Miyakogusa Predicted Gene
- Lj1g3v4093250.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4093250.1 Non Characterized Hit- tr|I3S1U1|I3S1U1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.3,0,Cyclin-like,Cyclin-like; domain present in cyclins, TFIIB
and Retinob,Cyclin-like; seg,NULL; no desc,CUFF.31889.1
(299 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g089080.1 | cyclin | HC | chr7:34806771-34800306 | 20130731 319 2e-87
Medtr5g088980.1 | carboxy-terminal domain cyclin | HC | chr5:386... 202 3e-52
Medtr5g023790.2 | carboxy-terminal domain cyclin | HC | chr5:947... 132 5e-31
Medtr5g023790.1 | carboxy-terminal domain cyclin | HC | chr5:947... 132 5e-31
Medtr8g074000.1 | carboxy-terminal domain cyclin | HC | chr8:312... 131 6e-31
Medtr5g023790.3 | carboxy-terminal domain cyclin | HC | chr5:947... 131 8e-31
Medtr3g088415.3 | carboxy-terminal domain cyclin | HC | chr3:401... 103 3e-22
Medtr3g088415.1 | carboxy-terminal domain cyclin | HC | chr3:401... 103 3e-22
Medtr3g088415.2 | carboxy-terminal domain cyclin | HC | chr3:401... 102 4e-22
Medtr1g018680.1 | carboxy-terminal domain cyclin | HC | chr1:543... 98 8e-21
Medtr2g005960.1 | amine-terminal domain cyclin | LC | chr2:40294... 97 2e-20
Medtr3g107970.1 | carboxy-terminal domain cyclin | HC | chr3:498... 96 4e-20
Medtr1g011470.1 | carboxy-terminal domain cyclin | HC | chr1:203... 96 5e-20
Medtr2g102520.1 | carboxy-terminal domain cyclin | HC | chr2:441... 94 1e-19
Medtr2g102550.1 | carboxy-terminal domain cyclin | HC | chr2:441... 94 1e-19
Medtr3g102510.1 | carboxy-terminal domain cyclin | HC | chr3:472... 94 1e-19
Medtr3g088405.1 | carboxy-terminal domain cyclin | HC | chr3:401... 92 4e-19
Medtr3g102520.1 | carboxy-terminal domain cyclin | HC | chr3:472... 91 1e-18
Medtr3g102530.1 | carboxy-terminal domain cyclin | HC | chr3:472... 91 2e-18
Medtr5g011900.1 | amine-terminal domain cyclin | LC | chr5:35020... 89 4e-18
Medtr5g044040.1 | amine-terminal domain cyclin | LC | chr5:19364... 79 4e-15
Medtr3g060770.1 | carboxy-terminal domain cyclin | LC | chr3:241... 77 2e-14
Medtr3g102560.1 | carboxy-terminal domain cyclin | HC | chr3:472... 75 6e-14
Medtr3g061680.1 | carboxy-terminal domain cyclin | LC | chr3:246... 74 2e-13
Medtr3g060820.1 | carboxy-terminal domain cyclin | LC | chr3:241... 71 1e-12
Medtr3g460990.1 | carboxy-terminal domain cyclin | LC | chr3:240... 68 9e-12
Medtr3g060400.1 | carboxy-terminal domain cyclin | LC | chr3:236... 68 9e-12
Medtr3g102540.1 | carboxy-terminal domain cyclin | LC | chr3:472... 64 2e-10
Medtr3g060410.1 | carboxy-terminal domain cyclin | LC | chr3:236... 61 2e-09
Medtr6g045270.1 | carboxy-terminal domain cyclin | LC | chr6:113... 59 6e-09
>Medtr7g089080.1 | cyclin | HC | chr7:34806771-34800306 | 20130731
Length = 1318
Score = 319 bits (818), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 177/298 (59%), Positives = 198/298 (66%), Gaps = 13/298 (4%)
Query: 1 MASRPVVPQ--QPRGDAVVGGGKQQPKKXXXXXXXXXXXLGDIGNLDPVRGIEVKPNRPI 58
MASRP+V Q QPRGDA +GGGKQQ K L DIGN+ ++G+EVKPNRP+
Sbjct: 1 MASRPIVQQHQQPRGDAALGGGKQQKKNGAAGEGRNRRPLVDIGNVVTLKGVEVKPNRPV 60
Query: 59 TRSFCXXXXXXXXXXXXXXXXXXXXC----PNXXXXXXXXXXXXXXXXKREAPKPVTKRV 114
TRSFC C P APKPV K+V
Sbjct: 61 TRSFCAQLLANAQAAAVAENNKKQACVNVAPGPAPPVVADGVAAVARRVVAAPKPVQKKV 120
Query: 115 TGKPKPVVEVIEISPDEQIXXXXXXXXXXXXXXXX-----TLTSVLTARSKAACGLTNKP 169
T KPKP VEVIE+S +E+ TL+SVLTARSKAACGLTNKP
Sbjct: 121 TAKPKP-VEVIEVSSEEKDNEEKSVHKKKEEVHSKKKPSRTLSSVLTARSKAACGLTNKP 179
Query: 170 KEEIVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPHCYMASQPEINEKMRAILVDWL 229
K EIVDIDA D +NELAAVEY+EDIYKFYK+VENESRPH YM SQPEINE+MR IL+DWL
Sbjct: 180 K-EIVDIDAGDTNNELAAVEYLEDIYKFYKIVENESRPHDYMDSQPEINERMRGILIDWL 238
Query: 230 IDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEVN 287
+DVH+KFELS ETLYLTINIVDRFLAV V RRELQLVGIS+MLMA+KYEEIWPPEVN
Sbjct: 239 VDVHSKFELSPETLYLTINIVDRFLAVNLVSRRELQLVGISAMLMASKYEEIWPPEVN 296
>Medtr5g088980.1 | carboxy-terminal domain cyclin | HC |
chr5:38636983-38633820 | 20130731
Length = 421
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 129/184 (70%), Gaps = 11/184 (5%)
Query: 113 RVTGKPKPV-VEVIEISPDE--------QIXXXXXXXXXXXXXXXXTLTSVLTARSKAAC 163
RV KP EVI IS DE Q T +SVL+ARSKAAC
Sbjct: 81 RVEQAQKPAESEVIVISSDEESEEVKEKQAVRERKIRERSTKKIVKTFSSVLSARSKAAC 140
Query: 164 GLTNKPKEEIVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPHCYMASQPEINEKMRA 223
+ PK+ + +IDASD +NELAA EYI+DIYK+YK+ E++ R H YMASQP+IN KMRA
Sbjct: 141 RVV--PKDFVENIDASDKENELAATEYIDDIYKYYKLSEDDVRVHDYMASQPDINVKMRA 198
Query: 224 ILVDWLIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWP 283
IL+DWLI+VH KFEL ET YLT+NIVDRFL+ K VPR+ELQLVGISSML+A+KYEEIW
Sbjct: 199 ILIDWLIEVHRKFELMPETFYLTLNIVDRFLSTKAVPRKELQLVGISSMLIASKYEEIWA 258
Query: 284 PEVN 287
PEVN
Sbjct: 259 PEVN 262
>Medtr5g023790.2 | carboxy-terminal domain cyclin | HC |
chr5:9472324-9468437 | 20130731
Length = 357
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 91/119 (76%), Gaps = 3/119 (2%)
Query: 170 KEEIVDIDASDVDNELAAVEYIEDIYKFYKMVENES--RPHCYMASQPEINEKMRAILVD 227
+E ++DID D ++ LA EYIED+Y +Y+ VE+ P+ YMA Q +INE+MRAILVD
Sbjct: 152 EEPVMDIDTPDANDPLAVAEYIEDLYSYYRKVESTGCVSPN-YMAQQFDINERMRAILVD 210
Query: 228 WLIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEV 286
WLI+VH KF+L ETL+LT+N++DRFL ++V R++LQLVG+ +ML+A KYEE+ P V
Sbjct: 211 WLIEVHDKFDLMHETLFLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYEEVSVPVV 269
>Medtr5g023790.1 | carboxy-terminal domain cyclin | HC |
chr5:9472333-9468437 | 20130731
Length = 428
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 91/119 (76%), Gaps = 3/119 (2%)
Query: 170 KEEIVDIDASDVDNELAAVEYIEDIYKFYKMVENES--RPHCYMASQPEINEKMRAILVD 227
+E ++DID D ++ LA EYIED+Y +Y+ VE+ P+ YMA Q +INE+MRAILVD
Sbjct: 152 EEPVMDIDTPDANDPLAVAEYIEDLYSYYRKVESTGCVSPN-YMAQQFDINERMRAILVD 210
Query: 228 WLIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEV 286
WLI+VH KF+L ETL+LT+N++DRFL ++V R++LQLVG+ +ML+A KYEE+ P V
Sbjct: 211 WLIEVHDKFDLMHETLFLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYEEVSVPVV 269
>Medtr8g074000.1 | carboxy-terminal domain cyclin | HC |
chr8:31292669-31296642 | 20130731
Length = 434
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 90/119 (75%), Gaps = 3/119 (2%)
Query: 171 EEIVDIDASDVDNELAAVEYIEDIYKFYKMVENES--RPHCYMASQPEINEKMRAILVDW 228
E I+DID+ D +N LA VEYIED++ +Y+ +E P YM Q ++NE+MRAILVDW
Sbjct: 157 EMILDIDSCDANNSLAVVEYIEDLHAYYRKIEYLGCVSP-AYMDEQLDLNERMRAILVDW 215
Query: 229 LIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEVN 287
LI+VH KF+L ETL+LT+N++DRFLA + V R++LQLVG+ +ML+A KYEE+ P V+
Sbjct: 216 LIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKKLQLVGLVAMLLACKYEEVSVPVVS 274
>Medtr5g023790.3 | carboxy-terminal domain cyclin | HC |
chr5:9472324-9468202 | 20130731
Length = 381
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 91/119 (76%), Gaps = 3/119 (2%)
Query: 170 KEEIVDIDASDVDNELAAVEYIEDIYKFYKMVENES--RPHCYMASQPEINEKMRAILVD 227
+E ++DID D ++ LA EYIED+Y +Y+ VE+ P+ YMA Q +INE+MRAILVD
Sbjct: 152 EEPVMDIDTPDANDPLAVAEYIEDLYSYYRKVESTGCVSPN-YMAQQFDINERMRAILVD 210
Query: 228 WLIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEV 286
WLI+VH KF+L ETL+LT+N++DRFL ++V R++LQLVG+ +ML+A KYEE+ P V
Sbjct: 211 WLIEVHDKFDLMHETLFLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYEEVSVPVV 269
>Medtr3g088415.3 | carboxy-terminal domain cyclin | HC |
chr3:40179537-40181795 | 20130731
Length = 397
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 84/122 (68%), Gaps = 4/122 (3%)
Query: 171 EEIVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPHC-YMAS-QPEINEKMRAILVDW 228
E+IV+ID +D +L A + DIYK + E + RP +M Q +IN MRAIL+DW
Sbjct: 222 EKIVNIDNDYMDPQLCAT-FACDIYKHLRASETKKRPSTDFMEKIQKDINPSMRAILIDW 280
Query: 229 LIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEV-N 287
L++V ++ L +TLYLT+N +DR+L+ + R++LQL+G++SM++A+KYEEI P+V
Sbjct: 281 LVEVAEEYRLVPDTLYLTVNYIDRYLSGNPMNRQQLQLLGVASMMIASKYEEICAPQVEE 340
Query: 288 FC 289
FC
Sbjct: 341 FC 342
>Medtr3g088415.1 | carboxy-terminal domain cyclin | HC |
chr3:40179537-40182656 | 20130731
Length = 505
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 84/122 (68%), Gaps = 4/122 (3%)
Query: 171 EEIVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPHC-YMAS-QPEINEKMRAILVDW 228
E+IV+ID +D +L A + DIYK + E + RP +M Q +IN MRAIL+DW
Sbjct: 222 EKIVNIDNDYMDPQLCAT-FACDIYKHLRASETKKRPSTDFMEKIQKDINPSMRAILIDW 280
Query: 229 LIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEV-N 287
L++V ++ L +TLYLT+N +DR+L+ + R++LQL+G++SM++A+KYEEI P+V
Sbjct: 281 LVEVAEEYRLVPDTLYLTVNYIDRYLSGNPMNRQQLQLLGVASMMIASKYEEICAPQVEE 340
Query: 288 FC 289
FC
Sbjct: 341 FC 342
>Medtr3g088415.2 | carboxy-terminal domain cyclin | HC |
chr3:40179537-40182268 | 20130731
Length = 443
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 84/122 (68%), Gaps = 4/122 (3%)
Query: 171 EEIVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPHC-YMAS-QPEINEKMRAILVDW 228
E+IV+ID +D +L A + DIYK + E + RP +M Q +IN MRAIL+DW
Sbjct: 222 EKIVNIDNDYMDPQLCAT-FACDIYKHLRASETKKRPSTDFMEKIQKDINPSMRAILIDW 280
Query: 229 LIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEV-N 287
L++V ++ L +TLYLT+N +DR+L+ + R++LQL+G++SM++A+KYEEI P+V
Sbjct: 281 LVEVAEEYRLVPDTLYLTVNYIDRYLSGNPMNRQQLQLLGVASMMIASKYEEICAPQVEE 340
Query: 288 FC 289
FC
Sbjct: 341 FC 342
>Medtr1g018680.1 | carboxy-terminal domain cyclin | HC |
chr1:5434143-5436837 | 20130731
Length = 363
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 78/105 (74%), Gaps = 5/105 (4%)
Query: 190 YIEDIYKFYKMVENES--RPHC-YMAS-QPEINEKMRAILVDWLIDVHTKFELSLETLYL 245
Y+ DIY + + +E +S RP C Y+ Q ++N MR +LVDWL++V +++L +TLY
Sbjct: 91 YVSDIYDYLRNMEVDSSKRPLCDYIQKVQRDVNASMRGVLVDWLVEVAEEYKLVSDTLYF 150
Query: 246 TINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEV-NFC 289
+++ +DRFL++ + R++LQL+G++SML+A+KYEEI PPEV +FC
Sbjct: 151 SVSYIDRFLSLNDLTRQKLQLLGVASMLVASKYEEIKPPEVEDFC 195
>Medtr2g005960.1 | amine-terminal domain cyclin | LC |
chr2:402942-401842 | 20130731
Length = 234
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 77/132 (58%), Gaps = 15/132 (11%)
Query: 165 LTNKPKEEIVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPH----CYMASQ------ 214
L +PK++ V++ A D N +A EY++ +++ YK+ S PH C A
Sbjct: 97 LLFEPKDQTVNMGADDTINNMAKAEYLDKLHQLYKLTTKRSIPHPDFSCLFAGSLTFEPE 156
Query: 215 -----PEINEKMRAILVDWLIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGI 269
E + + + VDWL+ VH + EL E L+LTINI+DR+L++ ++P+R+L LV I
Sbjct: 157 NHDVDMETEDAINNLNVDWLVKVHYRLELQTEALFLTINIIDRYLSLTSIPKRDLMLVAI 216
Query: 270 SSMLMAAKYEEI 281
SM +A KY+EI
Sbjct: 217 CSMSLADKYKEI 228
>Medtr3g107970.1 | carboxy-terminal domain cyclin | HC |
chr3:49887211-49892757 | 20130731
Length = 478
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 78/120 (65%), Gaps = 4/120 (3%)
Query: 173 IVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPHC-YMAS-QPEINEKMRAILVDWLI 230
VDID +D+++ + Y DIY ++ E E RP YM Q +I+ MR IL+DWL+
Sbjct: 197 FVDIDKKLMDSQIWSA-YAPDIYTKVRVSELEKRPSTNYMEKLQQDISPSMRGILIDWLV 255
Query: 231 DVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEV-NFC 289
+V +++L +TLYLT+N++DRFL+ + + LQL+G++ M +A+KYEE+ P V FC
Sbjct: 256 EVSEEYKLVPDTLYLTVNLIDRFLSTSLIQKHRLQLLGVTCMFIASKYEEMCAPRVEEFC 315
>Medtr1g011470.1 | carboxy-terminal domain cyclin | HC |
chr1:2038488-2033308 | 20130731
Length = 422
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 79/120 (65%), Gaps = 4/120 (3%)
Query: 173 IVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPHC-YMAS-QPEINEKMRAILVDWLI 230
IVDID+ D+ + Y DIY + E E RP YM + Q +I MR ILVDWL+
Sbjct: 145 IVDIDSKLRDSPIWT-SYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLV 203
Query: 231 DVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEV-NFC 289
+V +F+L +TLYL +N++DRFL+ + + +R LQL+GI+ ML+++KYEEI P V +FC
Sbjct: 204 EVADEFKLVPDTLYLAVNLIDRFLSQRLITKRRLQLLGITCMLISSKYEEICAPGVEDFC 263
>Medtr2g102520.1 | carboxy-terminal domain cyclin | HC |
chr2:44171841-44168809 | 20130731
Length = 479
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 77/121 (63%), Gaps = 4/121 (3%)
Query: 172 EIVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPH-CYMAS-QPEINEKMRAILVDWL 229
++ DIDA D +L + Y DIY ++ E RP+ +M + Q +I MRAILVDWL
Sbjct: 198 DVADIDADFEDPQLCS-HYAADIYDHLRVAELSRRPYPNFMETVQQDITPSMRAILVDWL 256
Query: 230 IDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEV-NF 288
++V ++L TLYLT+ ++D FL+ + R LQL+GI+ ML+A+KYEE+ P + +F
Sbjct: 257 VEVSEGYKLQANTLYLTVYLIDWFLSKNCIERERLQLLGITCMLIASKYEEVNAPRIEDF 316
Query: 289 C 289
C
Sbjct: 317 C 317
>Medtr2g102550.1 | carboxy-terminal domain cyclin | HC |
chr2:44178430-44174949 | 20130731
Length = 429
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 85/137 (62%), Gaps = 5/137 (3%)
Query: 157 ARSKAACGLTNKPKE-EIVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPH-CYMAS- 213
A+ + L N PK+ +I +IDA D +L + Y DIY ++ E RPH +M +
Sbjct: 134 AKKDSDSKLLNAPKDPDIPNIDADIEDPQLCSF-YAADIYDNLRVAELSRRPHPNFMETV 192
Query: 214 QPEINEKMRAILVDWLIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSML 273
Q +I MRAIL+DWL++V +F L TLYLT+ ++D FL+ ++ + LQL+GI+ ML
Sbjct: 193 QRDITPGMRAILIDWLVEVSEQFNLQANTLYLTVYLIDWFLSKNSIEIKRLQLLGITCML 252
Query: 274 MAAKYEEIWPPEV-NFC 289
+A+KYEEI + +FC
Sbjct: 253 IASKYEEINANHIEDFC 269
>Medtr3g102510.1 | carboxy-terminal domain cyclin | HC |
chr3:47243553-47241418 | 20130731
Length = 340
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 78/113 (69%), Gaps = 4/113 (3%)
Query: 190 YIEDIYKFYKMVENESRP-HCYMAS-QPEINEKMRAILVDWLIDVHTKFELSLETLYLTI 247
Y+ DI+ + + +E + RP YM + Q I MR LVDWL++V ++ L ETL+L++
Sbjct: 74 YVSDIFDYLQTMEKKRRPMFGYMENVQRGITSNMRGTLVDWLVEVADEYTLLPETLHLSV 133
Query: 248 NIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPE-VNFCNL-DVHYKLD 298
+ +DRFL+ + + R +LQL+G+SSML+A+KYEEI PP+ ++FC + D Y LD
Sbjct: 134 SYIDRFLSNQPIIRSKLQLLGVSSMLIASKYEEITPPKAIDFCQITDNTYDLD 186
>Medtr3g088405.1 | carboxy-terminal domain cyclin | HC |
chr3:40170176-40175369 | 20130731
Length = 510
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 79/121 (65%), Gaps = 4/121 (3%)
Query: 172 EIVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPHC-YMAS-QPEINEKMRAILVDWL 229
E VDID + D + A + +IY+ ++ E RP YM Q +IN MRA+L+DWL
Sbjct: 226 EFVDIDRNTKDPQFCA-SFAHEIYENLRVSEKFKRPSMDYMEKIQKKINASMRAMLIDWL 284
Query: 230 IDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEV-NF 288
++V ++ L +TL+L +N +DR+L+ K + ++LQL+G++ M++AAKYEEI P+V F
Sbjct: 285 VEVADEYRLLPDTLFLAVNYLDRYLSGKAMNTQQLQLLGVTCMMIAAKYEEICAPKVEEF 344
Query: 289 C 289
C
Sbjct: 345 C 345
>Medtr3g102520.1 | carboxy-terminal domain cyclin | HC |
chr3:47250517-47247642 | 20130731
Length = 372
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 83/123 (67%), Gaps = 6/123 (4%)
Query: 182 DNELAAVEYIEDIYKFYKMVENES--RPHC-YMAS-QPEINEKMRAILVDWLIDVHTKFE 237
DN+ Y+ DI + + +E + RP Y+ + Q I+ MR LVDWL++V +++
Sbjct: 83 DNQHIIQPYVSDISDYLRTMEMQKKRRPMVGYLENVQRGISSNMRGTLVDWLVEVADEYK 142
Query: 238 LSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPE-VNFCNL-DVHY 295
L ETL+L+++ +DRFL+++ V R +LQL+G+SSML+A+KYEEI PP+ V+FC + D Y
Sbjct: 143 LLPETLHLSVSYIDRFLSIEPVSRSKLQLLGVSSMLIASKYEEITPPKAVDFCQITDNTY 202
Query: 296 KLD 298
L+
Sbjct: 203 DLE 205
>Medtr3g102530.1 | carboxy-terminal domain cyclin | HC |
chr3:47254814-47252673 | 20130731
Length = 352
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 84/131 (64%), Gaps = 15/131 (11%)
Query: 171 EEIVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPHC-YMAS-QPEINEKMRAILVDW 228
EEI + ASD+ N L +E V+ + RP Y+ Q + MR ILVDW
Sbjct: 78 EEIFESYASDISNYLRTME-----------VQKKRRPMIGYIEKVQRGVTANMRGILVDW 126
Query: 229 LIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPE-VN 287
L++V +++L +TL+L ++ +DRFL+ ++V R +LQL+G+SSML+A+KYEEI PP+ V+
Sbjct: 127 LVEVAEEYKLLPQTLHLAVSYIDRFLSNESVNRSKLQLLGVSSMLIASKYEEISPPKAVD 186
Query: 288 FCNL-DVHYKL 297
FC + D Y+L
Sbjct: 187 FCQITDNTYEL 197
>Medtr5g011900.1 | amine-terminal domain cyclin | LC |
chr5:3502095-3501016 | 20130731
Length = 241
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 167 NKPKEEIVDIDASDVDNE-LAAVEYIEDIYKFYKMVENESRPHCYMASQPEINEKMRAIL 225
NK K+ V+ SDV E L A++YIE++ KFYK E + Y SQ I R L
Sbjct: 47 NKNKKLEVNDVTSDVSKEKLVAMKYIEELNKFYKKDEGSTSTGDYAVSQSNIYISRRPKL 106
Query: 226 VDWLIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPE 285
+D +I +HTK+ +S E+L+L +NIVDRFL ++V +L+LVG+ + L+A KY IW +
Sbjct: 107 LDRVIGIHTKYAISQESLFLAMNIVDRFLVARSVREEKLRLVGMGAWLIAYKYGGIWHLK 166
Query: 286 VN 287
V+
Sbjct: 167 VD 168
>Medtr5g044040.1 | amine-terminal domain cyclin | LC |
chr5:19364442-19364868 | 20130731
Length = 128
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/45 (82%), Positives = 40/45 (88%)
Query: 243 LYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEVN 287
L LTINIVDRFLA+ V RRELQLVGIS+MLM +KYEEIWPPEVN
Sbjct: 7 LCLTINIVDRFLAINLVSRRELQLVGISAMLMTSKYEEIWPPEVN 51
>Medtr3g060770.1 | carboxy-terminal domain cyclin | LC |
chr3:24109546-24108680 | 20130731
Length = 288
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 68/103 (66%), Gaps = 6/103 (5%)
Query: 181 VDNELAAVEYIEDIYKFYKMVENESRPHCYMASQPEINEKMRAILVDWLIDVHTKFELSL 240
+ N+ +Y +D+YKFY + E++ R + + +++ MR I+VDWLI H K +L
Sbjct: 23 ISNKQKFSDYDDDLYKFYHIEESQIRAN---SKGFKVDFLMRKIVVDWLIQTHYKQKLMP 79
Query: 241 ETLYLTINIVDRFLA---VKTVPRRELQLVGISSMLMAAKYEE 280
ETLYL +NI+DRFL+ + +L+L+G+SS+L+A+KYE+
Sbjct: 80 ETLYLCVNILDRFLSKIEFEVTTMDKLKLMGLSSLLLASKYEQ 122
>Medtr3g102560.1 | carboxy-terminal domain cyclin | HC |
chr3:47265371-47267354 | 20130731
Length = 324
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
Query: 191 IEDIYKFYKMVENES--RP-HCYM-ASQPEINEKMRAILVDWLIDVHTKFELSLETLYLT 246
+ Y + + +E E+ RP YM Q +I+ KMR IL+DWL++V +++L +TL+
Sbjct: 65 VSSAYNYLRSIEMETKRRPMKDYMDIVQRDIDPKMRGILIDWLVEVVEEYKLQNDTLHRA 124
Query: 247 INIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEV 286
++ +DRFL+ + R +LQL+G+SSM +A+KYE+I PP V
Sbjct: 125 VSYIDRFLSYYPICRVKLQLLGVSSMYIASKYEDINPPHV 164
>Medtr3g061680.1 | carboxy-terminal domain cyclin | LC |
chr3:24614151-24614996 | 20130731
Length = 281
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 72/120 (60%), Gaps = 10/120 (8%)
Query: 183 NELAAVEYIEDIYKFYKMVENESRPHCYMASQPEINEKMRAILVDWLIDVHTKFELSLET 242
NE +Y +D+YKFY + E++ R + + +++ +MR +VDWLI H + +L ET
Sbjct: 15 NEKKFTDYDDDLYKFYHLEESQIRAN---SKGFKVDFQMRMNVVDWLIQTHYEQKLMPET 71
Query: 243 LYLTINIVDRFLA---VKTVPRRELQLVGISSMLMAAKYEEIWPPEVNFCNLDVHYKLDY 299
LYL +NI+DR L+ + +L+L+G+SS+L+A+KYE+ V DV Y DY
Sbjct: 72 LYLCVNILDRVLSKIKFEVTTMDKLKLIGLSSLLLASKYEQRSAVGV----YDVEYMADY 127
>Medtr3g060820.1 | carboxy-terminal domain cyclin | LC |
chr3:24117223-24116390 | 20130731
Length = 277
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 181 VDNELAAVEYIEDIYKFYKMVENESRPHCYMASQPEINEKMRAILVDWLIDVHTKFELSL 240
+ E +Y +D+YKFY + E++ R + + +++ +MR +VDWLI H + +L
Sbjct: 13 ISKEKKFTDYDDDLYKFYHLEESQIRAN---SKGFKVDFQMRKNVVDWLIQTHYEQKLMP 69
Query: 241 ETLYLTINIVDRFLA-----VKTVPRRELQLVGISSMLMAAKYEEIWPPEVNFCNLDVHY 295
ETLYL +N++DR L+ V TV + L+L+G+SS+L+A+KYE+ V DV Y
Sbjct: 70 ETLYLCVNVLDRVLSKIKFEVTTVDK--LKLIGLSSLLLASKYEQRSVVGV----YDVEY 123
Query: 296 KLDY 299
DY
Sbjct: 124 MADY 127
>Medtr3g460990.1 | carboxy-terminal domain cyclin | LC |
chr3:24061471-24062322 | 20130731
Length = 283
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 67/97 (69%), Gaps = 10/97 (10%)
Query: 189 EYIEDIYKFYKMVENESRPHCYMASQPEINEKMRAILVDWLIDVHTKFELSLETLYLTIN 248
+Y +D+YKFY + E++ + + ++ +++ ++R +VDWLI H + +L ET YL +N
Sbjct: 27 DYDDDLYKFYHLEESQIQGN---SNGFKVDSQIRKNVVDWLIQTHYEQKLMPETFYLCVN 83
Query: 249 IVDRFLA-----VKTVPRRELQLVGISSMLMAAKYEE 280
I+DR L+ VKT+ + L+L+G+SS+L+A+KYE+
Sbjct: 84 ILDRVLSKINFEVKTMEK--LKLIGLSSLLLASKYEQ 118
>Medtr3g060400.1 | carboxy-terminal domain cyclin | LC |
chr3:23689234-23690085 | 20130731
Length = 283
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 67/97 (69%), Gaps = 10/97 (10%)
Query: 189 EYIEDIYKFYKMVENESRPHCYMASQPEINEKMRAILVDWLIDVHTKFELSLETLYLTIN 248
+Y +D+YKFY + E++ + + ++ +++ ++R +VDWLI H + +L ET YL +N
Sbjct: 27 DYDDDLYKFYHLEESQIQGN---SNGFKVDSQIRKNVVDWLIQTHYEQKLMPETFYLCVN 83
Query: 249 IVDRFLA-----VKTVPRRELQLVGISSMLMAAKYEE 280
I+DR L+ VKT+ + L+L+G+SS+L+A+KYE+
Sbjct: 84 ILDRVLSKINFEVKTMEK--LKLIGLSSLLLASKYEQ 118
>Medtr3g102540.1 | carboxy-terminal domain cyclin | LC |
chr3:47258291-47259784 | 20130731
Length = 277
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 51/74 (68%)
Query: 214 QPEINEKMRAILVDWLIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSML 273
Q I ++R LVDWL++V +++L +TL+L ++ +D FL+ + R L+L+G+SS
Sbjct: 37 QRYITPELRGKLVDWLVEVAEEYKLHNDTLHLAVSYIDIFLSSHPIRRINLELLGVSSFY 96
Query: 274 MAAKYEEIWPPEVN 287
+A+KYE+I PP+V
Sbjct: 97 IASKYEDITPPQVQ 110
>Medtr3g060410.1 | carboxy-terminal domain cyclin | LC |
chr3:23691060-23693543 | 20130731
Length = 362
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 57/89 (64%), Gaps = 11/89 (12%)
Query: 216 EINEKMRAILVDWLIDVHTKFELSLETLYLTINIVDRFLA-----VKTVPRRELQLVGIS 270
+++ ++R +VDWLI H + +L ETLYL +NI+DR L+ VKT+ + L+L+G+S
Sbjct: 130 KVDSQLRKNVVDWLIQTHYQQKLMPETLYLCVNILDRVLSKINFEVKTMEK--LKLIGLS 187
Query: 271 SMLMAAKYEEIWPPEVNFCNLDVHYKLDY 299
S+L+A+KYE+ V DV Y DY
Sbjct: 188 SLLLASKYEQRRAVGV----YDVEYLADY 212
>Medtr6g045270.1 | carboxy-terminal domain cyclin | LC |
chr6:11390216-11391181 | 20130731
Length = 321
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 189 EYIEDIYKFYKMVENESRPHCYMASQPEINEKMRAILVDWLIDVHTKFELSLETLYLTIN 248
+Y +D YKF+ + E + + Y IN R +L+D +ID H L+ ETLYL +N
Sbjct: 45 DYEDDFYKFHHLEECQISTNLY---GVRINCDERKLLIDSIIDAHYALNLAPETLYLCVN 101
Query: 249 IVDRFLAVK---TVPRRELQLVGISSMLMAAKYEE 280
I+DRFL+ + P +++ V S+L+A+KYE+
Sbjct: 102 IIDRFLSKLNPPSTPMEKIKFVPHISLLLASKYEQ 136