AR   +G    E NI+W+RLR  P+++ S   ++SD ++DLKPGDH
Sbjct: 235 DAELCYDSRTDTFQARYSPHGRWTTEENIKWERLRVPPIDSSSHVLHISDCLDDLKPGDH 294

Query: 129 IEIQKRKRKEYPYDWWFAIVGHLESCDENVNHCLCQQSDMLVVEFKQYQHGSRWRRSVLN 188
           +EIQ R+  E+PY WW++++GHLE+C  + NHC C   D +++EF QY  GSRWR++++N
Sbjct: 295 VEIQWRRNNEFPYGWWYSVIGHLETCQGDGNHCQCHDKDTVILEFTQYTAGSRWRQTMIN 354

Query: 189 RNVYEEQGSRL-CWMGGIRKLDKEEEIERWNSLLSSRN 225
           R  + EQG+ +  + GGIRKL  +EEI +W  L  ++N
Sbjct: 355 RKNHREQGNEIEGFYGGIRKLHSKEEITKWKKLWPTKN 392


>Medtr3g436860.1 | F-box plant-like protein | HC |
           chr3:12403625-12408078 | 20130731
          Length = 335

 Score =  181 bits (458), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 96/223 (43%), Positives = 138/223 (61%), Gaps = 12/223 (5%)

Query: 14  FSGVWPSLSLHSYLENFGDLT---SLFQKYSKMALLVCLESGRFWFPAQVYKR------V 64
           FS +WP   +   + +  D     S     + M   + +E+GRFWFPAQVY R       
Sbjct: 110 FSLLWPFQGMKLKVGDGNDSCNHRSSLPVEAVMNWYLAIETGRFWFPAQVYNRENGHLGF 169

Query: 65  PLYCYDAIVSYDSKTDTFRARSPNNGWRMI-EGNIEWDRLRSSPVENFSRKFYLSD-MND 122
            L CYDA +SYDS+T+TF AR P++G R   E  I W+R+R+ PV+      ++S+ +ND
Sbjct: 170 LLSCYDAELSYDSRTNTFLARYPSHGRREARECGIPWERIRAPPVDISPHDLHISNCLND 229

Query: 123 LKPGDHIEIQKRKRKEYPYDWWFAIVGHLESCDENVNHCLCQQSDMLVVEFKQYQHGSRW 182
           L PG+HIEIQ R++KE+PY WW+ +VGHLESC+ N NHC C  SD +++EF  Y  GSRW
Sbjct: 230 LHPGNHIEIQWRRKKEFPYGWWYGVVGHLESCNNNENHCRCHNSDSVMIEFNHYTPGSRW 289

Query: 183 RRSVLNRNVYEEQGSRL-CWMGGIRKLDKEEEIERWNSLLSSR 224
           R++ +NR  + E+G+    + GGIRK++   EI  W  +  S+
Sbjct: 290 RQTSINRKDHREEGNEADGFYGGIRKIESLNEISIWKRMWPSK 332


>Medtr5g089110.1 | F-box plant-like protein | HC |
           chr5:38730456-38725757 | 20130731
          Length = 399

 Score =  178 bits (452), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 92/193 (47%), Positives = 124/193 (64%), Gaps = 10/193 (5%)

Query: 41  SKMALLVCLESGRFWFPAQVYKR------VPLYCYDAIVSYDSKTDTFRARSPNNGWRM- 93
           S M   + LE+G F FPAQVY R        L CYDA +SYD +TDTF+AR P +G R  
Sbjct: 203 SFMTWYLALETGNFSFPAQVYNRENGHVGFMLSCYDAELSYDPRTDTFQARYPPHGRRAA 262

Query: 94  -IEGNIEWDRLRSSPVENFSRKFYLSD-MNDLKPGDHIEIQKRKRKEYPYDWWFAIVGHL 151
            +E  I W+RLR+ PV+      ++++ ++DL  GDHIEIQ R+ K++PY WW+ IVGHL
Sbjct: 263 AVEHGIPWERLRAPPVDTPPHDLHITECLHDLHAGDHIEIQWRRNKDFPYGWWYGIVGHL 322

Query: 152 ESCDENVNHCLCQQSDMLVVEFKQYQHGSRWRRSVLNRNVYEEQGSRL-CWMGGIRKLDK 210
           ESCD N N+C C  SD +V+EF QY   SRWRR+ +NR  + E+G+    + GG+RK+  
Sbjct: 323 ESCDGNENYCRCHNSDTVVLEFNQYTSDSRWRRTTINRKDHREEGNEADGFYGGVRKIKN 382

Query: 211 EEEIERWNSLLSS 223
           E+EI  W  L  S
Sbjct: 383 EKEISIWKGLWPS 395


>Medtr3g436860.2 | F-box plant-like protein | HC |
           chr3:12403405-12408412 | 20130731
          Length = 378

 Score =  139 bits (350), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/132 (51%), Positives = 91/132 (68%), Gaps = 8/132 (6%)

Query: 43  MALLVCLESGRFWFPAQVYKR------VPLYCYDAIVSYDSKTDTFRARSPNNGWRMI-E 95
           M   + +E+GRFWFPAQVY R        L CYDA +SYDS+T+TF AR P++G R   E
Sbjct: 207 MNWYLAIETGRFWFPAQVYNRENGHLGFLLSCYDAELSYDSRTNTFLARYPSHGRREARE 266

Query: 96  GNIEWDRLRSSPVENFSRKFYLSD-MNDLKPGDHIEIQKRKRKEYPYDWWFAIVGHLESC 154
             I W+R+R+ PV+      ++S+ +NDL PG+HIEIQ R++KE+PY WW+ +VGHLESC
Sbjct: 267 CGIPWERIRAPPVDISPHDLHISNCLNDLHPGNHIEIQWRRKKEFPYGWWYGVVGHLESC 326

Query: 155 DENVNHCLCQQS 166
           + N NHC C  S
Sbjct: 327 NNNENHCRCHNS 338


>Medtr3g436860.3 | F-box plant-like protein | HC |
           chr3:12402988-12406347 | 20130731
          Length = 378

 Score =  139 bits (350), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/132 (51%), Positives = 91/132 (68%), Gaps = 8/132 (6%)

Query: 43  MALLVCLESGRFWFPAQVYKR------VPLYCYDAIVSYDSKTDTFRARSPNNGWRMI-E 95
           M   + +E+GRFWFPAQVY R        L CYDA +SYDS+T+TF AR P++G R   E
Sbjct: 207 MNWYLAIETGRFWFPAQVYNRENGHLGFLLSCYDAELSYDSRTNTFLARYPSHGRREARE 266

Query: 96  GNIEWDRLRSSPVENFSRKFYLSD-MNDLKPGDHIEIQKRKRKEYPYDWWFAIVGHLESC 154
             I W+R+R+ PV+      ++S+ +NDL PG+HIEIQ R++KE+PY WW+ +VGHLESC
Sbjct: 267 CGIPWERIRAPPVDISPHDLHISNCLNDLHPGNHIEIQWRRKKEFPYGWWYGVVGHLESC 326

Query: 155 DENVNHCLCQQS 166
           + N NHC C  S
Sbjct: 327 NNNENHCRCHNS 338


>Medtr5g089110.2 | F-box plant-like protein | HC |
           chr5:38730456-38725757 | 20130731
          Length = 347

 Score =  132 bits (333), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/139 (48%), Positives = 90/139 (64%), Gaps = 9/139 (6%)

Query: 41  SKMALLVCLESGRFWFPAQVYKR------VPLYCYDAIVSYDSKTDTFRARSPNNGWRM- 93
           S M   + LE+G F FPAQVY R        L CYDA +SYD +TDTF+AR P +G R  
Sbjct: 203 SFMTWYLALETGNFSFPAQVYNRENGHVGFMLSCYDAELSYDPRTDTFQARYPPHGRRAA 262

Query: 94  -IEGNIEWDRLRSSPVENFSRKFYLSD-MNDLKPGDHIEIQKRKRKEYPYDWWFAIVGHL 151
            +E  I W+RLR+ PV+      ++++ ++DL  GDHIEIQ R+ K++PY WW+ IVGHL
Sbjct: 263 AVEHGIPWERLRAPPVDTPPHDLHITECLHDLHAGDHIEIQWRRNKDFPYGWWYGIVGHL 322

Query: 152 ESCDENVNHCLCQQSDMLV 170
           ESCD N N+C C  S  L+
Sbjct: 323 ESCDGNENYCRCHNSGELM 341


>Medtr1030s0010.1 | F-box plant-like protein | HC |
           scaffold1030:2809-3176 | 20130731
          Length = 122

 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 39/62 (62%)

Query: 1   MLLQNQSKRTCGSFSGVWPSLSLHSYLENFGDLTSLFQKYSKMALLVCLESGRFWFPAQV 60
           +L+        G+ SG  PS  LHSYL+    L  L + +SKMAL + LE+GRFWFPAQV
Sbjct: 61  LLVDQNLSEPFGTISGDSPSQRLHSYLKINRTLIGLIKNHSKMALYIFLETGRFWFPAQV 120

Query: 61  YK 62
           YK
Sbjct: 121 YK 122