Miyakogusa Predicted Gene

Lj1g3v3975950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3975950.1 tr|B9I622|B9I622_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_806969 PE=4
SV=1,50,0.0000000000003,DUF639,Protein of unknown function DUF639;
FAMILY NOT NAMED,NULL; seg,NULL,CUFF.31697.1
         (93 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g086350.1 | DUF639 family protein | HC | chr7:33505298-335...    77   3e-15

>Medtr7g086350.1 | DUF639 family protein | HC |
           chr7:33505298-33500091 | 20130731
          Length = 674

 Score = 77.0 bits (188), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/58 (62%), Positives = 39/58 (67%)

Query: 18  QHANIXXXXXXXXXXXXXXXPFKIFIMGLIVQSFTMSLKMGKSSGPGNRRLKEWWDSI 75
           +HAN                PFK F+MGLIVQSFTM+LK GKSSG GNRRLKEWWDSI
Sbjct: 599 KHANAVMVAMGGLAFLLAVIPFKFFLMGLIVQSFTMTLKTGKSSGTGNRRLKEWWDSI 656