Miyakogusa Predicted Gene

Lj1g3v3979290.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3979290.1 Non Characterized Hit- tr|B9IBL1|B9IBL1_POPTR
Putative uncharacterized protein OS=Populus
trichocarp,32.14,2e-16,DUF2215,Transmembrane protein 194; seg,NULL;
FAMILY NOT NAMED,NULL,CUFF.31727.1
         (511 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g086460.1 | transmembrane protein, putative | HC | chr7:33...   629   e-180
Medtr5g015280.1 | transmembrane protein, putative | HC | chr5:52...   155   8e-38

>Medtr7g086460.1 | transmembrane protein, putative | HC |
           chr7:33562182-33566981 | 20130731
          Length = 518

 Score =  629 bits (1621), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 313/481 (65%), Positives = 348/481 (72%), Gaps = 4/481 (0%)

Query: 34  TLKDVNIERPVLDVSPSPLSGYPAAQGVKNILKCERVQVSGISRLKLGSYANSFHITLAP 93
           TLK V+IERP LDVSPS L G    QG KNI++CERVQVSGISRLKLGSYANS H+TLAP
Sbjct: 38  TLKGVDIERPTLDVSPSLLLGQSNTQGAKNIMRCERVQVSGISRLKLGSYANSLHVTLAP 97

Query: 94  SVTIPERLHNKIQVCFHRNNTLGWCQCEKDEWKSVQKGIWDVVMSPYETRYVDVRIDGDI 153
           SV IPERLHNKI+VCFHRNNTLGWCQCEKDEW+ VQKGIW  VMSPYETRYVDV+ID +I
Sbjct: 98  SVAIPERLHNKIKVCFHRNNTLGWCQCEKDEWRGVQKGIWSAVMSPYETRYVDVKIDCEI 157

Query: 154 SGPVTVALEEDSQQWRLVCXXXXXXXXXXXXXXSNWVPFYYSSSMAXXXXXXXXXXXXQG 213
              VTVAL+ED QQWRL+               S+WVPFYYSSSMA            QG
Sbjct: 158 LRSVTVALKEDFQQWRLISLVVGLILLLLAPIVSSWVPFYYSSSMAIGIFLVVIIILFQG 217

Query: 214 MKLLPTGRKNILYFTIYGPVLWVGKYLLHQFSMIANSILQSFGMNEEMHNXXXXXXXXXX 273
           MKLLPTGRKN LY TIYG VL  G  LLHQFSMI NSILQ+ GM+EEMHN          
Sbjct: 218 MKLLPTGRKNFLYITIYGSVLGAGSILLHQFSMIVNSILQTLGMSEEMHNPVALSVLLGI 277

Query: 274 XXXXXXXXYWIVRRFVISKEDGSVDAGVAEFVKWAMRIFGYTFIWQSTLDLTXXXXXXXX 333
                   YWIVR+FVISKEDGSVDAGVA+FVKWAMR+ G TF+ QSTLD T        
Sbjct: 278 ILAGAALGYWIVRKFVISKEDGSVDAGVAQFVKWAMRVIGTTFVLQSTLDNTLAVGALVF 337

Query: 334 XXXXCELVYSIQWLHEWYETSGNDDYSLEWMKGTRGRAEFLGKSTPKRKMSRSP----QG 389
               C+L+ SIQ LHEWYETS NDDYSLEW++GTRGRAEFL KS PK KM  SP    + 
Sbjct: 338 CGAVCKLISSIQLLHEWYETSENDDYSLEWVRGTRGRAEFLSKSPPKGKMWNSPKSGSKA 397

Query: 390 KLWNSPKRSSWXXXXXXXXXXXXXXXXXXXCVAQVEPDYYSTFHKTRNRKKFTKNEWDEF 449
           K+WN+PKR+SW                      Q   +YYSTFHKT NRKKFTK EWD+F
Sbjct: 398 KMWNNPKRTSWSDSPVRGVVSPSSGFSPQTSGTQSGENYYSTFHKTGNRKKFTKEEWDDF 457

Query: 450 TRESTKQALAEWAASPEFTEWVIEHADRIKLVPSENSDEAIGSESDSTEVGSGNGFRLFN 509
           TR+STKQALAEWAASPEFT+W+++HADRIKL+PSE+SDE + SESDSTE GSGNGF LFN
Sbjct: 458 TRDSTKQALAEWAASPEFTDWIVDHADRIKLLPSESSDETMESESDSTEAGSGNGFWLFN 517

Query: 510 W 510
           W
Sbjct: 518 W 518


>Medtr5g015280.1 | transmembrane protein, putative | HC |
           chr5:5273365-5279899 | 20130731
          Length = 485

 Score =  155 bits (392), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 141/278 (50%), Gaps = 13/278 (4%)

Query: 51  PLSGYPAAQ-GVKNILKCERVQVSGISRLK-LGSYANSFHITLAPS---VTIPERLHNKI 105
           P+   P ++ GV  I+  ERV + G+SR + L  +A+S  + + P+   V +P      I
Sbjct: 48  PVRNSPGSKPGVTLIV--ERVHIHGLSRFRNLVKFAHSVKVKVFPANSNVRVP-----NI 100

Query: 106 QVCFHRNNTLGWCQCEKDEWKSVQKGIWDVVMSPYETRYVDVRIDGDISGPVTVALEEDS 165
           +VCFHRN +L    C + +W+   KG W   MSP++ + +D+R  G       V+ EE+ 
Sbjct: 101 EVCFHRNASLATGMCPQGQWEKAVKGSWVRTMSPFDHKLLDIRTAGSTLENFEVSAEEEF 160

Query: 166 QQWRLVCXXXXXXXXXXXXXXSNWVPFYYSSSMAXXXXXXXXXXXXQGMKLLPTGRKNIL 225
             +R+V               S  + FYYSS+MA            QGMKLLPTGRK+ L
Sbjct: 161 FAYRIVLLILGITLMSSAAFLSQSLTFYYSSAMAIGIILVILIILYQGMKLLPTGRKSSL 220

Query: 226 YFTIYGPVLWVGKYLLHQFSMIANSILQSFGMNEEMHNXXXXXXXXXXXXXXXXXXYWIV 285
              +Y   + +G +LL     +  SIL   G++E+M+N                  +W+V
Sbjct: 221 AIFLYSSAIGLGTFLLRYIPGLVRSILTELGIDEDMYNPLAIFLLTFVAIAGAWLGFWVV 280

Query: 286 RRFVISKEDGSVDAGVAEFVKWAMRIFGYTFIWQSTLD 323
           ++ V++ E+GSVD   A+FV WA+RI     I QS++D
Sbjct: 281 KKLVLT-EEGSVDMSTAQFVAWAIRILAAIMILQSSMD 317



 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 41/62 (66%)

Query: 428 YYSTFHKTRNRKKFTKNEWDEFTRESTKQALAEWAASPEFTEWVIEHADRIKLVPSENSD 487
           Y S  H T  R+K++  EWD FT+EST++AL E   SP+F +W+  +ADRI + P+  ++
Sbjct: 418 YPSIIHTTPERRKYSPAEWDAFTKESTEKALEELVQSPDFGKWLSTNADRISVTPNSETN 477

Query: 488 EA 489
            A
Sbjct: 478 RA 479