Miyakogusa Predicted Gene

Lj1g3v4103630.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4103630.1 tr|E0CRP9|E0CRP9_VITVI Queuine
tRNA-ribosyltransferase OS=Vitis vinifera GN=VIT_18s0001g06460 PE=3
S,90.23,0,tRNA-guanine transglycosylase,Queuine/other
tRNA-ribosyltransferase; Q_tRNA_Tgt,Queuine tRNA-ribosyl,CUFF.31938.1
         (464 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g099370.1 | queuine tRNA-ribosyltransferase | HC | chr5:43...   781   0.0  
Medtr4g031180.1 | queuine tRNA-ribosyltransferase | HC | chr4:10...   119   9e-27

>Medtr5g099370.1 | queuine tRNA-ribosyltransferase | HC |
           chr5:43571527-43578673 | 20130731
          Length = 428

 Score =  781 bits (2017), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/407 (91%), Positives = 390/407 (95%), Gaps = 1/407 (0%)

Query: 58  MALTFEILGKFNRARAARLTLPHFVCQTPLFMPVGTQGTIKGLTNSQLEEIGCQIILGNT 117
           MAL FEILGKF RARA+RLTLPHFVCQTPLFMPVGTQGTIKGLT SQLE+IGCQIILGNT
Sbjct: 1   MALRFEILGKFKRARASRLTLPHFVCQTPLFMPVGTQGTIKGLTTSQLEDIGCQIILGNT 60

Query: 118 YHLELRPTSELLDEVGGLHKFMNWKRALLTDSGGFQMVSLLHLADITEKGVTFQSPVDGK 177
           YHL LRPTSELLD++GGLHKFMNW RA+LTDSGGFQMVSLLHLADITEKGVTFQSPVDGK
Sbjct: 61  YHLALRPTSELLDQLGGLHKFMNWPRAMLTDSGGFQMVSLLHLADITEKGVTFQSPVDGK 120

Query: 178 PMLLTPEESIQIQNRIGADIIMALDDVVKTTITGPRVEEAMYRTLRWIDRCIEAHKRPHD 237
           PMLLTPE+SIQIQNRIGADIIMALDDV+KTT+TGPRVEEAMYRTLRWIDRCI AHKRPHD
Sbjct: 121 PMLLTPEDSIQIQNRIGADIIMALDDVIKTTVTGPRVEEAMYRTLRWIDRCIAAHKRPHD 180

Query: 238 QNLFGIVQGGLDPVLRDICVKGLVERNLPGYAIGGLSGGEDKNSFWRVVAQCTASLPEDK 297
           QNLFGIVQGGLDP+LRD+CVKGLVERNLPGYAIGGLSGGEDKNSFWRVVAQCTA+LPEDK
Sbjct: 181 QNLFGIVQGGLDPMLRDVCVKGLVERNLPGYAIGGLSGGEDKNSFWRVVAQCTAALPEDK 240

Query: 298 PRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALVPEGVLKLKHRAMADDTRPID 357
           PRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALVPEGVLKLK+R MADDTRPID
Sbjct: 241 PRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALVPEGVLKLKNRDMADDTRPID 300

Query: 358 PTCSCMVCKTYTRAYLHCLVTKDAMGSQLVSYHNLYYMMQLSRNLHSSIVEGRFQEFVCE 417
           PTC CMVCK YTRAY+HCLVTKDAMGSQL+SYHNLYYMMQLSRNLHSSIVE RF +FVC+
Sbjct: 301 PTCLCMVCKNYTRAYIHCLVTKDAMGSQLLSYHNLYYMMQLSRNLHSSIVEERFPKFVCD 360

Query: 418 FLQKMFRKGDVPEWVCDAMEVAGIDISSCCATPFSSCQEYDSGKLSE 464
           FL +MF KGDVPEWVC+AMEVAGIDISSCCA P SSCQEYDS  +SE
Sbjct: 361 FLHQMFPKGDVPEWVCNAMEVAGIDISSCCA-PLSSCQEYDSKNVSE 406


>Medtr4g031180.1 | queuine tRNA-ribosyltransferase | HC |
           chr4:10813292-10806220 | 20130731
          Length = 397

 Score =  119 bits (297), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 148/310 (47%), Gaps = 24/310 (7%)

Query: 129 LDEVGGLHKFMNWKRALLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIQ 188
           + ++GG+HK +      +       + SL      ++ G +F++P  G+ +L+ P++ ++
Sbjct: 78  IGKIGGIHKLIGLGDYGVVAVPRDNVHSLPECKGASKLGASFETPC-GR-LLIKPKDYVE 135

Query: 189 IQNRIGADIIMALDDVVKTTITGPRVEEAMYRTLRWIDRCIEAHKRPHDQNLFGIVQGGL 248
           + + +  +I   L D V   +T  R   ++ RTLRW+D C+  +  P   ++FG + GG 
Sbjct: 136 MISCMRPNIWATLADEVPAWVTDKRNRTSVDRTLRWLDDCLALN--PAVGSVFGAIVGGT 193

Query: 249 DPVLRDICVKGLVERNLPGYAIGGLSGGEDKNSFWRVVAQCTASLPEDKPRYVMGVGYPL 308
           +   R  C + + +RN+ GY IGG   GE  +    ++      L ++KPR + G+G P 
Sbjct: 194 NLDERKRCAEEVAKRNVAGYWIGGFGLGEAIDERPALLRAIVDVLQDEKPRMICGLGLPE 253

Query: 309 DIVVCSALGADMYDCVYPTRTARFGTALV-------PEGVLKLKHRAMAD---------- 351
           +I+   A G D++D  Y       G AL         +   KL  R              
Sbjct: 254 EILQGIAAGVDLFDSSYIYTLTLGGFALTFSLDKNGNQDNFKLSQRGSDSTKINLRATEY 313

Query: 352 --DTRPIDPTCSCMVCKTYTRAYLHCLVTKDAMGSQ-LVSYHNLYYMMQLSRNLHSSIVE 408
             D  PI   CSC  C+ YT+AY++ L     M +Q L+  HN ++ ++  R +  +I +
Sbjct: 314 RLDMSPIVDGCSCHTCQNYTKAYINHLYNVHEMLAQTLLEIHNAHHYLRFFRVIREAIQD 373

Query: 409 GRFQEFVCEF 418
           GRF+E+   F
Sbjct: 374 GRFEEYRLTF 383