Miyakogusa Predicted Gene

Lj1g3v4027090.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4027090.1 Non Characterized Hit- tr|C6T9G2|C6T9G2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23267
PE,38.76,0.000000000002,seg,NULL,CUFF.31781.1
         (194 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g087480.1 | hypothetical protein | HC | chr7:34052848-3405...   150   5e-37

>Medtr7g087480.1 | hypothetical protein | HC |
           chr7:34052848-34055798 | 20130731
          Length = 283

 Score =  150 bits (380), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 77/139 (55%), Positives = 89/139 (64%)

Query: 8   VLVCLRWLIRKFVYQNLTGDELVKLFPPDLPLHLQTILLLCFQKNGQCWRDDVSAQQDLL 67
           +L  LRWLIR FV +NLT D+L+K FPP LPL LQTILLL FQ N  CW  D S QQDLL
Sbjct: 63  LLASLRWLIRIFVSRNLTHDQLLKFFPPHLPLQLQTILLLSFQNNRDCWNHDFSQQQDLL 122

Query: 68  PATGVSSEVRTDIAXXXXXXXXXXXXXXXWPRQDPDSLAQMNQSDFGISTPLVADCNVSG 127
             T  S +VRT++                WPRQD DSLA++N  D G+ T  VA+ NVSG
Sbjct: 123 QWTDASCQVRTNVHPSFSSEPSSSMSTSLWPRQDSDSLARLNCGDLGVPTSPVAEVNVSG 182

Query: 128 LPACFQCDVAPFENSVLEE 146
           LP CFQCD+   EN VLEE
Sbjct: 183 LPTCFQCDITSSENLVLEE 201