Miyakogusa Predicted Gene

Lj1g3v3975270.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3975270.2 Non Characterized Hit- tr|J3LTX5|J3LTX5_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G4,47.52,3e-18,seg,NULL,CUFF.31663.2
         (264 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g085790.1 | transmembrane protein, putative | HC | chr7:33...   206   1e-53
Medtr7g085790.2 | transmembrane protein, putative | HC | chr7:33...   165   5e-41
Medtr6g029250.1 | transmembrane protein, putative | HC | chr6:10...   160   2e-39

>Medtr7g085790.1 | transmembrane protein, putative | HC |
           chr7:33263998-33261569 | 20130731
          Length = 252

 Score =  206 bits (525), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/256 (53%), Positives = 157/256 (61%), Gaps = 34/256 (13%)

Query: 21  ENQIFLGKSNPESKSDFDMNYFYCTSPKSRD-------SSTTQLLHDDPIQFVENTEDDH 73
           E QIFL K N      FD +YF CTSPKS             Q+ H  PIQF    +   
Sbjct: 19  EKQIFLDKRNSLV---FDKDYF-CTSPKSTKIIDIEPLKVPKQVFHV-PIQFEPIIDKVP 73

Query: 74  VGDNSDTTSEKIKAVVVEADEQETLSVSQFFLQL-ENKFADMKMDSPKSSP-RVLFPPPL 131
                   +EKIK   +E  +QE  SVSQ F  + ENKF DMK++SPKSS  R LF P L
Sbjct: 74  NEGLVKENTEKIKVPQIEEADQE--SVSQVFFHIKENKFVDMKLESPKSSSGRGLFSP-L 130

Query: 132 DAGALKFEDKGEAMEVMVSPRRK-VENEMATMDCD-REEVDPTDGFNFWKWSLTGVGAIC 189
           DA           ME+M SPR K +ENE   M  D +E  D   GFN WKWSLTGVGAIC
Sbjct: 131 DAD----------MEMMTSPRMKNMENEKVDMYYDEKEGEDMNGGFNLWKWSLTGVGAIC 180

Query: 190 SFGVAAATICVLVFGSQQK-NKFHQNHKIQFQIYTDDKRIKQVVQQATKLNEAIAATRGI 248
           SFGVAAATICVL FGSQQ+ NK  Q+  I+F+IYTDDK    VVQ  TKLNEA AA RG+
Sbjct: 181 SFGVAAATICVLFFGSQQRNNKLQQDQSIRFKIYTDDK----VVQHTTKLNEAFAAVRGV 236

Query: 249 PLSRAHITYGGYYEAL 264
           PLSRAHITYGGYY+++
Sbjct: 237 PLSRAHITYGGYYDSV 252


>Medtr7g085790.2 | transmembrane protein, putative | HC |
           chr7:33263947-33261680 | 20130731
          Length = 213

 Score =  165 bits (417), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 115/253 (45%), Positives = 131/253 (51%), Gaps = 67/253 (26%)

Query: 21  ENQIFLGKSNPESKSDFDMNYFYCTSPKSRD-------SSTTQLLHDDPIQFVENTEDDH 73
           E QIFL K N      FD +YF CTSPKS             Q+ H  PIQF    +   
Sbjct: 19  EKQIFLDKRNSLV---FDKDYF-CTSPKSTKIIDIEPLKVPKQVFHV-PIQFEPIIDKVP 73

Query: 74  VGDNSDTTSEKIKAVVVEADEQETLSVSQFFLQL-ENKFADMKMDSPKSSPRVLFPPPLD 132
                   +EKIK   +E  +QE  SVSQ F  + ENKF DM  D               
Sbjct: 74  NEGLVKENTEKIKVPQIEEADQE--SVSQVFFHIKENKFVDMYYD--------------- 116

Query: 133 AGALKFEDKGEAMEVMVSPRRKVENEMATMDCDREEVDPTDGFNFWKWSLTGVGAICSFG 192
                 E +GE M                            GFN WKWSLTGVGAICSFG
Sbjct: 117 ------EKEGEDM--------------------------NGGFNLWKWSLTGVGAICSFG 144

Query: 193 VAAATICVLVFGSQQK-NKFHQNHKIQFQIYTDDKRIKQVVQQATKLNEAIAATRGIPLS 251
           VAAATICVL FGSQQ+ NK  Q+  I+F+IYTDDK    VVQ  TKLNEA AA RG+PLS
Sbjct: 145 VAAATICVLFFGSQQRNNKLQQDQSIRFKIYTDDK----VVQHTTKLNEAFAAVRGVPLS 200

Query: 252 RAHITYGGYYEAL 264
           RAHITYGGYY+++
Sbjct: 201 RAHITYGGYYDSV 213


>Medtr6g029250.1 | transmembrane protein, putative | HC |
           chr6:10061688-10064217 | 20130731
          Length = 228

 Score =  160 bits (404), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/236 (44%), Positives = 140/236 (59%), Gaps = 37/236 (15%)

Query: 32  ESKSDFDMNYFYCTSPKSRDSSTTQLLHDDPIQFVENTEDDHVGDNSDTTSEK--IKAVV 89
           E KS  DM Y Y + P+ ++    QL+   P+Q      D  +G+ S+    K   K   
Sbjct: 22  EKKSALDMEYLYPSPPRKQN----QLV---PLQI---PLDLKIGNTSNDVLLKDITKNQS 71

Query: 90  VEADEQETLSVSQFFLQL-ENKFADMKMDSPKSSPRVLFPPPLDAGALKFEDKGEAMEVM 148
           +E D++E  +VSQ F ++ EN+  DMK++SPKSS    F                    +
Sbjct: 72  LEDDQEE--NVSQVFFKIKENEIGDMKIESPKSSSSKEF--------------------I 109

Query: 149 VSPRRKVE-NEMATMDCDRE-EVDPTDGFNFWKWSLTGVGAICSFGVAAATICVLVFGSQ 206
            SPR  +E ++    + D   E +   GFN WKWSL+GVGAIC+FGV AA+ICVL FGSQ
Sbjct: 110 TSPRMIIEKDDFGDKEEDSSWEEENNSGFNLWKWSLSGVGAICTFGVVAASICVLFFGSQ 169

Query: 207 QKNKFHQNHKIQFQIYTDDKRIKQVVQQATKLNEAIAATRGIPLSRAHITYGGYYE 262
           Q+ K  ++ K +FQIY DDKRIKQVVQ ATKLNEAI+  RG+P++RAHIT GG Y+
Sbjct: 170 QRKKLQKDQKNRFQIYADDKRIKQVVQHATKLNEAISVVRGVPITRAHITVGGNYD 225