Miyakogusa Predicted Gene

Lj1g3v4106890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4106890.1 Non Characterized Hit- tr|I1N8Q3|I1N8Q3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26924
PE,81.71,0,PYR_CT,Pyruvate carboxyltransferase; no
description,Aldolase-type TIM barrel; Aldolase,NULL;
HMGL-li,CUFF.31939.1
         (407 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g089330.1 | hydroxymethylglutaryl-CoA lyase | HC | chr7:34...   633   0.0  
Medtr7g089330.2 | hydroxymethylglutaryl-CoA lyase | HC | chr7:34...   538   e-153
Medtr3g041700.2 | hydroxymethylglutaryl-CoA lyase | HC | chr3:14...   480   e-135
Medtr3g041700.1 | hydroxymethylglutaryl-CoA lyase | HC | chr3:14...   478   e-135
Medtr3g041700.3 | hydroxymethylglutaryl-CoA lyase | HC | chr3:14...   478   e-135
Medtr3g041700.4 | hydroxymethylglutaryl-CoA lyase | HC | chr3:14...   477   e-135

>Medtr7g089330.1 | hydroxymethylglutaryl-CoA lyase | HC |
           chr7:34950520-34944100 | 20130731
          Length = 402

 Score =  633 bits (1632), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/412 (78%), Positives = 346/412 (83%), Gaps = 15/412 (3%)

Query: 1   MQKIVRNRRFLNLPPVLTLPHLSQS---AVDTA-RGVESLDFREIINTSELRSAFDKFNL 56
           MQKI +  RFLN       P+L QS   ++DT  R V+S   REI +T ELR+AFDK+ +
Sbjct: 1   MQKIAQRVRFLN-------PNLLQSQLTSIDTTTRSVQS---REITSTRELRNAFDKYKI 50

Query: 57  KGLSGCLNWTSRRNDKSHAACYVINRHFISDHNDRCAKEFSSKLLKSIPDFVKIVEVGPR 116
             LS  LNWTS  ND  HAA YV+NRHF +D+N  C KEFSSKL K+IPDFVKIVEVG R
Sbjct: 51  NVLSRYLNWTSGANDNHHAASYVVNRHFRADNNGICTKEFSSKLRKNIPDFVKIVEVGAR 110

Query: 117 DGLQNEKVTVPTDVKVELIKLLVSSGLSVVEATSFVSPKWVPQLADAKDVLAGIQNVEGA 176
           DGLQNEK  VPTDVK+ELIKLLVSSGLSVVEATSFVSPKWVPQLADAKDVLA +++VEGA
Sbjct: 111 DGLQNEKAIVPTDVKIELIKLLVSSGLSVVEATSFVSPKWVPQLADAKDVLAAVRDVEGA 170

Query: 177 RFPVLTPNLKGFETAVAAGAKEVAVFPAASESFSKANLNCGIEDNLTRCRDIVLASRSLS 236
            FPVLTPNLKGFE AVAAGAKEVAVFPAASESFSKANLNCGIEDNL RCRDI  ASRSL+
Sbjct: 171 SFPVLTPNLKGFEAAVAAGAKEVAVFPAASESFSKANLNCGIEDNLARCRDIASASRSLT 230

Query: 237 IPVRGYISCVVGCPLEGKIAPTKVAYVAKSLYEMGCSEISLGDTIGVGTPGTVIPMLEAV 296
           IPVRGYISCVVGCPLEG+IAP KVAYVAKSLYEMG SEISLGDTIGVGTPGTVIPMLEAV
Sbjct: 231 IPVRGYISCVVGCPLEGRIAPVKVAYVAKSLYEMGISEISLGDTIGVGTPGTVIPMLEAV 290

Query: 297 LDVVPADKLAVHFHDTYGQALSNTLVSLQMGISTVDSSVSGLGGCPYAKGATGNVATEDV 356
           LDVVP DKLAVHFHDTYGQALSN L+SLQMGISTVDSSVSGLGGCPYAKGATGNVATEDV
Sbjct: 291 LDVVPIDKLAVHFHDTYGQALSNILISLQMGISTVDSSVSGLGGCPYAKGATGNVATEDV 350

Query: 357 VYMLTGLGVKTNVDLGKLMLAGDFICKHLGRXXXXXXXXXXXXVTN-HASKL 407
           VYML GLGVKTNVDLGKLM AGDFICKHLGR            VT  +ASKL
Sbjct: 351 VYMLNGLGVKTNVDLGKLMHAGDFICKHLGRPTGSKAATALNKVTTCNASKL 402


>Medtr7g089330.2 | hydroxymethylglutaryl-CoA lyase | HC |
           chr7:34950524-34944100 | 20130731
          Length = 312

 Score =  538 bits (1385), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 270/310 (87%), Positives = 280/310 (90%), Gaps = 1/310 (0%)

Query: 99  KLLKSIPDFVKIVEVGPRDGLQNEKVTVPTDVKVELIKLLVSSGLSVVEATSFVSPKWVP 158
           +L K+IPDFVKIVEVG RDGLQNEK  VPTDVK+ELIKLLVSSGLSVVEATSFVSPKWVP
Sbjct: 3   QLRKNIPDFVKIVEVGARDGLQNEKAIVPTDVKIELIKLLVSSGLSVVEATSFVSPKWVP 62

Query: 159 QLADAKDVLAGIQNVEGARFPVLTPNLKGFETAVAAGAKEVAVFPAASESFSKANLNCGI 218
           QLADAKDVLA +++VEGA FPVLTPNLKGFE AVAAGAKEVAVFPAASESFSKANLNCGI
Sbjct: 63  QLADAKDVLAAVRDVEGASFPVLTPNLKGFEAAVAAGAKEVAVFPAASESFSKANLNCGI 122

Query: 219 EDNLTRCRDIVLASRSLSIPVRGYISCVVGCPLEGKIAPTKVAYVAKSLYEMGCSEISLG 278
           EDNL RCRDI  ASRSL+IPVRGYISCVVGCPLEG+IAP KVAYVAKSLYEMG SEISLG
Sbjct: 123 EDNLARCRDIASASRSLTIPVRGYISCVVGCPLEGRIAPVKVAYVAKSLYEMGISEISLG 182

Query: 279 DTIGVGTPGTVIPMLEAVLDVVPADKLAVHFHDTYGQALSNTLVSLQMGISTVDSSVSGL 338
           DTIGVGTPGTVIPMLEAVLDVVP DKLAVHFHDTYGQALSN L+SLQMGISTVDSSVSGL
Sbjct: 183 DTIGVGTPGTVIPMLEAVLDVVPIDKLAVHFHDTYGQALSNILISLQMGISTVDSSVSGL 242

Query: 339 GGCPYAKGATGNVATEDVVYMLTGLGVKTNVDLGKLMLAGDFICKHLGRXXXXXXXXXXX 398
           GGCPYAKGATGNVATEDVVYML GLGVKTNVDLGKLM AGDFICKHLGR           
Sbjct: 243 GGCPYAKGATGNVATEDVVYMLNGLGVKTNVDLGKLMHAGDFICKHLGRPTGSKAATALN 302

Query: 399 XVTN-HASKL 407
            VT  +ASKL
Sbjct: 303 KVTTCNASKL 312


>Medtr3g041700.2 | hydroxymethylglutaryl-CoA lyase | HC |
           chr3:14847876-14852490 | 20130731
          Length = 358

 Score =  480 bits (1236), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 228/330 (69%), Positives = 270/330 (81%)

Query: 78  YVINRHFISDHNDRCAKEFSSKLLKSIPDFVKIVEVGPRDGLQNEKVTVPTDVKVELIKL 137
           Y  +  +    N++  ++ + K +K +P+FVKIVEVGPRDGLQNEK  VPTDVK+ELI  
Sbjct: 29  YTSDYQYSQKRNNKDMQDMAYKFMKGMPEFVKIVEVGPRDGLQNEKNIVPTDVKIELIHR 88

Query: 138 LVSSGLSVVEATSFVSPKWVPQLADAKDVLAGIQNVEGARFPVLTPNLKGFETAVAAGAK 197
           L S+GLSV+EATSFVSPKWVPQLADAKDV+  + N+ G R PVLTPNLKGFE AVAAGA+
Sbjct: 89  LASTGLSVIEATSFVSPKWVPQLADAKDVMQAVHNLRGIRLPVLTPNLKGFEAAVAAGAR 148

Query: 198 EVAVFPAASESFSKANLNCGIEDNLTRCRDIVLASRSLSIPVRGYISCVVGCPLEGKIAP 257
           EVAVF +ASESFSK+N+NC IE++L+R R +  A++ LSIPVRGY+SCVVGCP+EG + P
Sbjct: 149 EVAVFASASESFSKSNINCSIEESLSRYRAVTRAAKELSIPVRGYVSCVVGCPVEGPVPP 208

Query: 258 TKVAYVAKSLYEMGCSEISLGDTIGVGTPGTVIPMLEAVLDVVPADKLAVHFHDTYGQAL 317
           +KVAYVAK+LY+MGC EISLGDTIGVGTPGTV+PML AV+ +VP +KLAVHFHDTYGQ+L
Sbjct: 209 SKVAYVAKALYDMGCFEISLGDTIGVGTPGTVVPMLLAVMAIVPTEKLAVHFHDTYGQSL 268

Query: 318 SNTLVSLQMGISTVDSSVSGLGGCPYAKGATGNVATEDVVYMLTGLGVKTNVDLGKLMLA 377
            N LVSLQMGIS VDSSV+GLGGCPYAKGA+GNVATEDVVYML GLG+KTNVD+GKLM A
Sbjct: 269 PNILVSLQMGISAVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGIKTNVDIGKLMSA 328

Query: 378 GDFICKHLGRXXXXXXXXXXXXVTNHASKL 407
           GDFI K LGR            VT  ASK+
Sbjct: 329 GDFIGKQLGRPSGSKTAIALNRVTADASKI 358


>Medtr3g041700.1 | hydroxymethylglutaryl-CoA lyase | HC |
           chr3:14847765-14852904 | 20130731
          Length = 433

 Score =  478 bits (1230), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 228/330 (69%), Positives = 270/330 (81%)

Query: 78  YVINRHFISDHNDRCAKEFSSKLLKSIPDFVKIVEVGPRDGLQNEKVTVPTDVKVELIKL 137
           Y  +  +    N++  ++ + K +K +P+FVKIVEVGPRDGLQNEK  VPTDVK+ELI  
Sbjct: 104 YTSDYQYSQKRNNKDMQDMAYKFMKGMPEFVKIVEVGPRDGLQNEKNIVPTDVKIELIHR 163

Query: 138 LVSSGLSVVEATSFVSPKWVPQLADAKDVLAGIQNVEGARFPVLTPNLKGFETAVAAGAK 197
           L S+GLSV+EATSFVSPKWVPQLADAKDV+  + N+ G R PVLTPNLKGFE AVAAGA+
Sbjct: 164 LASTGLSVIEATSFVSPKWVPQLADAKDVMQAVHNLRGIRLPVLTPNLKGFEAAVAAGAR 223

Query: 198 EVAVFPAASESFSKANLNCGIEDNLTRCRDIVLASRSLSIPVRGYISCVVGCPLEGKIAP 257
           EVAVF +ASESFSK+N+NC IE++L+R R +  A++ LSIPVRGY+SCVVGCP+EG + P
Sbjct: 224 EVAVFASASESFSKSNINCSIEESLSRYRAVTRAAKELSIPVRGYVSCVVGCPVEGPVPP 283

Query: 258 TKVAYVAKSLYEMGCSEISLGDTIGVGTPGTVIPMLEAVLDVVPADKLAVHFHDTYGQAL 317
           +KVAYVAK+LY+MGC EISLGDTIGVGTPGTV+PML AV+ +VP +KLAVHFHDTYGQ+L
Sbjct: 284 SKVAYVAKALYDMGCFEISLGDTIGVGTPGTVVPMLLAVMAIVPTEKLAVHFHDTYGQSL 343

Query: 318 SNTLVSLQMGISTVDSSVSGLGGCPYAKGATGNVATEDVVYMLTGLGVKTNVDLGKLMLA 377
            N LVSLQMGIS VDSSV+GLGGCPYAKGA+GNVATEDVVYML GLG+KTNVD+GKLM A
Sbjct: 344 PNILVSLQMGISAVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGIKTNVDIGKLMSA 403

Query: 378 GDFICKHLGRXXXXXXXXXXXXVTNHASKL 407
           GDFI K LGR            VT  ASK+
Sbjct: 404 GDFIGKQLGRPSGSKTAIALNRVTADASKI 433


>Medtr3g041700.3 | hydroxymethylglutaryl-CoA lyase | HC |
           chr3:14848314-14852904 | 20130731
          Length = 433

 Score =  478 bits (1230), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 228/330 (69%), Positives = 270/330 (81%)

Query: 78  YVINRHFISDHNDRCAKEFSSKLLKSIPDFVKIVEVGPRDGLQNEKVTVPTDVKVELIKL 137
           Y  +  +    N++  ++ + K +K +P+FVKIVEVGPRDGLQNEK  VPTDVK+ELI  
Sbjct: 104 YTSDYQYSQKRNNKDMQDMAYKFMKGMPEFVKIVEVGPRDGLQNEKNIVPTDVKIELIHR 163

Query: 138 LVSSGLSVVEATSFVSPKWVPQLADAKDVLAGIQNVEGARFPVLTPNLKGFETAVAAGAK 197
           L S+GLSV+EATSFVSPKWVPQLADAKDV+  + N+ G R PVLTPNLKGFE AVAAGA+
Sbjct: 164 LASTGLSVIEATSFVSPKWVPQLADAKDVMQAVHNLRGIRLPVLTPNLKGFEAAVAAGAR 223

Query: 198 EVAVFPAASESFSKANLNCGIEDNLTRCRDIVLASRSLSIPVRGYISCVVGCPLEGKIAP 257
           EVAVF +ASESFSK+N+NC IE++L+R R +  A++ LSIPVRGY+SCVVGCP+EG + P
Sbjct: 224 EVAVFASASESFSKSNINCSIEESLSRYRAVTRAAKELSIPVRGYVSCVVGCPVEGPVPP 283

Query: 258 TKVAYVAKSLYEMGCSEISLGDTIGVGTPGTVIPMLEAVLDVVPADKLAVHFHDTYGQAL 317
           +KVAYVAK+LY+MGC EISLGDTIGVGTPGTV+PML AV+ +VP +KLAVHFHDTYGQ+L
Sbjct: 284 SKVAYVAKALYDMGCFEISLGDTIGVGTPGTVVPMLLAVMAIVPTEKLAVHFHDTYGQSL 343

Query: 318 SNTLVSLQMGISTVDSSVSGLGGCPYAKGATGNVATEDVVYMLTGLGVKTNVDLGKLMLA 377
            N LVSLQMGIS VDSSV+GLGGCPYAKGA+GNVATEDVVYML GLG+KTNVD+GKLM A
Sbjct: 344 PNILVSLQMGISAVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGIKTNVDIGKLMSA 403

Query: 378 GDFICKHLGRXXXXXXXXXXXXVTNHASKL 407
           GDFI K LGR            VT  ASK+
Sbjct: 404 GDFIGKQLGRPSGSKTAIALNRVTADASKI 433


>Medtr3g041700.4 | hydroxymethylglutaryl-CoA lyase | HC |
           chr3:14848292-14852904 | 20130731
          Length = 454

 Score =  477 bits (1228), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 228/330 (69%), Positives = 270/330 (81%)

Query: 78  YVINRHFISDHNDRCAKEFSSKLLKSIPDFVKIVEVGPRDGLQNEKVTVPTDVKVELIKL 137
           Y  +  +    N++  ++ + K +K +P+FVKIVEVGPRDGLQNEK  VPTDVK+ELI  
Sbjct: 125 YTSDYQYSQKRNNKDMQDMAYKFMKGMPEFVKIVEVGPRDGLQNEKNIVPTDVKIELIHR 184

Query: 138 LVSSGLSVVEATSFVSPKWVPQLADAKDVLAGIQNVEGARFPVLTPNLKGFETAVAAGAK 197
           L S+GLSV+EATSFVSPKWVPQLADAKDV+  + N+ G R PVLTPNLKGFE AVAAGA+
Sbjct: 185 LASTGLSVIEATSFVSPKWVPQLADAKDVMQAVHNLRGIRLPVLTPNLKGFEAAVAAGAR 244

Query: 198 EVAVFPAASESFSKANLNCGIEDNLTRCRDIVLASRSLSIPVRGYISCVVGCPLEGKIAP 257
           EVAVF +ASESFSK+N+NC IE++L+R R +  A++ LSIPVRGY+SCVVGCP+EG + P
Sbjct: 245 EVAVFASASESFSKSNINCSIEESLSRYRAVTRAAKELSIPVRGYVSCVVGCPVEGPVPP 304

Query: 258 TKVAYVAKSLYEMGCSEISLGDTIGVGTPGTVIPMLEAVLDVVPADKLAVHFHDTYGQAL 317
           +KVAYVAK+LY+MGC EISLGDTIGVGTPGTV+PML AV+ +VP +KLAVHFHDTYGQ+L
Sbjct: 305 SKVAYVAKALYDMGCFEISLGDTIGVGTPGTVVPMLLAVMAIVPTEKLAVHFHDTYGQSL 364

Query: 318 SNTLVSLQMGISTVDSSVSGLGGCPYAKGATGNVATEDVVYMLTGLGVKTNVDLGKLMLA 377
            N LVSLQMGIS VDSSV+GLGGCPYAKGA+GNVATEDVVYML GLG+KTNVD+GKLM A
Sbjct: 365 PNILVSLQMGISAVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGIKTNVDIGKLMSA 424

Query: 378 GDFICKHLGRXXXXXXXXXXXXVTNHASKL 407
           GDFI K LGR            VT  ASK+
Sbjct: 425 GDFIGKQLGRPSGSKTAIALNRVTADASKI 454