Miyakogusa Predicted Gene

Lj1g3v3975170.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3975170.1 tr|B0UFE3|B0UFE3_METS4 Pyridoxamine 5'-phosphate
oxidase-related FMN-binding OS=Methylobacterium
sp.,32.22,9e-19,SUBFAMILY NOT NAMED,NULL; CREG1 PROTEIN,NULL; no
description,FMN-binding split barrel; Pyrid_oxidase,CUFF.31645.1
         (317 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g085670.1 | root border cell-specific protein, putative | ...   510   e-145
Medtr7g085670.2 | root border cell-specific protein, putative | ...   311   5e-85
Medtr4g007990.1 | pyridoxamine 5'-phosphate oxidase family prote...    88   1e-17

>Medtr7g085670.1 | root border cell-specific protein, putative | HC
           | chr7:33212985-33217524 | 20130731
          Length = 328

 Score =  510 bits (1314), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 264/328 (80%), Positives = 284/328 (86%), Gaps = 15/328 (4%)

Query: 1   MKTMVTPLMRISPSFRQNAHKALPFSPT-RHSSSPNSFTFISAIPTLSISMAASSQSTAP 59
           MKTMVTPL R+S  FR   + ALPFSP  R S  PNSFTF S  P+LS  MA+SSQSTA 
Sbjct: 1   MKTMVTPLTRVSTFFRPIPYNALPFSPKPRFSFLPNSFTFTSLTPSLS--MASSSQSTAQ 58

Query: 60  AVPSGDVGMKKDEVFQLIQA------------QVRTVLDHSLRGVLSTFSKKYEGYPSGS 107
            V SGDV  KKD+VFQLIQA            ++RTVLD SLRG LSTFSKKY+GYPSGS
Sbjct: 59  VVSSGDVNNKKDDVFQLIQAHQEKAARLPPVEEIRTVLDRSLRGTLSTFSKKYDGYPSGS 118

Query: 108 MVDFACDANGCPILAVSDLAVHTKDLTANPKCSLLVARDPEDRTDLVITLHGDAVSVPEK 167
           MVDFACDANGCPILAVSDLAVH+KDL ANPKCS+L+ARDPEDRTDLVITLHGDA+ VPEK
Sbjct: 119 MVDFACDANGCPILAVSDLAVHSKDLAANPKCSVLLARDPEDRTDLVITLHGDAIFVPEK 178

Query: 168 DKEAVRAAYLARHPNAFWVDFGDFQFVRIKPKTVRFVSGVATALLGSGEFDGDEYKSAKV 227
           DKEA+RAAYLARHPNAFWVDFGDF+FVRI+PK VRFVSGVATALLGSGEF GDEYKSAKV
Sbjct: 179 DKEAIRAAYLARHPNAFWVDFGDFRFVRIEPKVVRFVSGVATALLGSGEFTGDEYKSAKV 238

Query: 228 DPVAQFSKPVASHMNKDHGEDTKVIVQHWTSVPVDFADILDLDCLGFNVKAGYQGDTFKL 287
           DP+AQFSKPVASHMNKDHGEDTK IVQHWTSVPVDFADI+DLD LGFN+KAGY+GD FKL
Sbjct: 239 DPIAQFSKPVASHMNKDHGEDTKAIVQHWTSVPVDFADIIDLDRLGFNIKAGYKGDKFKL 298

Query: 288 RVPFPRRAEDRKDVKTLIVEMLQAARPQ 315
           RVPFPR AEDRKDVKTLIVEMLQAA+PQ
Sbjct: 299 RVPFPRPAEDRKDVKTLIVEMLQAAKPQ 326


>Medtr7g085670.2 | root border cell-specific protein, putative | HC
           | chr7:33213022-33215504 | 20130731
          Length = 236

 Score =  311 bits (797), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 169/223 (75%), Positives = 184/223 (82%), Gaps = 15/223 (6%)

Query: 1   MKTMVTPLMRISPSFRQNAHKALPFSPT-RHSSSPNSFTFISAIPTLSISMAASSQSTAP 59
           MKTMVTPL R+S  FR   + ALPFSP  R S  PNSFTF S  P  S+SMA+SSQSTA 
Sbjct: 1   MKTMVTPLTRVSTFFRPIPYNALPFSPKPRFSFLPNSFTFTSLTP--SLSMASSSQSTAQ 58

Query: 60  AVPSGDVGMKKDEVFQLIQA------------QVRTVLDHSLRGVLSTFSKKYEGYPSGS 107
            V SGDV  KKD+VFQLIQA            ++RTVLD SLRG LSTFSKKY+GYPSGS
Sbjct: 59  VVSSGDVNNKKDDVFQLIQAHQEKAARLPPVEEIRTVLDRSLRGTLSTFSKKYDGYPSGS 118

Query: 108 MVDFACDANGCPILAVSDLAVHTKDLTANPKCSLLVARDPEDRTDLVITLHGDAVSVPEK 167
           MVDFACDANGCPILAVSDLAVH+KDL ANPKCS+L+ARDPEDRTDLVITLHGDA+ VPEK
Sbjct: 119 MVDFACDANGCPILAVSDLAVHSKDLAANPKCSVLLARDPEDRTDLVITLHGDAIFVPEK 178

Query: 168 DKEAVRAAYLARHPNAFWVDFGDFQFVRIKPKTVRFVSGVATA 210
           DKEA+RAAYLARHPNAFWVDFGDF+FVRI+PK VRFVSGVATA
Sbjct: 179 DKEAIRAAYLARHPNAFWVDFGDFRFVRIEPKVVRFVSGVATA 221


>Medtr4g007990.1 | pyridoxamine 5'-phosphate oxidase family protein
           | HC | chr4:1348207-1342323 | 20130731
          Length = 386

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 118/232 (50%), Gaps = 19/232 (8%)

Query: 81  VRTVLDHS----LRGVLSTFSKKYEGYPSGSMVDFACDANGCPILAVSDLAVHTKDLTAN 136
           VR +++ +    L  V+S    + EGYP GS+VDFA D+ G PI + S LA+HT++L A+
Sbjct: 145 VRNLMEQARFAHLCSVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLAD 204

Query: 137 PKCSLLVA-RDPEDRTDLVITLHGDAVSVPEKDKEAVRAAYLARHPNAFWVDFGDFQFVR 195
           P+C+L+V        ++  +T+ GD   + E  +E     Y+A+H       +G+F + R
Sbjct: 205 PRCTLVVQIPGWSGLSNARVTIFGDVYPLSEDQQEWAHKQYIAKHQQGPSQQWGNFYYFR 264

Query: 196 IKPKT-VRFVSGVATALLGSGEFDGDEYKSAKVDPVA-QFSKPVASHMNKDHGEDTKVIV 253
           ++  + + F+ G  T        D  EY++ + D +A    +     +N    +  K ++
Sbjct: 265 MQNISDIYFIGGFGTVAW----VDVKEYETLQPDKIAVDGGEQYLKELNAIFSKPLKKLL 320

Query: 254 QHWTSVPVDFADILDLDCLGFNVKAGYQGDTFKL-RVPFPRRAEDRKDVKTL 304
                + VD A ++ +D  G +++   QG  F + R+ F    ++ + V+TL
Sbjct: 321 S--NEIEVDDAALISIDSKGTDIRV-RQGAQFNIQRISF----DEGQSVETL 365