Miyakogusa Predicted Gene

Lj1g3v4081730.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4081730.1 CUFF.31907.1
         (207 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g088680.1 | nascent proteinassociated complex alpha chain ...   274   5e-74
Medtr3g092970.1 | nascent proteinassociated complex alpha chain ...   196   1e-50
Medtr3g092980.2 | nascent proteinassociated complex alpha chain ...   191   3e-49
Medtr3g092980.1 | nascent proteinassociated complex alpha chain ...   190   7e-49
Medtr3g093750.1 | hypothetical protein | HC | chr3:42832436-4283...    97   8e-21
Medtr1g006975.1 | disease resistance protein (CC-NBS-LRR class) ...    76   2e-14
Medtr3g093720.1 | UBA/TS-N domain protein | HC | chr3:42818981-4...    61   7e-10

>Medtr7g088680.1 | nascent proteinassociated complex alpha chain |
           HC | chr7:34572677-34570419 | 20130731
          Length = 203

 Score =  274 bits (700), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 149/209 (71%), Positives = 156/209 (74%), Gaps = 8/209 (3%)

Query: 1   MTAQSQEELLAAHLEQQKIHXXX--XXXXXXXXXXXXXXXXXXXXXNIEGQEGDASGRSK 58
           MTAQ+QEELLAAHLEQQKIH                          N EG EGDASGRSK
Sbjct: 1   MTAQTQEELLAAHLEQQKIHHDEPVVEDDDDEDDEDDEDDDDEDDDNAEGFEGDASGRSK 60

Query: 59  QTRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNIVFVISKPDVFKSPTSDTYIIFGEAKI 118
           QTRSEKKSRKAMLKLGMK VTGVSRVT+KKSKNI+FVISKPDVFKSPTSDTYIIFGEAKI
Sbjct: 61  QTRSEKKSRKAMLKLGMKAVTGVSRVTIKKSKNILFVISKPDVFKSPTSDTYIIFGEAKI 120

Query: 119 EDLSSQLQTQAAEQFKAPNLGNVGLKPESSGVAQXXXXXXXXXXXXXXXXXPKDVELVMT 178
           EDLSSQLQTQAAEQFKAPNL N G KPESSG+A                  PKD+ELV+T
Sbjct: 121 EDLSSQLQTQAAEQFKAPNLTNAGAKPESSGIA------PEDEDVDETGVDPKDIELVVT 174

Query: 179 QATVSRPKAVKALKAANGDIVAAIMELTN 207
           QA V R +AVKALKAANGDIVAAIMELTN
Sbjct: 175 QAGVPRSRAVKALKAANGDIVAAIMELTN 203


>Medtr3g092970.1 | nascent proteinassociated complex alpha chain |
           HC | chr3:42497928-42500253 | 20130731
          Length = 227

 Score =  196 bits (498), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 100/151 (66%), Positives = 116/151 (76%)

Query: 57  SKQTRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNIVFVISKPDVFKSPTSDTYIIFGEA 116
           SKQ+RSEKKSRKAMLKLG+KPVTGVSRVT+K++KNI+F ISKPDVFKSP S+TYIIFGEA
Sbjct: 77  SKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYIIFGEA 136

Query: 117 KIEDLSSQLQTQAAEQFKAPNLGNVGLKPESSGVAQXXXXXXXXXXXXXXXXXPKDVELV 176
           KIEDLSSQLQTQAA+QF+ P++G+V  K +    A                  P D++LV
Sbjct: 137 KIEDLSSQLQTQAAQQFRMPDMGSVMAKQDQGASASGAIPEEEEEEIDETGVEPHDIDLV 196

Query: 177 MTQATVSRPKAVKALKAANGDIVAAIMELTN 207
           MTQA VS+ KAVKALK  NGDIV AIMELT 
Sbjct: 197 MTQAGVSKSKAVKALKTHNGDIVGAIMELTT 227


>Medtr3g092980.2 | nascent proteinassociated complex alpha chain |
           HC | chr3:42501153-42503353 | 20130731
          Length = 220

 Score =  191 bits (486), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 100/163 (61%), Positives = 121/163 (74%), Gaps = 6/163 (3%)

Query: 45  NIEGQEGDASGRSKQTRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNIVFVISKPDVFKS 104
           ++ G EG     SKQ+RSEKKSRKAMLKLG+KP+ GV+RVT+K++KN++F ISKPDVFKS
Sbjct: 64  DVGGTEG-----SKQSRSEKKSRKAMLKLGLKPIDGVTRVTIKRTKNVMFFISKPDVFKS 118

Query: 105 PTSDTYIIFGEAKIEDLSSQLQTQAAEQFKAPNLGNVGLKPESSGVAQXXXXXXXXXXXX 164
           P S+TY+IFGEAKIEDLSSQLQTQAA+QF+ P++G++  K E  G A             
Sbjct: 119 PNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSIMAKQE-QGAAADGAQPEEEEEVD 177

Query: 165 XXXXXPKDVELVMTQATVSRPKAVKALKAANGDIVAAIMELTN 207
                  D+ELVMTQA VS+ KAVKALK  NGDIV AIMELTN
Sbjct: 178 ETGVEAHDIELVMTQAGVSKAKAVKALKTHNGDIVGAIMELTN 220


>Medtr3g092980.1 | nascent proteinassociated complex alpha chain |
           HC | chr3:42500811-42503374 | 20130731
          Length = 218

 Score =  190 bits (483), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 100/160 (62%), Positives = 119/160 (74%), Gaps = 6/160 (3%)

Query: 48  GQEGDASGRSKQTRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNIVFVISKPDVFKSPTS 107
           G EG     SKQ+RSEKKSRKAMLKLG+KP+ GV+RVT+K++KN++F ISKPDVFKSP S
Sbjct: 65  GTEG-----SKQSRSEKKSRKAMLKLGLKPIDGVTRVTIKRTKNVMFFISKPDVFKSPNS 119

Query: 108 DTYIIFGEAKIEDLSSQLQTQAAEQFKAPNLGNVGLKPESSGVAQXXXXXXXXXXXXXXX 167
           +TY+IFGEAKIEDLSSQLQTQAA+QF+ P++G++  K E  G A                
Sbjct: 120 ETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSIMAKQE-QGAAADGAQPEEEEEVDETG 178

Query: 168 XXPKDVELVMTQATVSRPKAVKALKAANGDIVAAIMELTN 207
               D+ELVMTQA VS+ KAVKALK  NGDIV AIMELTN
Sbjct: 179 VEAHDIELVMTQAGVSKAKAVKALKTHNGDIVGAIMELTN 218


>Medtr3g093750.1 | hypothetical protein | HC |
           chr3:42832436-42836000 | 20130731
          Length = 530

 Score = 97.4 bits (241), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 61/124 (49%), Positives = 75/124 (60%), Gaps = 17/124 (13%)

Query: 86  VKKSKNIVFVISKPDVFKSPTSDTYIIFGEAKIEDL--SSQLQTQAAEQFKAPNLGNVGL 143
           +K++KNI+F ISK DV KS  SDTYI+F EAK EDL  S QLQTQAA++  A   G  G 
Sbjct: 419 IKRTKNIMFFISKLDVIKSSNSDTYIMFEEAKKEDLMNSHQLQTQAAQEQGA---GADGA 475

Query: 144 KPESSGVAQXXXXXXXXXXXXXXXXXPKDVELVMTQATVSRPKAVKALKAANGDIVAAIM 203
           +PE                        +++E+VM QA VSR KAVKALK  NGDIV A++
Sbjct: 476 QPEEEEEVD------------ETGMQAQNIEMVMIQAGVSRSKAVKALKTYNGDIVDAML 523

Query: 204 ELTN 207
           EL N
Sbjct: 524 ELIN 527


>Medtr1g006975.1 | disease resistance protein (CC-NBS-LRR class)
            family protein | LC | chr1:129008-136403 | 20130731
          Length = 1943

 Score = 76.3 bits (186), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/48 (79%), Positives = 42/48 (87%)

Query: 45   NIEGQEGDASGRSKQTRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNI 92
            +I   EGDASGRSKQTRSEKKS KAMLKLGMK VTGVS VT+KK+KN+
Sbjct: 1894 SIASLEGDASGRSKQTRSEKKSHKAMLKLGMKAVTGVSCVTIKKNKNV 1941


>Medtr3g093720.1 | UBA/TS-N domain protein | HC |
           chr3:42818981-42820040 | 20130731
          Length = 295

 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/36 (80%), Positives = 31/36 (86%)

Query: 172 DVELVMTQATVSRPKAVKALKAANGDIVAAIMELTN 207
           D+ELVMTQA VSR KAVKALK  NGDIV AIMELT+
Sbjct: 222 DIELVMTQAGVSRSKAVKALKTHNGDIVGAIMELTD 257