Miyakogusa Predicted Gene

Lj1g3v4058530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4058530.1 Non Characterized Hit- tr|A5BCY2|A5BCY2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,49.31,2e-17,seg,NULL,CUFF.31808.1
         (174 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g010510.2 | plant/T16L1-180 protein, putative | HC | chr2:...   142   1e-34
Medtr2g010510.1 | plant/T16L1-180 protein, putative | HC | chr2:...   142   1e-34

>Medtr2g010510.2 | plant/T16L1-180 protein, putative | HC |
           chr2:2415661-2420889 | 20130731
          Length = 320

 Score =  142 bits (359), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 78/118 (66%), Positives = 91/118 (77%), Gaps = 1/118 (0%)

Query: 1   MDKQVNDTSKDKNNGDRSHKDGKSLRRTGRHAVVDRCTSVSASCLSKREYDHTPEGLKDE 60
           +DK+V  +SKDK + D+ H D  + R   RHA  DR TS SASC +K EY HT EGLKDE
Sbjct: 76  LDKRVTGSSKDKRSDDKRHMDHNTSRSAERHAGDDRSTSASASCSTKNEYGHTQEGLKDE 135

Query: 61  ELEKFLHSRTKRGRGAVGPRMDETGPFLPPHADVEPSTTSPDVREHRVVYGPERPSSL 118
           ELE+FLHSR KRGRGA+GPRMDETGP+LPP+ D EPS TSPD REHR +YGP+RP SL
Sbjct: 136 ELEEFLHSRKKRGRGAIGPRMDETGPYLPPNPDEEPS-TSPDFREHRAIYGPKRPPSL 192


>Medtr2g010510.1 | plant/T16L1-180 protein, putative | HC |
           chr2:2415819-2420924 | 20130731
          Length = 320

 Score =  142 bits (359), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 78/118 (66%), Positives = 91/118 (77%), Gaps = 1/118 (0%)

Query: 1   MDKQVNDTSKDKNNGDRSHKDGKSLRRTGRHAVVDRCTSVSASCLSKREYDHTPEGLKDE 60
           +DK+V  +SKDK + D+ H D  + R   RHA  DR TS SASC +K EY HT EGLKDE
Sbjct: 76  LDKRVTGSSKDKRSDDKRHMDHNTSRSAERHAGDDRSTSASASCSTKNEYGHTQEGLKDE 135

Query: 61  ELEKFLHSRTKRGRGAVGPRMDETGPFLPPHADVEPSTTSPDVREHRVVYGPERPSSL 118
           ELE+FLHSR KRGRGA+GPRMDETGP+LPP+ D EPS TSPD REHR +YGP+RP SL
Sbjct: 136 ELEEFLHSRKKRGRGAIGPRMDETGPYLPPNPDEEPS-TSPDFREHRAIYGPKRPPSL 192