Miyakogusa Predicted Gene

Lj1g3v3975010.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3975010.1 Non Characterized Hit- tr|Q8LBH1|Q8LBH1_ARATH
Putative uncharacterized protein OS=Arabidopsis thalia,26.52,4e-18,no
description,Glycoside hydrolase-type carbohydrate-binding, subgroup;
seg,NULL; OS03G0158300 PROTE,CUFF.31624.1
         (357 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g085490.1 | NDH-dependent cyclic electron flow protein, pu...   597   e-171
Medtr6g032880.1 | NDH-dependent cyclic electron flow protein, pu...   111   1e-24

>Medtr7g085490.1 | NDH-dependent cyclic electron flow protein,
           putative | HC | chr7:33122962-33120961 | 20130731
          Length = 355

 Score =  597 bits (1538), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 289/357 (80%), Positives = 320/357 (89%), Gaps = 2/357 (0%)

Query: 1   MASFLSLSLPKLNLIKXXXXXXXXXXXXXXPEALNEKFGRKGIKFLESDNNIPIVELTVR 60
           MASFLSLSLPKLNLIK              PEALN+KFGRKGIKFLES N+IPIVELTVR
Sbjct: 1   MASFLSLSLPKLNLIKASSAATTTTPLST-PEALNDKFGRKGIKFLES-NSIPIVELTVR 58

Query: 61  NGSSLSLRIPDAHVTSYKPKVFWKDDGFEEVLYTVPATESGLYKAKGGIGLVLNEVLQPG 120
           NGSSLSLR+PDAHVTSYKPKVFWKDDG EE+LYT+PA E+GLYKAKGGIGLVLNEVLQPG
Sbjct: 59  NGSSLSLRLPDAHVTSYKPKVFWKDDGLEELLYTIPANETGLYKAKGGIGLVLNEVLQPG 118

Query: 121 AKGVLPSTLEWNVVDIEFDSIDALQVELSCTSRFFDLTYVVTLYPVSMATAVIVKNKAPK 180
           AK +LPSTLEW V D+++D+IDALQVEL  T+RFFD+TY+V+LYPVSMATAVIVKNK+PK
Sbjct: 119 AKELLPSTLEWTVKDVDYDAIDALQVELISTNRFFDMTYIVSLYPVSMATAVIVKNKSPK 178

Query: 181 PVTLTNAILSHLRFKRRSGTAIQGLRRCSYISHPPLASPFQVLTPSEAMISEPPGWLSFG 240
           PVTLTNAILSH RFKRR G AI+GL+ CSY SHPPL SPFQ+LTPSEAM SE    +SFG
Sbjct: 179 PVTLTNAILSHFRFKRRGGAAIKGLQTCSYCSHPPLDSPFQILTPSEAMKSESQRLISFG 238

Query: 241 AEPEVSPGSWTQQGVPITLLENKMSRVYAAPPKERSKAFFNTPPSKYETIDQGRELCFRV 300
           AEPE+ PGSWTQQGVPITLLENKMSRV+AAPPKER+KAF+NTPPSKYE IDQGRE+ +RV
Sbjct: 239 AEPEMKPGSWTQQGVPITLLENKMSRVFAAPPKERTKAFYNTPPSKYEIIDQGREIFYRV 298

Query: 301 IRMGFEDIYVSSPGSLSEKHGKDYFVCTGPASILVPVTVNPGEEWRGAQVIEHDNLS 357
           IRMGFEDIYVSSPGS+S+K+G+DYFVCTGPASIL PVTVNPGEE+RGAQVIEHDNLS
Sbjct: 299 IRMGFEDIYVSSPGSMSDKYGRDYFVCTGPASILEPVTVNPGEEFRGAQVIEHDNLS 355


>Medtr6g032880.1 | NDH-dependent cyclic electron flow protein,
           putative | HC | chr6:10218946-10221178 | 20130731
          Length = 386

 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 155/333 (46%), Gaps = 12/333 (3%)

Query: 32  EALNEKFGRKGIKFLESDNNIPIVELTVRNGSSLSLRIPDAHVTSYKPKVFWKDDGFEEV 91
           + L ++F   G+ F E   +  + ++ ++NGS  ++ +P   +TSYK  + W     E +
Sbjct: 58  DYLEQEFNGHGVTFEEVGGSC-MAKMELKNGSIATMLLPSGLITSYKAPM-WHGGKVELL 115

Query: 92  LYTVPATESGLYKAKGGIGLVLN-EVLQPGAKGVLPSTLEWNVVDIEFDSIDALQVELSC 150
              V   E G    +GG+ L  N +        V  S   W + +I+ +S +++QV L  
Sbjct: 116 NTAVSEGEFGDAVIQGGVSLNFNLQTHDDNDDEVSWSPSNWVLHNIKGNSEESIQVVLIN 175

Query: 151 TSRF--FDLTYVVTLYPVSMATAVIVKNKAPKPVTLTNAILSHLRFKRRSGTAIQGLRRC 208
              +    L Y+VTL    + + + + N    P+ +T +ILSHL       T   GL R 
Sbjct: 176 KGPYDKIGLKYIVTLEEDGLGSELEISNSNSLPLQMTGSILSHLTVSTPEATYAIGLERS 235

Query: 209 SYISHPPLASPFQVLTPSEAMISEPPG--WLSFGAE--PEVSPGSWTQQGVPITLLENKM 264
           +Y S PP+ S F +L+P +++  +  G  W S   +  P     S   +      +  + 
Sbjct: 236 NYYSRPPIESEF-ILSPPDSIEEKGFGKIWKSSVKQFLPSWGTDSQNNEAEDSEDMSGEE 294

Query: 265 SRVYAAPPKERSKAFFNTPPSKYETIDQGRELCFRVIRMGFEDIYVSSPGSLS-EKHGKD 323
              Y    KER    +   P  +  ID+GR     V R GF++ Y+ SPGS   E + K 
Sbjct: 295 MDTYKQ-LKERISLVYTNAPRSFTLIDRGRRNSVLVGRNGFDETYLFSPGSSGIESYSKY 353

Query: 324 YFVCTGPASILVPVTVNPGEEWRGAQVIEHDNL 356
            ++C G A++L P+ ++P + W+G   + + N+
Sbjct: 354 AYICVGQAAVLQPIVLSPQDVWKGGAYLHNPNI 386