Miyakogusa Predicted Gene

Lj1g3v4058490.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4058490.1 Non Characterized Hit- tr|I3T4V1|I3T4V1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.62,0,HIT-like,HIT-like domain; HIT_2,Histidine triad (HIT)
protein; no description,HIT-like domain; HIT_1,CUFF.31810.1
         (145 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g026810.1 | scavenger mRNA decapping enzyme carboxy-term-b...   242   9e-65
Medtr4g084190.1 | scavenger mRNA decapping enzyme carboxy-term-b...   191   2e-49
Medtr4g084190.2 | scavenger mRNA decapping enzyme carboxy-term-b...   184   3e-47
Medtr7g088160.2 | scavenger mRNA decapping enzyme carboxy-term-b...    99   1e-21
Medtr7g088160.1 | scavenger mRNA decapping enzyme carboxy-term-b...    99   1e-21
Medtr4g084190.3 | scavenger mRNA decapping enzyme carboxy-term-b...    95   2e-20

>Medtr6g026810.1 | scavenger mRNA decapping enzyme
           carboxy-term-binding protein | HC | chr6:9052613-9055956
           | 20130731
          Length = 153

 Score =  242 bits (617), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 113/133 (84%), Positives = 128/133 (96%), Gaps = 1/133 (0%)

Query: 13  AMASEKDAALAATPPSSEYTPTIFDRIINKEIPSTVVYEDDKVLAFRDIAPQAPVHILII 72
           +MASEK+AALAATPP ++ +PTIFD+IINKEIPSTVVYEDDKVLAFRDI PQ PVHIL+I
Sbjct: 22  SMASEKEAALAATPPDAD-SPTIFDKIINKEIPSTVVYEDDKVLAFRDIQPQGPVHILLI 80

Query: 73  PKVRDGLTGLSKAEERHFEILGRLLHTAKLVAKQEGLDDGFRIVINDGPKGCQSVYHIHV 132
           PKVRDGLTG+SKAEERH +ILGRLL+TAKLVAKQEGLDDG+R+VINDGPKGCQSVYHIHV
Sbjct: 81  PKVRDGLTGISKAEERHIDILGRLLYTAKLVAKQEGLDDGYRVVINDGPKGCQSVYHIHV 140

Query: 133 HLLGGRQMDWPPG 145
           H++GGRQM+WPPG
Sbjct: 141 HVIGGRQMNWPPG 153


>Medtr4g084190.1 | scavenger mRNA decapping enzyme
           carboxy-term-binding protein | HC |
           chr4:32811793-32814077 | 20130731
          Length = 182

 Score =  191 bits (486), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 83/114 (72%), Positives = 102/114 (89%)

Query: 32  TPTIFDRIINKEIPSTVVYEDDKVLAFRDIAPQAPVHILIIPKVRDGLTGLSKAEERHFE 91
            PTIFD+IINKEIPS++VYED+KVLAFRDI+PQAPVH+L+IPK RDGLT L KA+ RH E
Sbjct: 69  APTIFDKIINKEIPSSIVYEDEKVLAFRDISPQAPVHVLVIPKFRDGLTELGKADARHGE 128

Query: 92  ILGRLLHTAKLVAKQEGLDDGFRIVINDGPKGCQSVYHIHVHLLGGRQMDWPPG 145
           ILG+LL+ AK+VA++EG+ DGFR+VIN G   CQSVYH+H+H+LGGRQM+WPPG
Sbjct: 129 ILGQLLYAAKIVAEKEGIADGFRVVINSGASACQSVYHLHLHVLGGRQMNWPPG 182


>Medtr4g084190.2 | scavenger mRNA decapping enzyme
           carboxy-term-binding protein | HC |
           chr4:32811793-32814077 | 20130731
          Length = 190

 Score =  184 bits (467), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 83/122 (68%), Positives = 102/122 (83%), Gaps = 8/122 (6%)

Query: 32  TPTIFDRIINKEIPSTVVYEDDKVLAFRDIAPQAPVHILIIPKVRDGLTGLSK------- 84
            PTIFD+IINKEIPS++VYED+KVLAFRDI+PQAPVH+L+IPK RDGLT L K       
Sbjct: 69  APTIFDKIINKEIPSSIVYEDEKVLAFRDISPQAPVHVLVIPKFRDGLTELGKVANHLVL 128

Query: 85  -AEERHFEILGRLLHTAKLVAKQEGLDDGFRIVINDGPKGCQSVYHIHVHLLGGRQMDWP 143
            A+ RH EILG+LL+ AK+VA++EG+ DGFR+VIN G   CQSVYH+H+H+LGGRQM+WP
Sbjct: 129 YADARHGEILGQLLYAAKIVAEKEGIADGFRVVINSGASACQSVYHLHLHVLGGRQMNWP 188

Query: 144 PG 145
           PG
Sbjct: 189 PG 190


>Medtr7g088160.2 | scavenger mRNA decapping enzyme
          carboxy-term-binding protein | HC |
          chr7:34308144-34313976 | 20130731
          Length = 389

 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 2/79 (2%)

Query: 14 MASEKDAALAATPPSSEYTP-TIFDR-IINKEIPSTVVYEDDKVLAFRDIAPQAPVHILI 71
          MA EK+A LA T  +SE  P T+FDR II +E PSTV YEDD+VLAFRDIAP+AP HI+I
Sbjct: 1  MAPEKEAVLATTLSASESDPPTMFDRSIIKRENPSTVFYEDDEVLAFRDIAPEAPPHIII 60

Query: 72 IPKVRDGLTGLSKAEERHF 90
          IPK R+GLTGLSKA+   F
Sbjct: 61 IPKSRNGLTGLSKAQVPQF 79


>Medtr7g088160.1 | scavenger mRNA decapping enzyme
          carboxy-term-binding protein | HC |
          chr7:34308144-34313891 | 20130731
          Length = 389

 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 2/79 (2%)

Query: 14 MASEKDAALAATPPSSEYTP-TIFDR-IINKEIPSTVVYEDDKVLAFRDIAPQAPVHILI 71
          MA EK+A LA T  +SE  P T+FDR II +E PSTV YEDD+VLAFRDIAP+AP HI+I
Sbjct: 1  MAPEKEAVLATTLSASESDPPTMFDRSIIKRENPSTVFYEDDEVLAFRDIAPEAPPHIII 60

Query: 72 IPKVRDGLTGLSKAEERHF 90
          IPK R+GLTGLSKA+   F
Sbjct: 61 IPKSRNGLTGLSKAQVPQF 79


>Medtr4g084190.3 | scavenger mRNA decapping enzyme
           carboxy-term-binding protein | HC |
           chr4:32811793-32813601 | 20130731
          Length = 131

 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 42/52 (80%), Positives = 49/52 (94%)

Query: 33  PTIFDRIINKEIPSTVVYEDDKVLAFRDIAPQAPVHILIIPKVRDGLTGLSK 84
           PTIFD+IINKEIPS++VYED+KVLAFRDI+PQAPVH+L+IPK RDGLT L K
Sbjct: 70  PTIFDKIINKEIPSSIVYEDEKVLAFRDISPQAPVHVLVIPKFRDGLTELGK 121