Miyakogusa Predicted Gene

Lj1g3v4093500.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4093500.2 Non Characterized Hit- tr|A5AUM8|A5AUM8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,33.77,2e-18,seg,NULL; ELONGIN-A-RELATED,NULL; TRANSCRIPTION
ELONGATION FACTOR B POLYPEPTIDE 3,NULL; TFIIS_N,Tran,CUFF.31915.2
         (446 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g089140.9 | transcription elongation factor (TFIIS) family...   546   e-155
Medtr7g089140.1 | transcription elongation factor (TFIIS) family...   546   e-155
Medtr7g089140.4 | transcription elongation factor (TFIIS) family...   546   e-155
Medtr7g089140.3 | transcription elongation factor (TFIIS) family...   546   e-155
Medtr7g089140.2 | transcription elongation factor (TFIIS) family...   546   e-155
Medtr7g089140.7 | transcription elongation factor (TFIIS) family...   329   4e-90
Medtr7g089140.8 | transcription elongation factor (TFIIS) family...   329   4e-90
Medtr7g089140.6 | transcription elongation factor (TFIIS) family...   329   4e-90
Medtr7g089140.5 | transcription elongation factor (TFIIS) family...   329   4e-90
Medtr3g095380.2 | transcription elongation factor (TFIIS) family...    84   3e-16
Medtr3g095380.1 | transcription elongation factor (TFIIS) family...    84   3e-16

>Medtr7g089140.9 | transcription elongation factor (TFIIS) family
           protein | HC | chr7:34862524-34858706 | 20130731
          Length = 447

 Score =  546 bits (1407), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 293/451 (64%), Positives = 330/451 (73%), Gaps = 18/451 (3%)

Query: 1   MKSGSLDQWRSYFRSANSDIFDIIDHAIIVAASDCPKEFRLRRDWIAERLFSCKLTRCLG 60
           MKS SLDQWRSYFRS+NSDIFDIIDHAI+VAASDCPKEF+ RRD IAERLFS  L RC G
Sbjct: 4   MKSESLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKG 63

Query: 61  CDRVELAVAXXXXXXXXXXXXXXCK---IEAGASKESKANDASGDDHGEMNMNPDSIYSF 117
           C++VEL+V               CK   +  GASKESK  D S +++G M+ NP S YSF
Sbjct: 64  CEKVELSVPDDDNGDEL------CKRSSVREGASKESKV-DCSREENGVMDANPISNYSF 116

Query: 118 GXXXXXXXXXXXXSQYLEEVLRIKXXXXXXXXXXDSVIFDSLRRLQLMELTVDRLKATEI 177
           G            SQ + EV RIK          DSV+F+SLRRLQLM+L VD LK+TEI
Sbjct: 117 GEAEALTDELEEQSQLVAEVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTEI 176

Query: 178 GKAVNPLRKHGSQDIRQLARTLIIGWKEMVDEWVNATTTTVIAAS-EGTPDSVNPSVVXX 236
           GKAVN LRKHGS+DIRQLARTLI GWKE+V+ WV ATTTT +AAS EGTPDS NPSVV  
Sbjct: 177 GKAVNHLRKHGSKDIRQLARTLIDGWKELVNAWVKATTTTPVAASEEGTPDSRNPSVVEN 236

Query: 237 XXXX--GLPSPPLDEGAFFVTQAGSMELSQFFDGMDDDGNPRQSGQFNKNRENGRKPAMD 294
                 GLPSPPLDEGAFFV   G++ELSQFFDGMDDDGN R+S  FNKNR+NGRKPA+ 
Sbjct: 237 EEEEEGGLPSPPLDEGAFFVAPTGTIELSQFFDGMDDDGNIRKSAPFNKNRDNGRKPALG 296

Query: 295 NQVVEKRKVQASNETAFTFTAKDTKSQQAKKNEASVRLNKPVTADSGPGRPPKSNMQRKA 354
            Q  +KR   ASNETA   TAKD KSQ  KKNEA+ R NKP+ AD+G  RP  SN+QRKA
Sbjct: 297 TQTKDKRNFPASNETA--VTAKDNKSQHMKKNEAAARPNKPMAADTGRARPLNSNIQRKA 354

Query: 355 SDEPKMAVQQKIENNTITRRPPIVQQNKSKCSDDAAKLEATKRKLQERYQQAENAKRQRT 414
           + EPKM    KIEN+T+ +RP   QQ+KSKCSDD AKLEATKR+LQE YQQAENAKRQRT
Sbjct: 355 NVEPKMP--PKIENSTVPKRPLNAQQDKSKCSDDLAKLEATKRRLQESYQQAENAKRQRT 412

Query: 415 IQVMELNDLPKQVIAHRNPHFKSGNH-RQWG 444
           IQVME+NDLPKQ    RN HFK GNH RQWG
Sbjct: 413 IQVMEINDLPKQGSVQRNTHFKPGNHNRQWG 443


>Medtr7g089140.1 | transcription elongation factor (TFIIS) family
           protein | HC | chr7:34862782-34858668 | 20130731
          Length = 447

 Score =  546 bits (1407), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 293/451 (64%), Positives = 330/451 (73%), Gaps = 18/451 (3%)

Query: 1   MKSGSLDQWRSYFRSANSDIFDIIDHAIIVAASDCPKEFRLRRDWIAERLFSCKLTRCLG 60
           MKS SLDQWRSYFRS+NSDIFDIIDHAI+VAASDCPKEF+ RRD IAERLFS  L RC G
Sbjct: 4   MKSESLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKG 63

Query: 61  CDRVELAVAXXXXXXXXXXXXXXCK---IEAGASKESKANDASGDDHGEMNMNPDSIYSF 117
           C++VEL+V               CK   +  GASKESK  D S +++G M+ NP S YSF
Sbjct: 64  CEKVELSVPDDDNGDEL------CKRSSVREGASKESKV-DCSREENGVMDANPISNYSF 116

Query: 118 GXXXXXXXXXXXXSQYLEEVLRIKXXXXXXXXXXDSVIFDSLRRLQLMELTVDRLKATEI 177
           G            SQ + EV RIK          DSV+F+SLRRLQLM+L VD LK+TEI
Sbjct: 117 GEAEALTDELEEQSQLVAEVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTEI 176

Query: 178 GKAVNPLRKHGSQDIRQLARTLIIGWKEMVDEWVNATTTTVIAAS-EGTPDSVNPSVVXX 236
           GKAVN LRKHGS+DIRQLARTLI GWKE+V+ WV ATTTT +AAS EGTPDS NPSVV  
Sbjct: 177 GKAVNHLRKHGSKDIRQLARTLIDGWKELVNAWVKATTTTPVAASEEGTPDSRNPSVVEN 236

Query: 237 XXXX--GLPSPPLDEGAFFVTQAGSMELSQFFDGMDDDGNPRQSGQFNKNRENGRKPAMD 294
                 GLPSPPLDEGAFFV   G++ELSQFFDGMDDDGN R+S  FNKNR+NGRKPA+ 
Sbjct: 237 EEEEEGGLPSPPLDEGAFFVAPTGTIELSQFFDGMDDDGNIRKSAPFNKNRDNGRKPALG 296

Query: 295 NQVVEKRKVQASNETAFTFTAKDTKSQQAKKNEASVRLNKPVTADSGPGRPPKSNMQRKA 354
            Q  +KR   ASNETA   TAKD KSQ  KKNEA+ R NKP+ AD+G  RP  SN+QRKA
Sbjct: 297 TQTKDKRNFPASNETA--VTAKDNKSQHMKKNEAAARPNKPMAADTGRARPLNSNIQRKA 354

Query: 355 SDEPKMAVQQKIENNTITRRPPIVQQNKSKCSDDAAKLEATKRKLQERYQQAENAKRQRT 414
           + EPKM    KIEN+T+ +RP   QQ+KSKCSDD AKLEATKR+LQE YQQAENAKRQRT
Sbjct: 355 NVEPKMP--PKIENSTVPKRPLNAQQDKSKCSDDLAKLEATKRRLQESYQQAENAKRQRT 412

Query: 415 IQVMELNDLPKQVIAHRNPHFKSGNH-RQWG 444
           IQVME+NDLPKQ    RN HFK GNH RQWG
Sbjct: 413 IQVMEINDLPKQGSVQRNTHFKPGNHNRQWG 443


>Medtr7g089140.4 | transcription elongation factor (TFIIS) family
           protein | HC | chr7:34862782-34858668 | 20130731
          Length = 447

 Score =  546 bits (1407), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 293/451 (64%), Positives = 330/451 (73%), Gaps = 18/451 (3%)

Query: 1   MKSGSLDQWRSYFRSANSDIFDIIDHAIIVAASDCPKEFRLRRDWIAERLFSCKLTRCLG 60
           MKS SLDQWRSYFRS+NSDIFDIIDHAI+VAASDCPKEF+ RRD IAERLFS  L RC G
Sbjct: 4   MKSESLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKG 63

Query: 61  CDRVELAVAXXXXXXXXXXXXXXCK---IEAGASKESKANDASGDDHGEMNMNPDSIYSF 117
           C++VEL+V               CK   +  GASKESK  D S +++G M+ NP S YSF
Sbjct: 64  CEKVELSVPDDDNGDEL------CKRSSVREGASKESKV-DCSREENGVMDANPISNYSF 116

Query: 118 GXXXXXXXXXXXXSQYLEEVLRIKXXXXXXXXXXDSVIFDSLRRLQLMELTVDRLKATEI 177
           G            SQ + EV RIK          DSV+F+SLRRLQLM+L VD LK+TEI
Sbjct: 117 GEAEALTDELEEQSQLVAEVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTEI 176

Query: 178 GKAVNPLRKHGSQDIRQLARTLIIGWKEMVDEWVNATTTTVIAAS-EGTPDSVNPSVVXX 236
           GKAVN LRKHGS+DIRQLARTLI GWKE+V+ WV ATTTT +AAS EGTPDS NPSVV  
Sbjct: 177 GKAVNHLRKHGSKDIRQLARTLIDGWKELVNAWVKATTTTPVAASEEGTPDSRNPSVVEN 236

Query: 237 XXXX--GLPSPPLDEGAFFVTQAGSMELSQFFDGMDDDGNPRQSGQFNKNRENGRKPAMD 294
                 GLPSPPLDEGAFFV   G++ELSQFFDGMDDDGN R+S  FNKNR+NGRKPA+ 
Sbjct: 237 EEEEEGGLPSPPLDEGAFFVAPTGTIELSQFFDGMDDDGNIRKSAPFNKNRDNGRKPALG 296

Query: 295 NQVVEKRKVQASNETAFTFTAKDTKSQQAKKNEASVRLNKPVTADSGPGRPPKSNMQRKA 354
            Q  +KR   ASNETA   TAKD KSQ  KKNEA+ R NKP+ AD+G  RP  SN+QRKA
Sbjct: 297 TQTKDKRNFPASNETA--VTAKDNKSQHMKKNEAAARPNKPMAADTGRARPLNSNIQRKA 354

Query: 355 SDEPKMAVQQKIENNTITRRPPIVQQNKSKCSDDAAKLEATKRKLQERYQQAENAKRQRT 414
           + EPKM    KIEN+T+ +RP   QQ+KSKCSDD AKLEATKR+LQE YQQAENAKRQRT
Sbjct: 355 NVEPKMP--PKIENSTVPKRPLNAQQDKSKCSDDLAKLEATKRRLQESYQQAENAKRQRT 412

Query: 415 IQVMELNDLPKQVIAHRNPHFKSGNH-RQWG 444
           IQVME+NDLPKQ    RN HFK GNH RQWG
Sbjct: 413 IQVMEINDLPKQGSVQRNTHFKPGNHNRQWG 443


>Medtr7g089140.3 | transcription elongation factor (TFIIS) family
           protein | HC | chr7:34862782-34858668 | 20130731
          Length = 444

 Score =  546 bits (1406), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 293/451 (64%), Positives = 330/451 (73%), Gaps = 18/451 (3%)

Query: 1   MKSGSLDQWRSYFRSANSDIFDIIDHAIIVAASDCPKEFRLRRDWIAERLFSCKLTRCLG 60
           MKS SLDQWRSYFRS+NSDIFDIIDHAI+VAASDCPKEF+ RRD IAERLFS  L RC G
Sbjct: 1   MKSESLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKG 60

Query: 61  CDRVELAVAXXXXXXXXXXXXXXCK---IEAGASKESKANDASGDDHGEMNMNPDSIYSF 117
           C++VEL+V               CK   +  GASKESK  D S +++G M+ NP S YSF
Sbjct: 61  CEKVELSVPDDDNGDEL------CKRSSVREGASKESKV-DCSREENGVMDANPISNYSF 113

Query: 118 GXXXXXXXXXXXXSQYLEEVLRIKXXXXXXXXXXDSVIFDSLRRLQLMELTVDRLKATEI 177
           G            SQ + EV RIK          DSV+F+SLRRLQLM+L VD LK+TEI
Sbjct: 114 GEAEALTDELEEQSQLVAEVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTEI 173

Query: 178 GKAVNPLRKHGSQDIRQLARTLIIGWKEMVDEWVNATTTTVIAAS-EGTPDSVNPSVVXX 236
           GKAVN LRKHGS+DIRQLARTLI GWKE+V+ WV ATTTT +AAS EGTPDS NPSVV  
Sbjct: 174 GKAVNHLRKHGSKDIRQLARTLIDGWKELVNAWVKATTTTPVAASEEGTPDSRNPSVVEN 233

Query: 237 XXXX--GLPSPPLDEGAFFVTQAGSMELSQFFDGMDDDGNPRQSGQFNKNRENGRKPAMD 294
                 GLPSPPLDEGAFFV   G++ELSQFFDGMDDDGN R+S  FNKNR+NGRKPA+ 
Sbjct: 234 EEEEEGGLPSPPLDEGAFFVAPTGTIELSQFFDGMDDDGNIRKSAPFNKNRDNGRKPALG 293

Query: 295 NQVVEKRKVQASNETAFTFTAKDTKSQQAKKNEASVRLNKPVTADSGPGRPPKSNMQRKA 354
            Q  +KR   ASNETA   TAKD KSQ  KKNEA+ R NKP+ AD+G  RP  SN+QRKA
Sbjct: 294 TQTKDKRNFPASNETA--VTAKDNKSQHMKKNEAAARPNKPMAADTGRARPLNSNIQRKA 351

Query: 355 SDEPKMAVQQKIENNTITRRPPIVQQNKSKCSDDAAKLEATKRKLQERYQQAENAKRQRT 414
           + EPKM    KIEN+T+ +RP   QQ+KSKCSDD AKLEATKR+LQE YQQAENAKRQRT
Sbjct: 352 NVEPKMP--PKIENSTVPKRPLNAQQDKSKCSDDLAKLEATKRRLQESYQQAENAKRQRT 409

Query: 415 IQVMELNDLPKQVIAHRNPHFKSGNH-RQWG 444
           IQVME+NDLPKQ    RN HFK GNH RQWG
Sbjct: 410 IQVMEINDLPKQGSVQRNTHFKPGNHNRQWG 440


>Medtr7g089140.2 | transcription elongation factor (TFIIS) family
           protein | HC | chr7:34862782-34858668 | 20130731
          Length = 444

 Score =  546 bits (1406), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 293/451 (64%), Positives = 330/451 (73%), Gaps = 18/451 (3%)

Query: 1   MKSGSLDQWRSYFRSANSDIFDIIDHAIIVAASDCPKEFRLRRDWIAERLFSCKLTRCLG 60
           MKS SLDQWRSYFRS+NSDIFDIIDHAI+VAASDCPKEF+ RRD IAERLFS  L RC G
Sbjct: 1   MKSESLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKG 60

Query: 61  CDRVELAVAXXXXXXXXXXXXXXCK---IEAGASKESKANDASGDDHGEMNMNPDSIYSF 117
           C++VEL+V               CK   +  GASKESK  D S +++G M+ NP S YSF
Sbjct: 61  CEKVELSVPDDDNGDEL------CKRSSVREGASKESKV-DCSREENGVMDANPISNYSF 113

Query: 118 GXXXXXXXXXXXXSQYLEEVLRIKXXXXXXXXXXDSVIFDSLRRLQLMELTVDRLKATEI 177
           G            SQ + EV RIK          DSV+F+SLRRLQLM+L VD LK+TEI
Sbjct: 114 GEAEALTDELEEQSQLVAEVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTEI 173

Query: 178 GKAVNPLRKHGSQDIRQLARTLIIGWKEMVDEWVNATTTTVIAAS-EGTPDSVNPSVVXX 236
           GKAVN LRKHGS+DIRQLARTLI GWKE+V+ WV ATTTT +AAS EGTPDS NPSVV  
Sbjct: 174 GKAVNHLRKHGSKDIRQLARTLIDGWKELVNAWVKATTTTPVAASEEGTPDSRNPSVVEN 233

Query: 237 XXXX--GLPSPPLDEGAFFVTQAGSMELSQFFDGMDDDGNPRQSGQFNKNRENGRKPAMD 294
                 GLPSPPLDEGAFFV   G++ELSQFFDGMDDDGN R+S  FNKNR+NGRKPA+ 
Sbjct: 234 EEEEEGGLPSPPLDEGAFFVAPTGTIELSQFFDGMDDDGNIRKSAPFNKNRDNGRKPALG 293

Query: 295 NQVVEKRKVQASNETAFTFTAKDTKSQQAKKNEASVRLNKPVTADSGPGRPPKSNMQRKA 354
            Q  +KR   ASNETA   TAKD KSQ  KKNEA+ R NKP+ AD+G  RP  SN+QRKA
Sbjct: 294 TQTKDKRNFPASNETA--VTAKDNKSQHMKKNEAAARPNKPMAADTGRARPLNSNIQRKA 351

Query: 355 SDEPKMAVQQKIENNTITRRPPIVQQNKSKCSDDAAKLEATKRKLQERYQQAENAKRQRT 414
           + EPKM    KIEN+T+ +RP   QQ+KSKCSDD AKLEATKR+LQE YQQAENAKRQRT
Sbjct: 352 NVEPKMP--PKIENSTVPKRPLNAQQDKSKCSDDLAKLEATKRRLQESYQQAENAKRQRT 409

Query: 415 IQVMELNDLPKQVIAHRNPHFKSGNH-RQWG 444
           IQVME+NDLPKQ    RN HFK GNH RQWG
Sbjct: 410 IQVMEINDLPKQGSVQRNTHFKPGNHNRQWG 440


>Medtr7g089140.7 | transcription elongation factor (TFIIS) family
           protein | HC | chr7:34862782-34858668 | 20130731
          Length = 322

 Score =  329 bits (843), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 177/280 (63%), Positives = 200/280 (71%), Gaps = 13/280 (4%)

Query: 1   MKSGSLDQWRSYFRSANSDIFDIIDHAIIVAASDCPKEFRLRRDWIAERLFSCKLTRCLG 60
           MKS SLDQWRSYFRS+NSDIFDIIDHAI+VAASDCPKEF+ RRD IAERLFS  L RC G
Sbjct: 1   MKSESLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKG 60

Query: 61  CDRVELAVAXXXXXXXXXXXXXXCK---IEAGASKESKANDASGDDHGEMNMNPDSIYSF 117
           C++VEL+V               CK   +  GASKESK  D S +++G M+ NP S YSF
Sbjct: 61  CEKVELSVPDDDNGDEL------CKRSSVREGASKESKV-DCSREENGVMDANPISNYSF 113

Query: 118 GXXXXXXXXXXXXSQYLEEVLRIKXXXXXXXXXXDSVIFDSLRRLQLMELTVDRLKATEI 177
           G            SQ + EV RIK          DSV+F+SLRRLQLM+L VD LK+TEI
Sbjct: 114 GEAEALTDELEEQSQLVAEVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTEI 173

Query: 178 GKAVNPLRKHGSQDIRQLARTLIIGWKEMVDEWVNATTTTVIAAS-EGTPDSVNPSVVXX 236
           GKAVN LRKHGS+DIRQLARTLI GWKE+V+ WV ATTTT +AAS EGTPDS NPSVV  
Sbjct: 174 GKAVNHLRKHGSKDIRQLARTLIDGWKELVNAWVKATTTTPVAASEEGTPDSRNPSVVEN 233

Query: 237 XXXX--GLPSPPLDEGAFFVTQAGSMELSQFFDGMDDDGN 274
                 GLPSPPLDEGAFFV   G++ELSQFFDGMDDDG+
Sbjct: 234 EEEEEGGLPSPPLDEGAFFVAPTGTIELSQFFDGMDDDGS 273


>Medtr7g089140.8 | transcription elongation factor (TFIIS) family
           protein | HC | chr7:34862782-34858668 | 20130731
          Length = 322

 Score =  329 bits (843), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 177/280 (63%), Positives = 200/280 (71%), Gaps = 13/280 (4%)

Query: 1   MKSGSLDQWRSYFRSANSDIFDIIDHAIIVAASDCPKEFRLRRDWIAERLFSCKLTRCLG 60
           MKS SLDQWRSYFRS+NSDIFDIIDHAI+VAASDCPKEF+ RRD IAERLFS  L RC G
Sbjct: 1   MKSESLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKG 60

Query: 61  CDRVELAVAXXXXXXXXXXXXXXCK---IEAGASKESKANDASGDDHGEMNMNPDSIYSF 117
           C++VEL+V               CK   +  GASKESK  D S +++G M+ NP S YSF
Sbjct: 61  CEKVELSVPDDDNGDEL------CKRSSVREGASKESKV-DCSREENGVMDANPISNYSF 113

Query: 118 GXXXXXXXXXXXXSQYLEEVLRIKXXXXXXXXXXDSVIFDSLRRLQLMELTVDRLKATEI 177
           G            SQ + EV RIK          DSV+F+SLRRLQLM+L VD LK+TEI
Sbjct: 114 GEAEALTDELEEQSQLVAEVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTEI 173

Query: 178 GKAVNPLRKHGSQDIRQLARTLIIGWKEMVDEWVNATTTTVIAAS-EGTPDSVNPSVVXX 236
           GKAVN LRKHGS+DIRQLARTLI GWKE+V+ WV ATTTT +AAS EGTPDS NPSVV  
Sbjct: 174 GKAVNHLRKHGSKDIRQLARTLIDGWKELVNAWVKATTTTPVAASEEGTPDSRNPSVVEN 233

Query: 237 XXXX--GLPSPPLDEGAFFVTQAGSMELSQFFDGMDDDGN 274
                 GLPSPPLDEGAFFV   G++ELSQFFDGMDDDG+
Sbjct: 234 EEEEEGGLPSPPLDEGAFFVAPTGTIELSQFFDGMDDDGS 273


>Medtr7g089140.6 | transcription elongation factor (TFIIS) family
           protein | HC | chr7:34862782-34858668 | 20130731
          Length = 325

 Score =  329 bits (843), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 177/280 (63%), Positives = 200/280 (71%), Gaps = 13/280 (4%)

Query: 1   MKSGSLDQWRSYFRSANSDIFDIIDHAIIVAASDCPKEFRLRRDWIAERLFSCKLTRCLG 60
           MKS SLDQWRSYFRS+NSDIFDIIDHAI+VAASDCPKEF+ RRD IAERLFS  L RC G
Sbjct: 4   MKSESLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKG 63

Query: 61  CDRVELAVAXXXXXXXXXXXXXXCK---IEAGASKESKANDASGDDHGEMNMNPDSIYSF 117
           C++VEL+V               CK   +  GASKESK  D S +++G M+ NP S YSF
Sbjct: 64  CEKVELSVPDDDNGDEL------CKRSSVREGASKESKV-DCSREENGVMDANPISNYSF 116

Query: 118 GXXXXXXXXXXXXSQYLEEVLRIKXXXXXXXXXXDSVIFDSLRRLQLMELTVDRLKATEI 177
           G            SQ + EV RIK          DSV+F+SLRRLQLM+L VD LK+TEI
Sbjct: 117 GEAEALTDELEEQSQLVAEVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTEI 176

Query: 178 GKAVNPLRKHGSQDIRQLARTLIIGWKEMVDEWVNATTTTVIAAS-EGTPDSVNPSVVXX 236
           GKAVN LRKHGS+DIRQLARTLI GWKE+V+ WV ATTTT +AAS EGTPDS NPSVV  
Sbjct: 177 GKAVNHLRKHGSKDIRQLARTLIDGWKELVNAWVKATTTTPVAASEEGTPDSRNPSVVEN 236

Query: 237 XXXX--GLPSPPLDEGAFFVTQAGSMELSQFFDGMDDDGN 274
                 GLPSPPLDEGAFFV   G++ELSQFFDGMDDDG+
Sbjct: 237 EEEEEGGLPSPPLDEGAFFVAPTGTIELSQFFDGMDDDGS 276


>Medtr7g089140.5 | transcription elongation factor (TFIIS) family
           protein | HC | chr7:34862782-34858668 | 20130731
          Length = 325

 Score =  329 bits (843), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 177/280 (63%), Positives = 200/280 (71%), Gaps = 13/280 (4%)

Query: 1   MKSGSLDQWRSYFRSANSDIFDIIDHAIIVAASDCPKEFRLRRDWIAERLFSCKLTRCLG 60
           MKS SLDQWRSYFRS+NSDIFDIIDHAI+VAASDCPKEF+ RRD IAERLFS  L RC G
Sbjct: 4   MKSESLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKG 63

Query: 61  CDRVELAVAXXXXXXXXXXXXXXCK---IEAGASKESKANDASGDDHGEMNMNPDSIYSF 117
           C++VEL+V               CK   +  GASKESK  D S +++G M+ NP S YSF
Sbjct: 64  CEKVELSVPDDDNGDEL------CKRSSVREGASKESKV-DCSREENGVMDANPISNYSF 116

Query: 118 GXXXXXXXXXXXXSQYLEEVLRIKXXXXXXXXXXDSVIFDSLRRLQLMELTVDRLKATEI 177
           G            SQ + EV RIK          DSV+F+SLRRLQLM+L VD LK+TEI
Sbjct: 117 GEAEALTDELEEQSQLVAEVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTEI 176

Query: 178 GKAVNPLRKHGSQDIRQLARTLIIGWKEMVDEWVNATTTTVIAAS-EGTPDSVNPSVVXX 236
           GKAVN LRKHGS+DIRQLARTLI GWKE+V+ WV ATTTT +AAS EGTPDS NPSVV  
Sbjct: 177 GKAVNHLRKHGSKDIRQLARTLIDGWKELVNAWVKATTTTPVAASEEGTPDSRNPSVVEN 236

Query: 237 XXXX--GLPSPPLDEGAFFVTQAGSMELSQFFDGMDDDGN 274
                 GLPSPPLDEGAFFV   G++ELSQFFDGMDDDG+
Sbjct: 237 EEEEEGGLPSPPLDEGAFFVAPTGTIELSQFFDGMDDDGS 276


>Medtr3g095380.2 | transcription elongation factor (TFIIS) family
           protein | HC | chr3:43576359-43579439 | 20130731
          Length = 318

 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 21/212 (9%)

Query: 6   LDQWRSYFRSANSDIFDIIDHAIIVAASDCPKEFRLRRDWIAERLFSCK---LTRCLGCD 62
           LD +RS   +A  D++  ID AI VAA D   E + RRD I ERL++     +  C  CD
Sbjct: 3   LDDFRSILHTAGVDVWMFIDTAISVAAQDNAGELKRRRDGIVERLYAASTEGIPMCQNCD 62

Query: 63  RVELAVAXXXXXXXXXXXXXXCKIE---AGASKESKANDASGDDHGEMNMNPDSIYSFGX 119
             +  V                + +    GAS          +D  +  ++P     +G 
Sbjct: 63  GGQRLVTNDNQIKKENSPSLSPERQPRRGGASSPPTPQSEGNEDGEDEEIDP-----YGG 117

Query: 120 XXXXXXXXXXXSQYLEEVLRIKXXXXXXXXXXDSVIFDSLRRLQLMELTVDRLKATEIGK 179
                          +++L IK          D+ + + L+ L  +++T   LK T+IG+
Sbjct: 118 LFDDEQ---------KKILEIKELLEDPHQSEDT-LMELLQNLVDIDITFQELKETDIGR 167

Query: 180 AVNPLRKHGSQDIRQLARTLIIGWKEMVDEWV 211
            VN LRKH S D+R+L + L+  WKE+VD+WV
Sbjct: 168 NVNQLRKHPSSDVRRLVKLLVKKWKEIVDDWV 199


>Medtr3g095380.1 | transcription elongation factor (TFIIS) family
           protein | HC | chr3:43576349-43579439 | 20130731
          Length = 357

 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 21/212 (9%)

Query: 6   LDQWRSYFRSANSDIFDIIDHAIIVAASDCPKEFRLRRDWIAERLFSCK---LTRCLGCD 62
           LD +RS   +A  D++  ID AI VAA D   E + RRD I ERL++     +  C  CD
Sbjct: 3   LDDFRSILHTAGVDVWMFIDTAISVAAQDNAGELKRRRDGIVERLYAASTEGIPMCQNCD 62

Query: 63  RVELAVAXXXXXXXXXXXXXXCKIE---AGASKESKANDASGDDHGEMNMNPDSIYSFGX 119
             +  V                + +    GAS          +D  +  ++P     +G 
Sbjct: 63  GGQRLVTNDNQIKKENSPSLSPERQPRRGGASSPPTPQSEGNEDGEDEEIDP-----YGG 117

Query: 120 XXXXXXXXXXXSQYLEEVLRIKXXXXXXXXXXDSVIFDSLRRLQLMELTVDRLKATEIGK 179
                          +++L IK          D+++ + L+ L  +++T   LK T+IG+
Sbjct: 118 LFDDEQ---------KKILEIKELLEDPHQSEDTLM-ELLQNLVDIDITFQELKETDIGR 167

Query: 180 AVNPLRKHGSQDIRQLARTLIIGWKEMVDEWV 211
            VN LRKH S D+R+L + L+  WKE+VD+WV
Sbjct: 168 NVNQLRKHPSSDVRRLVKLLVKKWKEIVDDWV 199



 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 40/54 (74%)

Query: 372 TRRPPIVQQNKSKCSDDAAKLEATKRKLQERYQQAENAKRQRTIQVMELNDLPK 425
           T  P   Q+ + + + DA +L A +++LQ  Y++A+NAK+QRTIQVM++++LPK
Sbjct: 281 TSAPQNRQREQKESNFDAERLAAARKRLQANYKEADNAKKQRTIQVMDIHELPK 334