Miyakogusa Predicted Gene
- Lj1g3v3975020.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3975020.3 Non Characterized Hit- tr|I1N874|I1N874_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33050 PE,76.77,0,YTH,YTH
domain; seg,NULL; YTH DOMAIN-CONTAINING,NULL; YTH (YT521-B HOMOLOGY)
DOMAIN-CONTAINING,NULL,CUFF.31631.3
(652 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g085500.1 | evolutionarily carboxy-terminal region protein... 895 0.0
Medtr6g032970.1 | evolutionarily carboxy-terminal region protein... 622 e-178
Medtr8g088390.1 | evolutionarily carboxy-terminal region protein... 430 e-120
Medtr8g088390.2 | evolutionarily carboxy-terminal region protein... 410 e-114
Medtr4g005110.1 | evolutionarily carboxy-terminal region protein... 285 1e-76
Medtr2g032660.1 | evolutionarily carboxy-terminal region protein... 272 7e-73
Medtr2g063460.1 | evolutionarily carboxy-terminal region protein... 271 2e-72
Medtr4g123630.1 | evolutionarily carboxy-terminal region protein... 271 2e-72
Medtr2g063460.2 | evolutionarily carboxy-terminal region protein... 271 2e-72
Medtr2g005840.3 | evolutionarily carboxy-terminal region protein... 238 2e-62
Medtr2g005840.2 | evolutionarily carboxy-terminal region protein... 238 2e-62
Medtr2g005840.5 | evolutionarily carboxy-terminal region protein... 238 2e-62
Medtr2g005840.1 | evolutionarily carboxy-terminal region protein... 238 2e-62
Medtr2g005840.4 | evolutionarily carboxy-terminal region protein... 238 2e-62
Medtr2g029540.1 | cleavage and polyadenylation specificity facto... 69 1e-11
>Medtr7g085500.1 | evolutionarily carboxy-terminal region protein |
HC | chr7:33129897-33124920 | 20130731
Length = 659
Score = 895 bits (2314), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/666 (69%), Positives = 518/666 (77%), Gaps = 23/666 (3%)
Query: 1 MAPVPPSADKAADLLQNLSLDTNPKT-TGVAEPAKKNGPAFSNGTAKGMTKPLTPNPSFV 59
M V PS+++AA LLQNLSLD+ PKT G AEP KKNGP F+NG AKG KP PNPS+V
Sbjct: 1 MPSVAPSSEQAASLLQNLSLDSQPKTIVGDAEPVKKNGPVFANGAAKGTGKPFNPNPSYV 60
Query: 60 PNXXXXXXXXXXXXXXQNDWNVYSRYMNLDGGMAQGVYGDSCSYMYNQXXXXXXXXXXXX 119
PN + W+ YS Y+NLDGGM QGVYGD+CSYMY+Q
Sbjct: 61 PNGYPSTYYYGGYDGQGD-WSGYSNYVNLDGGMTQGVYGDNCSYMYHQGYGYTPYGAYAS 119
Query: 120 XXXSSPIIQHDXXXXXXXXXXXXXXXXXKSPASADVSFAPNKVSVPQGEIPTAVNADHIP 179
SSP++QHD SP SAD SFAPNK SVPQ E+ TAVNAD I
Sbjct: 120 PNSSSPVVQHDGQMYGLQQYQYPCSYY-NSPTSADGSFAPNKTSVPQREMSTAVNADRI- 177
Query: 180 SSNVMNKGNSVSVANGGDCANKNGLNAILTSSQHNTLNANNSYP-SGMTAYAPLSGYQGP 238
+SNVMNKGNSVS+ NG DC N+NGL A + SSQH +LN +SY S + A APLSGYQGP
Sbjct: 178 TSNVMNKGNSVSMVNG-DCTNQNGLKAFMKSSQHTSLNTKDSYQGSSLPACAPLSGYQGP 236
Query: 239 RMSTQGTQSAVPSDVSLASDRQTKHGAKV----------NFSSQRNQRHPQPLQQFTNLN 288
R+ST G QSA+P+DVSL SDRQ+KHG KV +FSSQRNQRH Q L QF NLN
Sbjct: 237 RLSTHGAQSAIPTDVSLVSDRQSKHGGKVGLSSQVANIKDFSSQRNQRHSQSLPQFMNLN 296
Query: 289 GSGHPSGMDLVSGFMNRMYPSNGIYSHYGNTYRTGSRFGSAAYGYRTGSLDYKSKATGNG 348
GS HPSGM+L+ GFMN MYPSN ++S YG+++R SR+GS+AYG RTGS D K +ATGNG
Sbjct: 297 GSRHPSGMELLPGFMNGMYPSNNLFSQYGSSFRANSRYGSSAYGSRTGSFDNKYRATGNG 356
Query: 349 CV-HDFKRNG--FSELNKGPRAGKSSDSRSVQSLGPVTLLLKGQNLPVKSDNKEVPVVPN 405
V +D +RNG FSELNKGPRA KSSD++SV+S PVTLLLKGQNLPVKSD++ VP+V N
Sbjct: 357 YVANDSRRNGDGFSELNKGPRAAKSSDNKSVKSPEPVTLLLKGQNLPVKSDDEVVPLVLN 416
Query: 406 KEQYNGEDFSDNYSDAKFFVIKSYSEDDIHKSIKYSVWASTPNGNKKLDAAYQEAKEKPG 465
KEQYNGED S+NYSDAKFF+IKSYSEDD+HKSIKYSVWASTPNGNKKLDAAYQEA G
Sbjct: 417 KEQYNGEDLSENYSDAKFFIIKSYSEDDVHKSIKYSVWASTPNGNKKLDAAYQEA----G 472
Query: 466 GCPIFLLFSVNTSGQFVGLAEMVGPVDFGKTVEYWQQDRWTGCFSVKWHFVKDIPNNVLR 525
GCPIFLLFSVNTSGQFVGLAEM GPVDF KTVEYWQQDRWTGCF+VKWH +KDIPN VLR
Sbjct: 473 GCPIFLLFSVNTSGQFVGLAEMTGPVDFDKTVEYWQQDRWTGCFNVKWHIIKDIPNGVLR 532
Query: 526 HITLENNENKPVTNSRDTQEVKFEKGIQIIKIFKEHSSKTSILDDFGFYEAREKATQERK 585
HITLENNENKPVTNSRDTQEVKFEKG+QI+KIFKEH+SKTSILDDFGFYE+REK TQERK
Sbjct: 533 HITLENNENKPVTNSRDTQEVKFEKGVQIVKIFKEHASKTSILDDFGFYESREKTTQERK 592
Query: 586 SKEQQFPKQVNKASDITIGTVTLPKSLDATLTNESATADAAEGRVNAEELLERNGSTTVV 645
KEQQ PKQVNKASDIT G+VTLPKSLD TL ESATADAA+G VN+E LLERNGST
Sbjct: 593 FKEQQLPKQVNKASDITFGSVTLPKSLDTTLMKESATADAAQGNVNSEVLLERNGSTPAF 652
Query: 646 EESAKS 651
E+S+KS
Sbjct: 653 EDSSKS 658
>Medtr6g032970.1 | evolutionarily carboxy-terminal region protein |
HC | chr6:10204106-10209200 | 20130731
Length = 642
Score = 622 bits (1605), Expect = e-178, Method: Compositional matrix adjust.
Identities = 364/667 (54%), Positives = 426/667 (63%), Gaps = 64/667 (9%)
Query: 6 PSADKAADLLQNLSLDT-NPKTTGVAEPAKKNGPAFSNGTAKGMTKPLTPNPSFVPN--- 61
P KAADL+QNLSLD+ P+T V EPAKK G +G A + K PN S+VPN
Sbjct: 9 PDTTKAADLMQNLSLDSAEPRTIAVPEPAKKAG----HGQANEVPKTFNPNASYVPNGHP 64
Query: 62 XXXXXXXXXXXXXXQNDWNVYSRYMNLDGGMAQGVYGDSCSYMYNQXXXXXXXXXXXXXX 121
NDWNVY Y+N +GGMAQGVYGDS SYMY Q
Sbjct: 65 SISYYYGGYDGQGDWNDWNVYQNYVNANGGMAQGVYGDSGSYMYPQGYGYAPYGSYPSPS 124
Query: 122 XSSPIIQHDXXXXXXXXXXXXXXXXXKSPASADVSFAPNKVSVPQGEIPTAVNADHIPSS 181
S + HD + A+ NK +V G+ T V A+H+PSS
Sbjct: 125 TSP-SLPHDDKLYGLQQYQYPSYYQPSASANGTYGATANKTNVHGGKTSTPVTAEHVPSS 183
Query: 182 NVMNKGNSVSVANGGDCANKNGLNAILTSSQHNTLNANNSYPSGMTAYAPLSGYQGPRMS 241
VMNKG++ ++ NG N ++ + G AYAP+SGY G
Sbjct: 184 -VMNKGSTTTMTNGYSSNNNVSNDSYQRA--------------GYAAYAPVSGYAG---- 224
Query: 242 TQGTQSAVPSDVSLASDRQTKHGAKV----------NFSSQRNQRHPQPLQQFTNLNGSG 291
T GTQ + PSD L SDRQ+K+G+K +FSSQRN QPL Q++NL+G
Sbjct: 225 TYGTQPSYPSDPLLFSDRQSKNGSKTGYSTPAVPRKDFSSQRNSSLSQPLPQYSNLHG-- 282
Query: 292 HPSGMDLVSGFMNRMYPSNGIYSHYGNTYRTGSRFGSAAYGYRTGSLD--YKSKATGNGC 349
+ SG+ SG+ N MYPSN +YS YGNTYR GS D Y+S + G G
Sbjct: 283 YSSGLGPYSGYPNGMYPSNTMYSQYGNTYR--------------GSYDNKYRSTSYGRGF 328
Query: 350 VHDFKRN--GFSELNKGPRAGKSSDSRSVQSLGPVTLLLKGQNLPVKSDN-KEVPVVPNK 406
H KRN GF ELNKGPR SSD ++ +SLGPVTLLLKGQ+LP+KSD+ KEV VP+K
Sbjct: 329 DH-VKRNVDGFGELNKGPRGSNSSDDKNDKSLGPVTLLLKGQDLPIKSDDDKEVHPVPDK 387
Query: 407 EQYNGEDFSDNYSDAKFFVIKSYSEDDIHKSIKYSVWASTPNGNKKLDAAYQEAKEKPGG 466
+QY GED S+NYSDAKFFVIKSYSEDDIHKS+KY+VW STPNGNKKLDAAY EAKEK
Sbjct: 388 QQYTGEDLSENYSDAKFFVIKSYSEDDIHKSMKYNVWTSTPNGNKKLDAAYLEAKEKSAD 447
Query: 467 CPIFLLFSVNTSGQFVGLAEMVGPVDFGKTVEYWQQDRWTGCFSVKWHFVKDIPNNVLRH 526
CPIFLLFSVNTSGQFVGLAEMV PVDF +TVEYWQQDRWTGCFSVKW +KDIPNNVLRH
Sbjct: 448 CPIFLLFSVNTSGQFVGLAEMVSPVDFDRTVEYWQQDRWTGCFSVKWRIIKDIPNNVLRH 507
Query: 527 ITLENNENKPVTNSRDTQEVKFEKGIQIIKIFKEHSSKTSILDDFGFYEAREKATQERKS 586
ITLENNENKPVTNSRDTQEVKFEKG++I+KIFKEHSSKT ILDDF FYEAREK QE+K+
Sbjct: 508 ITLENNENKPVTNSRDTQEVKFEKGVEILKIFKEHSSKTCILDDFAFYEAREKTIQEKKA 567
Query: 587 KEQQFPKQVNKASD-ITIGTVTLPKSLDATLTNESATADAAEGRVNAEELLERNGSTTVV 645
KEQ + VNK++D T+GT LPKS D TL NES DAA E+L+E NG T+
Sbjct: 568 KEQLSKEIVNKSNDSATVGTDVLPKSQDGTLVNESVVPDAAG---TGEKLVEANGPTSPT 624
Query: 646 EESAKSC 652
E A S
Sbjct: 625 EPPADSL 631
>Medtr8g088390.1 | evolutionarily carboxy-terminal region protein |
HC | chr8:36620729-36616338 | 20130731
Length = 670
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 273/634 (43%), Positives = 351/634 (55%), Gaps = 79/634 (12%)
Query: 1 MAPVPPSADKAADLLQNLSLDTNPKTTGVAEPAKK------------NG--PAFSNGTAK 46
MA V AD+AA+LLQ SL++ PK+ + EP KK NG P++
Sbjct: 1 MAAVANPADQAAELLQKFSLESQPKSLEIPEPNKKATGNQYDSGNALNGQIPSYERSVTP 60
Query: 47 GMTKPLTPNPSFVPNXXXXXXXXXXXXXXQNDWNVYSRYMNLDG-GMAQGVYGDS-CSYM 104
+ + P ++PN ++W Y+N DG + GVYGD+ S +
Sbjct: 61 VLQDFMDPAMCYLPNGYPSYYYGGYDGT-GSEW----EYLNADGVDLTSGVYGDNGSSLV 115
Query: 105 YNQXXXXXXXXXXXXXXXSSPIIQHDXXXXXXXXXXXXXXXXXKSPASADVSFAPNKVSV 164
Y+ P + +D +P S F P +
Sbjct: 116 YHHGYGYAPYAPYSPAGSPVPTMGNDGQLYGPQHYQYPPFFQPLTPTSG--PFTPTSAAH 173
Query: 165 PQGEIPTAVNADHIPSSNVMNKGNSVSVANGGDCANKNGLNAILTSSQHNTLNANNSYPS 224
PQG+ T+V AD P S V ANG A NG+NA
Sbjct: 174 PQGDNSTSVAADQKPLS--------VEAANGNTNAGTNGVNA-----------------K 208
Query: 225 GMTAYAPLSGYQGPRMSTQGTQSA-VPSDVSLASDRQTKHGAKV----------NFSSQR 273
G T + GYQ PR G +S + D + SD Q + + N ++ R
Sbjct: 209 GRTPTS--GGYQDPRYGFDGARSPNLWLDTPIFSDGQPRPVSSTVISSSISSGNNGTASR 266
Query: 274 NQRHPQPLQQFTNLNGSGHPSGMDLVSGFMNRMYPSNGIYSHYGNTYRTGSRFGSAAYGY 333
NQ + +P Q+ L+ M GF+NRMYP N Y YGN+ R+G +G+ Y
Sbjct: 267 NQTY-RPNSQYMGLHHPRPIPAMGATPGFINRMYP-NTRYGQYGNSVRSGMGYGTHGYDS 324
Query: 334 RTG-----SLDYKSKATG-NGCVHDF---KRNGFSELNKGPRAGKSSDSRSVQSLGPVTL 384
RT ++D K K G NG + +G +ELN+GPRA ++ + P L
Sbjct: 325 RTNGRAWLAVDNKYKTRGRNGGYFGYGNENTDGLNELNRGPRA---KGGKNQKVFVPTVL 381
Query: 385 LLKGQNLPVKSDNKEVP---VVPNKEQYNGEDFSDNYSDAKFFVIKSYSEDDIHKSIKYS 441
+KGQN+PV + ++E P++EQYN DF + Y+DAKFFVIKSYSEDDIHKSIKY+
Sbjct: 382 TVKGQNVPVNTVDEEKEKNSTTPDREQYNKADFPEEYTDAKFFVIKSYSEDDIHKSIKYN 441
Query: 442 VWASTPNGNKKLDAAYQEAKEKPGGCPIFLLFSVNTSGQFVGLAEMVGPVDFGKTVEYWQ 501
VWAST NGNKKLDAAYQEA++K GGCPIFLLFSVNTSGQFVGLAEM GPVDF K++EYWQ
Sbjct: 442 VWASTQNGNKKLDAAYQEAQQKSGGCPIFLLFSVNTSGQFVGLAEMTGPVDFNKSLEYWQ 501
Query: 502 QDRWTGCFSVKWHFVKDIPNNVLRHITLENNENKPVTNSRDTQEVKFEKGIQIIKIFKEH 561
QD+W GCF +KWH VKD+PNNVLRHITLENNENKPVTNSRDTQE+ E G++++KIFKE+
Sbjct: 502 QDKWMGCFPLKWHIVKDVPNNVLRHITLENNENKPVTNSRDTQEIMLEPGLKLLKIFKEY 561
Query: 562 SSKTSILDDFGFYEAREKATQERKSKEQQFPKQV 595
SSKT ILDDFGFYE R+K E+K+K QQFPKQV
Sbjct: 562 SSKTCILDDFGFYEGRQKTILEKKAK-QQFPKQV 594
>Medtr8g088390.2 | evolutionarily carboxy-terminal region protein |
HC | chr8:36620643-36616338 | 20130731
Length = 605
Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust.
Identities = 248/537 (46%), Positives = 312/537 (58%), Gaps = 60/537 (11%)
Query: 84 RYMNLDG-GMAQGVYGDS-CSYMYNQXXXXXXXXXXXXXXXSSPIIQHDXXXXXXXXXXX 141
Y+N DG + GVYGD+ S +Y+ P + +D
Sbjct: 28 EYLNADGVDLTSGVYGDNGSSLVYHHGYGYAPYAPYSPAGSPVPTMGNDGQLYGPQHYQY 87
Query: 142 XXXXXXKSPASADVSFAPNKVSVPQGEIPTAVNADHIPSSNVMNKGNSVSVANGGDCANK 201
+P S F P + PQG+ T+V AD P S V ANG A
Sbjct: 88 PPFFQPLTPTSG--PFTPTSAAHPQGDNSTSVAADQKPLS--------VEAANGNTNAGT 137
Query: 202 NGLNAILTSSQHNTLNANNSYPSGMTAYAPLSGYQGPRMSTQGTQSA-VPSDVSLASDRQ 260
NG+NA G T + GYQ PR G +S + D + SD Q
Sbjct: 138 NGVNA-----------------KGRTPTS--GGYQDPRYGFDGARSPNLWLDTPIFSDGQ 178
Query: 261 TKHGAKV----------NFSSQRNQRHPQPLQQFTNLNGSGHPSGMDLVSGFMNRMYPSN 310
+ + N ++ RNQ + +P Q+ L+ M GF+NRMYP N
Sbjct: 179 PRPVSSTVISSSISSGNNGTASRNQTY-RPNSQYMGLHHPRPIPAMGATPGFINRMYP-N 236
Query: 311 GIYSHYGNTYRTGSRFGSAAYGYRTG-----SLDYKSKATG-NGCVHDF---KRNGFSEL 361
Y YGN+ R+G +G+ Y RT ++D K K G NG + +G +EL
Sbjct: 237 TRYGQYGNSVRSGMGYGTHGYDSRTNGRAWLAVDNKYKTRGRNGGYFGYGNENTDGLNEL 296
Query: 362 NKGPRAGKSSDSRSVQSLGPVTLLLKGQNLPVKSDNKEVP---VVPNKEQYNGEDFSDNY 418
N+GPRA ++ + P L +KGQN+PV + ++E P++EQYN DF + Y
Sbjct: 297 NRGPRA---KGGKNQKVFVPTVLTVKGQNVPVNTVDEEKEKNSTTPDREQYNKADFPEEY 353
Query: 419 SDAKFFVIKSYSEDDIHKSIKYSVWASTPNGNKKLDAAYQEAKEKPGGCPIFLLFSVNTS 478
+DAKFFVIKSYSEDDIHKSIKY+VWAST NGNKKLDAAYQEA++K GGCPIFLLFSVNTS
Sbjct: 354 TDAKFFVIKSYSEDDIHKSIKYNVWASTQNGNKKLDAAYQEAQQKSGGCPIFLLFSVNTS 413
Query: 479 GQFVGLAEMVGPVDFGKTVEYWQQDRWTGCFSVKWHFVKDIPNNVLRHITLENNENKPVT 538
GQFVGLAEM GPVDF K++EYWQQD+W GCF +KWH VKD+PNNVLRHITLENNENKPVT
Sbjct: 414 GQFVGLAEMTGPVDFNKSLEYWQQDKWMGCFPLKWHIVKDVPNNVLRHITLENNENKPVT 473
Query: 539 NSRDTQEVKFEKGIQIIKIFKEHSSKTSILDDFGFYEAREKATQERKSKEQQFPKQV 595
NSRDTQE+ E G++++KIFKE+SSKT ILDDFGFYE R+K E+K+K QQFPKQV
Sbjct: 474 NSRDTQEIMLEPGLKLLKIFKEYSSKTCILDDFGFYEGRQKTILEKKAK-QQFPKQV 529
>Medtr4g005110.1 | evolutionarily carboxy-terminal region protein |
HC | chr4:57104-67136 | 20130731
Length = 642
Score = 285 bits (729), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/302 (50%), Positives = 192/302 (63%), Gaps = 26/302 (8%)
Query: 308 PSNGIYSHYGNTYRTGSRFGSAAYGYRTGSLDYKSKATGNGCVHDFKRN--GFSELNKGP 365
PS G+ SH R+ FGS++ Y G L + G + N F L
Sbjct: 268 PSAGMASH---QQRSLYGFGSSSNPYGRGYLSNPGSSFGGSAISGLSANDRSFLSLENSR 324
Query: 366 RAGKSS----------DSRSVQSLGPVTLLLKGQNLPVKSDNKEVPVVPNK--------E 407
R G+ + D S Q+ GP LK + S+N + N E
Sbjct: 325 RHGRETASFCRCNGTLDILSEQNRGPRASKLKNH---ISSENNAIDGSKNNASTAKFQDE 381
Query: 408 QYNGEDFSDNYSDAKFFVIKSYSEDDIHKSIKYSVWASTPNGNKKLDAAYQEAKEKPGGC 467
N DF+ ++ DAKFFVIKSYSED++HKSIKY VWASTPNGN+KLDAAY +AKEK C
Sbjct: 382 SLNRPDFATDFKDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYCQAKEKQDAC 441
Query: 468 PIFLLFSVNTSGQFVGLAEMVGPVDFGKTVEYWQQDRWTGCFSVKWHFVKDIPNNVLRHI 527
IFL FSVN S QF G+AEMVGPV+F K+V++WQQD+W+G F VKWH +KD+PN+ RHI
Sbjct: 442 RIFLFFSVNASAQFCGVAEMVGPVNFDKSVDFWQQDKWSGQFPVKWHIIKDVPNSQFRHI 501
Query: 528 TLENNENKPVTNSRDTQEVKFEKGIQIIKIFKEHSSKTSILDDFGFYEAREKATQERKSK 587
LENN+NKPVTNSRDTQEVK ++GI+++ IFK + + TSILDDF FYE R+KA QERK++
Sbjct: 502 VLENNDNKPVTNSRDTQEVKLQQGIEMLTIFKNYETDTSILDDFDFYEDRQKAMQERKAR 561
Query: 588 EQ 589
+Q
Sbjct: 562 QQ 563
>Medtr2g032660.1 | evolutionarily carboxy-terminal region protein |
HC | chr2:12289044-12294565 | 20130731
Length = 694
Score = 272 bits (696), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 135/265 (50%), Positives = 179/265 (67%), Gaps = 14/265 (5%)
Query: 334 RTGSLDYKSKATGNGCVHDFKRNGFSELNKGPRAGK-SSDSRSVQSLGPVT------LLL 386
R+G D+ + A G V + L G G S+D Q+ GP T L +
Sbjct: 275 RSGFSDFAANANGQSSVAKLRPKA---LGLGSSDGNVSADVLGDQNRGPRTSRSKHQLSV 331
Query: 387 KGQNLPVKSDNKEVPVVPNKEQYNGEDFSDNYSDAKFFVIKSYSEDDIHKSIKYSVWAST 446
K V N++ ++ +QYN EDF +Y +AKFFVIKSYSEDD+HKSIKY+VW+ST
Sbjct: 332 KAYTTKVGGGNEQDSIIIYTDQYNKEDFPLDYDNAKFFVIKSYSEDDVHKSIKYNVWSST 391
Query: 447 PNGNKKLDAAYQEAK----EKPGGCPIFLLFSVNTSGQFVGLAEMVGPVDFGKTVEYWQQ 502
+GN+KL AY++ K EK G CPIFL FSVN SGQF G+AEM+G VDF K +++WQQ
Sbjct: 392 VHGNRKLGNAYEDTKKVSAEKSGVCPIFLFFSVNASGQFCGVAEMIGSVDFNKDMDFWQQ 451
Query: 503 DRWTGCFSVKWHFVKDIPNNVLRHITLENNENKPVTNSRDTQEVKFEKGIQIIKIFKEHS 562
D+W+G F VKWH +KD+PN RHI L+NNENKPVTNSRDTQE+ + KG++++KIFK H+
Sbjct: 452 DKWSGSFPVKWHIIKDVPNPNFRHIILDNNENKPVTNSRDTQEIMYSKGLEMLKIFKNHT 511
Query: 563 SKTSILDDFGFYEAREKATQERKSK 587
KTS+LDDF +YE R+K ++K+K
Sbjct: 512 LKTSLLDDFMYYENRQKIMHDQKAK 536
>Medtr2g063460.1 | evolutionarily carboxy-terminal region protein |
HC | chr2:26745358-26750617 | 20130731
Length = 584
Score = 271 bits (693), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/263 (52%), Positives = 177/263 (67%), Gaps = 13/263 (4%)
Query: 357 GFSELNKGPRAGKSSDSRSVQSLGPVTLLLKGQ-----NLPVKSDNKEVPVVPNKEQYNG 411
G+ K K +DS + Q+ GP T KG N KS N + +QYN
Sbjct: 307 GWVSTEKLKLRSKVNDSLNEQNQGPRTANAKGTLNSGGNSEDKSVNGNTKI--RTDQYNL 364
Query: 412 EDFSDNYSDAKFFVIKSYSEDDIHKSIKYSVWASTPNGNKKLDAAYQEAK----EKPGGC 467
DF Y A FFVIKSYSEDD+HKSIKY VWASTPNGNK+LD A+Q+A+ EK C
Sbjct: 365 PDFPTKYDHALFFVIKSYSEDDVHKSIKYDVWASTPNGNKRLDNAFQDAQNRMEEKGSKC 424
Query: 468 PIFLLFSVNTSGQFVGLAEMVGPVDFGKTVEYWQQDRWTGCFSVKWHFVKDIPNNVLRHI 527
P+FL FSVN SGQF G+AEM+G VDF K++++WQQD+W G F VKWH +KDIPN LRHI
Sbjct: 425 PVFLFFSVNASGQFCGVAEMIGRVDFNKSMDFWQQDKWNGYFPVKWHIIKDIPNPQLRHI 484
Query: 528 TLENNENKPVTNSRDTQEVKFEKGIQIIKIFKEHSSKTSILDDFGFYEAREKATQERKSK 587
LENN++KPVTNSRDTQE+ F +GI+++ IFK + S+TSILDDF FYE+R+K QE+K +
Sbjct: 485 ILENNDHKPVTNSRDTQEIHFPQGIEMLNIFKNYVSRTSILDDFDFYESRQKVMQEKKIR 544
Query: 588 EQQFPKQVNKASDIT--IGTVTL 608
+ V D+T +G+V +
Sbjct: 545 QPMPHTNVQHIEDLTSALGSVDI 567
>Medtr4g123630.1 | evolutionarily carboxy-terminal region protein |
HC | chr4:50901357-50896559 | 20130731
Length = 651
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 140/275 (50%), Positives = 177/275 (64%), Gaps = 40/275 (14%)
Query: 336 GSLDYKSKATGNGC-------VH----DFKRNG--FSELNKGPRAGKSSDSRSVQSLGPV 382
G DY S A G VH D R+G E N+GPR +
Sbjct: 245 GFSDYGSNANGQSAIAKLRPKVHVAPIDVNRSGVLLGEQNRGPRISRPK----------- 293
Query: 383 TLLLKGQNLPVKS------DNKEVPVVPNKEQYNGEDFSDNYSDAKFFVIKSYSEDDIHK 436
+LP+K+ D + +QYN EDF + AKFFVIKSYSEDD+HK
Sbjct: 294 ------HHLPIKAYTAKSGDANTQENIIYTDQYNREDFPIDNEIAKFFVIKSYSEDDVHK 347
Query: 437 SIKYSVWASTPNGNKKLDAAYQEAKEKP----GGCPIFLLFSVNTSGQFVGLAEMVGPVD 492
SIKY+VW+STP+GNKKL +AY++A+ K GGCPIFL FSVN SGQF G+AEMVGPVD
Sbjct: 348 SIKYNVWSSTPHGNKKLQSAYEDARRKATGKSGGCPIFLFFSVNASGQFCGVAEMVGPVD 407
Query: 493 FGKTVEYWQQDRWTGCFSVKWHFVKDIPNNVLRHITLENNENKPVTNSRDTQEVKFEKGI 552
F K +++WQQD+W+G F VKWH +KD+PN RHI LENNE KPVTNSRDTQE+ + KG+
Sbjct: 408 FNKDMDFWQQDKWSGSFPVKWHIIKDVPNGNFRHIILENNEFKPVTNSRDTQEIMYRKGL 467
Query: 553 QIIKIFKEHSSKTSILDDFGFYEAREKATQERKSK 587
+++KIFK ++ KTS+LDDF +YE R+K QE K+K
Sbjct: 468 EMLKIFKNYTLKTSLLDDFIYYENRQKVMQEEKTK 502
>Medtr2g063460.2 | evolutionarily carboxy-terminal region protein |
HC | chr2:26745358-26750617 | 20130731
Length = 582
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/263 (52%), Positives = 177/263 (67%), Gaps = 13/263 (4%)
Query: 357 GFSELNKGPRAGKSSDSRSVQSLGPVTLLLKGQ-----NLPVKSDNKEVPVVPNKEQYNG 411
G+ K K +DS + Q+ GP T KG N KS N + +QYN
Sbjct: 305 GWVSTEKLKLRSKVNDSLNEQNQGPRTANAKGTLNSGGNSEDKSVNGNTKI--RTDQYNL 362
Query: 412 EDFSDNYSDAKFFVIKSYSEDDIHKSIKYSVWASTPNGNKKLDAAYQEAK----EKPGGC 467
DF Y A FFVIKSYSEDD+HKSIKY VWASTPNGNK+LD A+Q+A+ EK C
Sbjct: 363 PDFPTKYDHALFFVIKSYSEDDVHKSIKYDVWASTPNGNKRLDNAFQDAQNRMEEKGSKC 422
Query: 468 PIFLLFSVNTSGQFVGLAEMVGPVDFGKTVEYWQQDRWTGCFSVKWHFVKDIPNNVLRHI 527
P+FL FSVN SGQF G+AEM+G VDF K++++WQQD+W G F VKWH +KDIPN LRHI
Sbjct: 423 PVFLFFSVNASGQFCGVAEMIGRVDFNKSMDFWQQDKWNGYFPVKWHIIKDIPNPQLRHI 482
Query: 528 TLENNENKPVTNSRDTQEVKFEKGIQIIKIFKEHSSKTSILDDFGFYEAREKATQERKSK 587
LENN++KPVTNSRDTQE+ F +GI+++ IFK + S+TSILDDF FYE+R+K QE+K +
Sbjct: 483 ILENNDHKPVTNSRDTQEIHFPQGIEMLNIFKNYVSRTSILDDFDFYESRQKVMQEKKIR 542
Query: 588 EQQFPKQVNKASDIT--IGTVTL 608
+ V D+T +G+V +
Sbjct: 543 QPMPHTNVQHIEDLTSALGSVDI 565
>Medtr2g005840.3 | evolutionarily carboxy-terminal region protein |
HC | chr2:345315-338760 | 20130731
Length = 481
Score = 238 bits (606), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 162/238 (68%), Gaps = 20/238 (8%)
Query: 361 LNKGPRAGKSSDSRSVQSLGPVTLLLKGQNLPVKSDNKEVPVVPN-------KEQYNGED 413
L++ R+G+S S+ + +G ++ N E VV + ++QYN D
Sbjct: 193 LSEKFRSGESEMSKEI---------TRGPRFHQRNSNPESSVVKDEFAFTVCRDQYNLPD 243
Query: 414 FSDNYSDAKFFVIKSYSEDDIHKSIKYSVWASTPNGNKKLDAAYQEAKEKPGG----CPI 469
F Y AKF++IKS++EDDIHK IKY VW STP+GNKKL+AA+Q A+ K CPI
Sbjct: 244 FQTKYETAKFYMIKSFNEDDIHKGIKYDVWTSTPHGNKKLNAAFQNAEAKLSQTGTQCPI 303
Query: 470 FLLFSVNTSGQFVGLAEMVGPVDFGKTVEYWQQDRWTGCFSVKWHFVKDIPNNVLRHITL 529
FL FSVN SGQFVG+AEM+GPVDF K +++W+ D++ G F +KWH +KD+PN HITL
Sbjct: 304 FLFFSVNASGQFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWHIIKDVPNRQFAHITL 363
Query: 530 ENNENKPVTNSRDTQEVKFEKGIQIIKIFKEHSSKTSILDDFGFYEAREKATQERKSK 587
+ NENK VT SRDTQE+ ++G++++KIFK + +KTS+LDDF FYE REK + ++++
Sbjct: 364 QINENKCVTFSRDTQEITLKEGLEMLKIFKSYPAKTSLLDDFDFYENREKLCRSQRTE 421
>Medtr2g005840.2 | evolutionarily carboxy-terminal region protein |
HC | chr2:345315-338760 | 20130731
Length = 481
Score = 238 bits (606), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 162/238 (68%), Gaps = 20/238 (8%)
Query: 361 LNKGPRAGKSSDSRSVQSLGPVTLLLKGQNLPVKSDNKEVPVVPN-------KEQYNGED 413
L++ R+G+S S+ + +G ++ N E VV + ++QYN D
Sbjct: 193 LSEKFRSGESEMSKEI---------TRGPRFHQRNSNPESSVVKDEFAFTVCRDQYNLPD 243
Query: 414 FSDNYSDAKFFVIKSYSEDDIHKSIKYSVWASTPNGNKKLDAAYQEAKEKPGG----CPI 469
F Y AKF++IKS++EDDIHK IKY VW STP+GNKKL+AA+Q A+ K CPI
Sbjct: 244 FQTKYETAKFYMIKSFNEDDIHKGIKYDVWTSTPHGNKKLNAAFQNAEAKLSQTGTQCPI 303
Query: 470 FLLFSVNTSGQFVGLAEMVGPVDFGKTVEYWQQDRWTGCFSVKWHFVKDIPNNVLRHITL 529
FL FSVN SGQFVG+AEM+GPVDF K +++W+ D++ G F +KWH +KD+PN HITL
Sbjct: 304 FLFFSVNASGQFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWHIIKDVPNRQFAHITL 363
Query: 530 ENNENKPVTNSRDTQEVKFEKGIQIIKIFKEHSSKTSILDDFGFYEAREKATQERKSK 587
+ NENK VT SRDTQE+ ++G++++KIFK + +KTS+LDDF FYE REK + ++++
Sbjct: 364 QINENKCVTFSRDTQEITLKEGLEMLKIFKSYPAKTSLLDDFDFYENREKLCRSQRTE 421
>Medtr2g005840.5 | evolutionarily carboxy-terminal region protein |
HC | chr2:345315-338762 | 20130731
Length = 481
Score = 238 bits (606), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 162/238 (68%), Gaps = 20/238 (8%)
Query: 361 LNKGPRAGKSSDSRSVQSLGPVTLLLKGQNLPVKSDNKEVPVVPN-------KEQYNGED 413
L++ R+G+S S+ + +G ++ N E VV + ++QYN D
Sbjct: 193 LSEKFRSGESEMSKEI---------TRGPRFHQRNSNPESSVVKDEFAFTVCRDQYNLPD 243
Query: 414 FSDNYSDAKFFVIKSYSEDDIHKSIKYSVWASTPNGNKKLDAAYQEAKEKPGG----CPI 469
F Y AKF++IKS++EDDIHK IKY VW STP+GNKKL+AA+Q A+ K CPI
Sbjct: 244 FQTKYETAKFYMIKSFNEDDIHKGIKYDVWTSTPHGNKKLNAAFQNAEAKLSQTGTQCPI 303
Query: 470 FLLFSVNTSGQFVGLAEMVGPVDFGKTVEYWQQDRWTGCFSVKWHFVKDIPNNVLRHITL 529
FL FSVN SGQFVG+AEM+GPVDF K +++W+ D++ G F +KWH +KD+PN HITL
Sbjct: 304 FLFFSVNASGQFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWHIIKDVPNRQFAHITL 363
Query: 530 ENNENKPVTNSRDTQEVKFEKGIQIIKIFKEHSSKTSILDDFGFYEAREKATQERKSK 587
+ NENK VT SRDTQE+ ++G++++KIFK + +KTS+LDDF FYE REK + ++++
Sbjct: 364 QINENKCVTFSRDTQEITLKEGLEMLKIFKSYPAKTSLLDDFDFYENREKLCRSQRTE 421
>Medtr2g005840.1 | evolutionarily carboxy-terminal region protein |
HC | chr2:345315-338762 | 20130731
Length = 512
Score = 238 bits (606), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 162/238 (68%), Gaps = 20/238 (8%)
Query: 361 LNKGPRAGKSSDSRSVQSLGPVTLLLKGQNLPVKSDNKEVPVVPN-------KEQYNGED 413
L++ R+G+S S+ + +G ++ N E VV + ++QYN D
Sbjct: 224 LSEKFRSGESEMSKEI---------TRGPRFHQRNSNPESSVVKDEFAFTVCRDQYNLPD 274
Query: 414 FSDNYSDAKFFVIKSYSEDDIHKSIKYSVWASTPNGNKKLDAAYQEAKEKPGG----CPI 469
F Y AKF++IKS++EDDIHK IKY VW STP+GNKKL+AA+Q A+ K CPI
Sbjct: 275 FQTKYETAKFYMIKSFNEDDIHKGIKYDVWTSTPHGNKKLNAAFQNAEAKLSQTGTQCPI 334
Query: 470 FLLFSVNTSGQFVGLAEMVGPVDFGKTVEYWQQDRWTGCFSVKWHFVKDIPNNVLRHITL 529
FL FSVN SGQFVG+AEM+GPVDF K +++W+ D++ G F +KWH +KD+PN HITL
Sbjct: 335 FLFFSVNASGQFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWHIIKDVPNRQFAHITL 394
Query: 530 ENNENKPVTNSRDTQEVKFEKGIQIIKIFKEHSSKTSILDDFGFYEAREKATQERKSK 587
+ NENK VT SRDTQE+ ++G++++KIFK + +KTS+LDDF FYE REK + ++++
Sbjct: 395 QINENKCVTFSRDTQEITLKEGLEMLKIFKSYPAKTSLLDDFDFYENREKLCRSQRTE 452
>Medtr2g005840.4 | evolutionarily carboxy-terminal region protein |
HC | chr2:345315-338762 | 20130731
Length = 512
Score = 238 bits (606), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 162/238 (68%), Gaps = 20/238 (8%)
Query: 361 LNKGPRAGKSSDSRSVQSLGPVTLLLKGQNLPVKSDNKEVPVVPN-------KEQYNGED 413
L++ R+G+S S+ + +G ++ N E VV + ++QYN D
Sbjct: 224 LSEKFRSGESEMSKEI---------TRGPRFHQRNSNPESSVVKDEFAFTVCRDQYNLPD 274
Query: 414 FSDNYSDAKFFVIKSYSEDDIHKSIKYSVWASTPNGNKKLDAAYQEAKEKPGG----CPI 469
F Y AKF++IKS++EDDIHK IKY VW STP+GNKKL+AA+Q A+ K CPI
Sbjct: 275 FQTKYETAKFYMIKSFNEDDIHKGIKYDVWTSTPHGNKKLNAAFQNAEAKLSQTGTQCPI 334
Query: 470 FLLFSVNTSGQFVGLAEMVGPVDFGKTVEYWQQDRWTGCFSVKWHFVKDIPNNVLRHITL 529
FL FSVN SGQFVG+AEM+GPVDF K +++W+ D++ G F +KWH +KD+PN HITL
Sbjct: 335 FLFFSVNASGQFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWHIIKDVPNRQFAHITL 394
Query: 530 ENNENKPVTNSRDTQEVKFEKGIQIIKIFKEHSSKTSILDDFGFYEAREKATQERKSK 587
+ NENK VT SRDTQE+ ++G++++KIFK + +KTS+LDDF FYE REK + ++++
Sbjct: 395 QINENKCVTFSRDTQEITLKEGLEMLKIFKSYPAKTSLLDDFDFYENREKLCRSQRTE 452
>Medtr2g029540.1 | cleavage and polyadenylation specificity factor
CPSF30 | HC | chr2:11072135-11082678 | 20130731
Length = 683
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 10/142 (7%)
Query: 421 AKFFVIKSYSEDDIHKSIKYSVWASTPNGNKKLDAAYQEAKEKPGGCPIFLLFSVNTSGQ 480
+++F++KS + +++ S++ VWA+ + KL+ A+ + + L+FSVN +
Sbjct: 259 SRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVEN------VILIFSVNRTRH 312
Query: 481 FVGLAEMVGPVDFGKTVEYWQQDRWTGC----FSVKWHFVKDIPNNVLRHITLENNENKP 536
F G A+M + W+ T FSVKW + ++ + RH+ NEN P
Sbjct: 313 FQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 372
Query: 537 VTNSRDTQEVKFEKGIQIIKIF 558
V SRD QE++ G Q+ +
Sbjct: 373 VKISRDCQELEPSIGEQLASLL 394