Miyakogusa Predicted Gene

Lj1g3v4027090.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4027090.2 Non Characterized Hit- tr|A9P0B1|A9P0B1_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,60.24,6e-19,seg,NULL,CUFF.31781.2
         (225 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g087480.1 | hypothetical protein | HC | chr7:34052848-3405...   263   7e-71
Medtr3g089170.2 | HCaRG protein | HC | chr3:33883138-33885395 | ...    58   8e-09
Medtr3g089170.1 | HCaRG protein | HC | chr3:33881665-33885393 | ...    58   8e-09

>Medtr7g087480.1 | hypothetical protein | HC |
           chr7:34052848-34055798 | 20130731
          Length = 283

 Score =  263 bits (673), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 135/221 (61%), Positives = 157/221 (71%), Gaps = 3/221 (1%)

Query: 8   VLVCLRWLIRKFVYQNLTGDELVKLFPPDLPLHLQTILLLCFQKNGQCWRDDVSAQQDLL 67
           +L  LRWLIR FV +NLT D+L+K FPP LPL LQTILLL FQ N  CW  D S QQDLL
Sbjct: 63  LLASLRWLIRIFVSRNLTHDQLLKFFPPHLPLQLQTILLLSFQNNRDCWNHDFSQQQDLL 122

Query: 68  PATGVSSEVRTDIAXXXXXXXXXXXXXXXWPRQDPDSLAQMNQSDFGISTPLVADCNVSG 127
             T  S +VRT++                WPRQD DSLA++N  D G+ T  VA+ NVSG
Sbjct: 123 QWTDASCQVRTNVHPSFSSEPSSSMSTSLWPRQDSDSLARLNCGDLGVPTSPVAEVNVSG 182

Query: 128 LPACFQCDVAPFEN---SENLPFLKSMTWTMENRGSSPADRVAIITLKLHDRSKSSLGEK 184
           LP CFQCD+   EN    E+LP LKSMTWTME+RGSSPA+RVAII+LKLHD SKS+ GE 
Sbjct: 183 LPTCFQCDITSSENLVLEESLPHLKSMTWTMESRGSSPAERVAIISLKLHDYSKSTAGET 242

Query: 185 EVKFQITRDTLEAMLTSMTYISEQLSAVGTSSGPANKKQKQ 225
           +VKFQ+TRDTLE ML SMT++ E+L AV TSS  ANKKQKQ
Sbjct: 243 DVKFQLTRDTLETMLKSMTFVGERLRAVETSSRLANKKQKQ 283


>Medtr3g089170.2 | HCaRG protein | HC | chr3:33883138-33885395 |
           20130731
          Length = 193

 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 46/76 (60%)

Query: 145 LPFLKSMTWTMENRGSSPADRVAIITLKLHDRSKSSLGEKEVKFQITRDTLEAMLTSMTY 204
           +P LK+MTW M ++ +  +D  A+I LKL + ++   GE ++KFQ+  D++E ML  M  
Sbjct: 118 VPRLKAMTWNMADQDTELSDPTAVINLKLQNDARFHSGELDLKFQLATDSVEMMLKEMHN 177

Query: 205 ISEQLSAVGTSSGPAN 220
           + +Q SA+   +   N
Sbjct: 178 MRDQFSAMEDEAPKGN 193


>Medtr3g089170.1 | HCaRG protein | HC | chr3:33881665-33885393 |
           20130731
          Length = 193

 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 46/76 (60%)

Query: 145 LPFLKSMTWTMENRGSSPADRVAIITLKLHDRSKSSLGEKEVKFQITRDTLEAMLTSMTY 204
           +P LK+MTW M ++ +  +D  A+I LKL + ++   GE ++KFQ+  D++E ML  M  
Sbjct: 118 VPRLKAMTWNMADQDTELSDPTAVINLKLQNDARFHSGELDLKFQLATDSVEMMLKEMHN 177

Query: 205 ISEQLSAVGTSSGPAN 220
           + +Q SA+   +   N
Sbjct: 178 MRDQFSAMEDEAPKGN 193