Miyakogusa Predicted Gene

Lj1g3v3974980.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3974980.1 Non Characterized Hit- tr|I3ST78|I3ST78_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.89,0,coiled-coil,NULL; seg,NULL; no description,Zinc finger,
RING/FYVE/PHD-type; PHD ZN FINGER-CONTAINING,CUFF.31623.1
         (270 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g085450.1 | PHD finger-like protein | HC | chr7:33106030-3...   456   e-128
Medtr1g046460.1 | PHD finger-like protein | HC | chr1:17511838-1...   119   4e-27

>Medtr7g085450.1 | PHD finger-like protein | HC |
           chr7:33106030-33108687 | 20130731
          Length = 263

 Score =  456 bits (1173), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 226/270 (83%), Positives = 235/270 (87%), Gaps = 7/270 (2%)

Query: 1   MAIARTGVYVDDYLEYANTLPAELQRLLNTVRELDERSQSMINQTRQQTKYCMGFSSHGS 60
           MAIARTGVYVDDYLEYANTLPAELQRLLNTVRELDERSQSMINQTRQQTKYCMGFSSHGS
Sbjct: 1   MAIARTGVYVDDYLEYANTLPAELQRLLNTVRELDERSQSMINQTRQQTKYCMGFSSHGS 60

Query: 61  RKGXXXXXXXXXXXXEDDDAAIEKMRKDIETYQDNALSLCTEKVLLARQAYELIDSHVKR 120
           +KG            EDDDA+IEKMRK+IE  QD+ALSLCTEKVLLARQAYELIDSHVKR
Sbjct: 61  KKGNHNYNNNYMN--EDDDASIEKMRKEIEANQDSALSLCTEKVLLARQAYELIDSHVKR 118

Query: 121 LDEDLNNFAEDLKQEGKIAQDEPAILPPLPIVPKPEKRRQVVYGTPQSKXXXXXXXXXXX 180
           LDEDL  FAEDLKQEGKI+QDEPAILPPLPIVPKPEKRR   YGTPQSK           
Sbjct: 119 LDEDLTYFAEDLKQEGKISQDEPAILPPLPIVPKPEKRRHA-YGTPQSKRLDYRERDWDR 177

Query: 181 XXXXXFELMPPPGSHKKDYVIPMDVDQPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEW 240
                FELMPPPGSHKKDY+IPMD+DQPIDPNEPTYCVCHQVSFGDMIACDNENC+GGEW
Sbjct: 178 D----FELMPPPGSHKKDYMIPMDIDQPIDPNEPTYCVCHQVSFGDMIACDNENCRGGEW 233

Query: 241 FHYACVGLTQETRFKGKWYCPTCRLLPQCQ 270
           FHY+CVGLTQETRFKGKWYCPTCRLLPQCQ
Sbjct: 234 FHYSCVGLTQETRFKGKWYCPTCRLLPQCQ 263


>Medtr1g046460.1 | PHD finger-like protein | HC |
           chr1:17511838-17507067 | 20130731
          Length = 247

 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 124/257 (48%), Gaps = 24/257 (9%)

Query: 9   YVDDYLEYANTLPAELQRLLNTVRELDERSQSMINQTRQQTKYCMGFSSHGSRKGXXXXX 68
           +++++    ++LP  L +    +R+LD+  Q    Q  Q+ +  +     G R G     
Sbjct: 3   FLEEFQANLDSLPNILHKKYALLRDLDKSLQDNQRQNEQRCEQEIEDIRRGVRSGNIAP- 61

Query: 69  XXXXXXXEDDDAAIEKMRKDIETYQDNALSLCTEKVLLARQAYELIDSHVKRLDEDLNNF 128
                     D ++ +   +    Q +++ +  EKV LA QAY+L+D+H+++LD+ L  F
Sbjct: 62  ----------DTSVIRFSDEALDEQKHSIRIADEKVALAVQAYDLVDTHIQQLDQYLKKF 111

Query: 129 AEDLKQEGKIA--QDEPAILPPLPIVPKPEKRRQVVYGTPQSKXXXXXXXXXXXXXXXXF 186
            E+L++E + A     P   P        E  R     T Q+                  
Sbjct: 112 DEELRRERENAAITGAPTSSPDGNTKSGKEGGRGGRKKTRQAASVQTATAAAMAAATEAL 171

Query: 187 ELMPPPGSHKKDYVIPMDVDQPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEWFHYACV 246
                P          MD+D P+DPNEPTYC C+QVS+G+M+ACDN +C+  EWFH+ CV
Sbjct: 172 ATSANPTG--------MDLDLPVDPNEPTYCFCNQVSYGEMVACDNPDCK-IEWFHFGCV 222

Query: 247 GLTQETRFKGKWYCPTC 263
           GL ++   KGKWYC +C
Sbjct: 223 GLKEQP--KGKWYCSSC 237