Miyakogusa Predicted Gene

Lj1g3v3975270.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3975270.1 Non Characterized Hit- tr|J3LTX5|J3LTX5_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G4,44.55,7e-18,seg,NULL,CUFF.31663.1
         (280 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g085790.1 | transmembrane protein, putative | HC | chr7:33...   205   4e-53
Medtr7g085790.2 | transmembrane protein, putative | HC | chr7:33...   162   3e-40
Medtr6g029250.1 | transmembrane protein, putative | HC | chr6:10...   159   3e-39

>Medtr7g085790.1 | transmembrane protein, putative | HC |
           chr7:33263998-33261569 | 20130731
          Length = 252

 Score =  205 bits (521), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 140/293 (47%), Positives = 165/293 (56%), Gaps = 54/293 (18%)

Query: 1   MDSNDWVXXXXXXXXXXXXENQIFLGKSNLESKSDFDMNYFYCTSPKSR-----DSSTTT 55
           MD N+WV            E QIFL K N      FD +YF CTSPKS      +     
Sbjct: 1   MDINEWVILSDDGFFDGD-EKQIFLDKRN---SLVFDKDYF-CTSPKSTKIIDIEPLKVP 55

Query: 56  TQLLHD----DPILLFVPHIGNKVENTEDDDHVGDNSADTTSEKIKGAVVVEADQQETVD 111
            Q+ H     +PI+  VP+ G   ENTE               KIK   + EADQ+    
Sbjct: 56  KQVFHVPIQFEPIIDKVPNEGLVKENTE---------------KIKVPQIEEADQE---- 96

Query: 112 TVSVSQFLLQL-ENNFADMKMDSPKSSPTVLFPPPLDDAGAMKSEDKGEAMEVMVSPRMK 170
             SVSQ    + EN F DMK++SPKSS       PLD             ME+M SPRMK
Sbjct: 97  --SVSQVFFHIKENKFVDMKLESPKSSSGRGLFSPLD-----------ADMEMMTSPRMK 143

Query: 171 -VENEMTTMDCVREEG-DHTDGFNFWKWSLTGVGAICSFGVAAATICVLVFGSKQR-NKF 227
            +ENE   M    +EG D   GFN WKWSLTGVGAICSFGVAAATICVL FGS+QR NK 
Sbjct: 144 NMENEKVDMYYDEKEGEDMNGGFNLWKWSLTGVGAICSFGVAAATICVLFFGSQQRNNKL 203

Query: 228 HQNHKIQFQIYTDDKRIKQVVQQATKLNKAIAATRGIPLSRAHITYGGFYEAL 280
            Q+  I+F+IYTDDK    VVQ  TKLN+A AA RG+PLSRAHITYGG+Y+++
Sbjct: 204 QQDQSIRFKIYTDDK----VVQHTTKLNEAFAAVRGVPLSRAHITYGGYYDSV 252


>Medtr7g085790.2 | transmembrane protein, putative | HC |
           chr7:33263947-33261680 | 20130731
          Length = 213

 Score =  162 bits (411), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/291 (41%), Positives = 142/291 (48%), Gaps = 89/291 (30%)

Query: 1   MDSNDWVXXXXXXXXXXXXENQIFLGKSNLESKSDFDMNYFYCTSPKSR-----DSSTTT 55
           MD N+WV            E QIFL K N      FD +YF CTSPKS      +     
Sbjct: 1   MDINEWVILSDDGFFDGD-EKQIFLDKRN---SLVFDKDYF-CTSPKSTKIIDIEPLKVP 55

Query: 56  TQLLHD----DPILLFVPHIGNKVENTEDDDHVGDNSADTTSEKIKGAVVVEADQQETVD 111
            Q+ H     +PI+  VP+ G   ENTE               KIK   + EADQ+    
Sbjct: 56  KQVFHVPIQFEPIIDKVPNEGLVKENTE---------------KIKVPQIEEADQE---- 96

Query: 112 TVSVSQFLLQL-ENNFADMKMDSPKSSPTVLFPPPLDDAGAMKSEDKGEAMEVMVSPRMK 170
             SVSQ    + EN F DM  D                      E +GE           
Sbjct: 97  --SVSQVFFHIKENKFVDMYYD----------------------EKEGE----------- 121

Query: 171 VENEMTTMDCVREEGDHTDGFNFWKWSLTGVGAICSFGVAAATICVLVFGSKQR-NKFHQ 229
                          D   GFN WKWSLTGVGAICSFGVAAATICVL FGS+QR NK  Q
Sbjct: 122 ---------------DMNGGFNLWKWSLTGVGAICSFGVAAATICVLFFGSQQRNNKLQQ 166

Query: 230 NHKIQFQIYTDDKRIKQVVQQATKLNKAIAATRGIPLSRAHITYGGFYEAL 280
           +  I+F+IYTDDK    VVQ  TKLN+A AA RG+PLSRAHITYGG+Y+++
Sbjct: 167 DQSIRFKIYTDDK----VVQHTTKLNEAFAAVRGVPLSRAHITYGGYYDSV 213


>Medtr6g029250.1 | transmembrane protein, putative | HC |
           chr6:10061688-10064217 | 20130731
          Length = 228

 Score =  159 bits (402), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/251 (41%), Positives = 138/251 (54%), Gaps = 50/251 (19%)

Query: 31  ESKSDFDMNYFYCTSPKSRDSSTTTTQLLHDDPILLFVPHIGNKVENTEDDDHVGDNSAD 90
           E KS  DM Y Y + P+ ++      QL     + L +P           D  +G+ S D
Sbjct: 22  EKKSALDMEYLYPSPPRKQN------QL-----VPLQIPL----------DLKIGNTSND 60

Query: 91  TTSEKIKGAVVVEADQQETVDTVSVSQFLLQLENNFADMKMDSPKSSPTVLFPPPLDDAG 150
              + I     +E DQ+E V  V    F    EN   DMK++SPKSS +  F        
Sbjct: 61  VLLKDITKNQSLEDDQEENVSQV----FFKIKENEIGDMKIESPKSSSSKEF-------- 108

Query: 151 AMKSEDKGEAMEVMVSPRMKVENEM---TTMDCVREEGDHTDGFNFWKWSLTGVGAICSF 207
                        + SPRM +E +       D   EE +++ GFN WKWSL+GVGAIC+F
Sbjct: 109 -------------ITSPRMIIEKDDFGDKEEDSSWEEENNS-GFNLWKWSLSGVGAICTF 154

Query: 208 GVAAATICVLVFGSKQRNKFHQNHKIQFQIYTDDKRIKQVVQQATKLNKAIAATRGIPLS 267
           GV AA+ICVL FGS+QR K  ++ K +FQIY DDKRIKQVVQ ATKLN+AI+  RG+P++
Sbjct: 155 GVVAASICVLFFGSQQRKKLQKDQKNRFQIYADDKRIKQVVQHATKLNEAISVVRGVPIT 214

Query: 268 RAHITYGGFYE 278
           RAHIT GG Y+
Sbjct: 215 RAHITVGGNYD 225