Miyakogusa Predicted Gene

Lj1g3v3974960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3974960.1 CUFF.31618.1
         (286 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g105630.5 | programmed cell death protein | HC | chr7:4284...   382   e-106
Medtr7g105630.4 | programmed cell death protein | HC | chr7:4284...   382   e-106
Medtr7g105630.1 | programmed cell death protein | HC | chr7:4284...   381   e-106
Medtr7g105630.3 | programmed cell death protein | HC | chr7:4284...   381   e-106
Medtr7g105630.2 | programmed cell death protein | HC | chr7:4284...   381   e-106

>Medtr7g105630.5 | programmed cell death protein | HC |
           chr7:42841463-42836119 | 20130731
          Length = 323

 Score =  382 bits (981), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/239 (76%), Positives = 209/239 (87%), Gaps = 4/239 (1%)

Query: 47  IGLAFEPENQWSLCRQYFPSKAGGIPAWLDPLNIPSGRSSVCDICGDPLLFLLQVYAPIV 106
           +G   +P+N  +L R +FPSKAGG+PAWLDPLNIP+G+SSVCD CGDPL F+LQVYAP+V
Sbjct: 52  LGFLEKPKNPLNLSRHFFPSKAGGLPAWLDPLNIPAGKSSVCDFCGDPLHFVLQVYAPVV 111

Query: 107 EEKCENTFHRMLFVFMCPSMTCLLRDQHEQCKRHPERPSRSVKVFRCQLPRVNPFYSSKH 166
           E+  E+TFHRMLFVFMCPSMTCLLRDQHEQ KR+PERPSRSVKVFRCQLPR+NPFYSS+ 
Sbjct: 112 EK--ESTFHRMLFVFMCPSMTCLLRDQHEQWKRNPERPSRSVKVFRCQLPRINPFYSSEC 169

Query: 167 PTNDGSQKPAGSGAALCDWCGTWKGDKLCSSCKQVRYCSEKHQVMSWRSGHKIACQQMKV 226
           P  DGS KP G+GAALCDWCGTWKGDKLCSSCKQVRYCSEKHQ MSWR+ H IACQQ+KV
Sbjct: 170 PKYDGSDKPTGTGAALCDWCGTWKGDKLCSSCKQVRYCSEKHQTMSWRAEHNIACQQIKV 229

Query: 227 SSPVCGPNRSGTTSLESHKVGSSNFMWPEYEIIIGDESESNRDVSEDNTLHNSLILRNR 285
           S PVCGPN++GTTSLES KVG+ +  WPE+E II D+SE N+DVSEDN L NSLILRNR
Sbjct: 230 SLPVCGPNKNGTTSLESCKVGNKH-TWPEFE-IIEDQSECNKDVSEDNALANSLILRNR 286


>Medtr7g105630.4 | programmed cell death protein | HC |
           chr7:42841463-42836119 | 20130731
          Length = 323

 Score =  382 bits (981), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/239 (76%), Positives = 209/239 (87%), Gaps = 4/239 (1%)

Query: 47  IGLAFEPENQWSLCRQYFPSKAGGIPAWLDPLNIPSGRSSVCDICGDPLLFLLQVYAPIV 106
           +G   +P+N  +L R +FPSKAGG+PAWLDPLNIP+G+SSVCD CGDPL F+LQVYAP+V
Sbjct: 52  LGFLEKPKNPLNLSRHFFPSKAGGLPAWLDPLNIPAGKSSVCDFCGDPLHFVLQVYAPVV 111

Query: 107 EEKCENTFHRMLFVFMCPSMTCLLRDQHEQCKRHPERPSRSVKVFRCQLPRVNPFYSSKH 166
           E+  E+TFHRMLFVFMCPSMTCLLRDQHEQ KR+PERPSRSVKVFRCQLPR+NPFYSS+ 
Sbjct: 112 EK--ESTFHRMLFVFMCPSMTCLLRDQHEQWKRNPERPSRSVKVFRCQLPRINPFYSSEC 169

Query: 167 PTNDGSQKPAGSGAALCDWCGTWKGDKLCSSCKQVRYCSEKHQVMSWRSGHKIACQQMKV 226
           P  DGS KP G+GAALCDWCGTWKGDKLCSSCKQVRYCSEKHQ MSWR+ H IACQQ+KV
Sbjct: 170 PKYDGSDKPTGTGAALCDWCGTWKGDKLCSSCKQVRYCSEKHQTMSWRAEHNIACQQIKV 229

Query: 227 SSPVCGPNRSGTTSLESHKVGSSNFMWPEYEIIIGDESESNRDVSEDNTLHNSLILRNR 285
           S PVCGPN++GTTSLES KVG+ +  WPE+E II D+SE N+DVSEDN L NSLILRNR
Sbjct: 230 SLPVCGPNKNGTTSLESCKVGNKH-TWPEFE-IIEDQSECNKDVSEDNALANSLILRNR 286


>Medtr7g105630.1 | programmed cell death protein | HC |
           chr7:42841436-42836119 | 20130731
          Length = 417

 Score =  381 bits (978), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/239 (76%), Positives = 209/239 (87%), Gaps = 4/239 (1%)

Query: 47  IGLAFEPENQWSLCRQYFPSKAGGIPAWLDPLNIPSGRSSVCDICGDPLLFLLQVYAPIV 106
           +G   +P+N  +L R +FPSKAGG+PAWLDPLNIP+G+SSVCD CGDPL F+LQVYAP+V
Sbjct: 52  LGFLEKPKNPLNLSRHFFPSKAGGLPAWLDPLNIPAGKSSVCDFCGDPLHFVLQVYAPVV 111

Query: 107 EEKCENTFHRMLFVFMCPSMTCLLRDQHEQCKRHPERPSRSVKVFRCQLPRVNPFYSSKH 166
           E+  E+TFHRMLFVFMCPSMTCLLRDQHEQ KR+PERPSRSVKVFRCQLPR+NPFYSS+ 
Sbjct: 112 EK--ESTFHRMLFVFMCPSMTCLLRDQHEQWKRNPERPSRSVKVFRCQLPRINPFYSSEC 169

Query: 167 PTNDGSQKPAGSGAALCDWCGTWKGDKLCSSCKQVRYCSEKHQVMSWRSGHKIACQQMKV 226
           P  DGS KP G+GAALCDWCGTWKGDKLCSSCKQVRYCSEKHQ MSWR+ H IACQQ+KV
Sbjct: 170 PKYDGSDKPTGTGAALCDWCGTWKGDKLCSSCKQVRYCSEKHQTMSWRAEHNIACQQIKV 229

Query: 227 SSPVCGPNRSGTTSLESHKVGSSNFMWPEYEIIIGDESESNRDVSEDNTLHNSLILRNR 285
           S PVCGPN++GTTSLES KVG+ +  WPE+E II D+SE N+DVSEDN L NSLILRNR
Sbjct: 230 SLPVCGPNKNGTTSLESCKVGNKH-TWPEFE-IIEDQSECNKDVSEDNALANSLILRNR 286


>Medtr7g105630.3 | programmed cell death protein | HC |
           chr7:42841463-42836108 | 20130731
          Length = 417

 Score =  381 bits (978), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/239 (76%), Positives = 209/239 (87%), Gaps = 4/239 (1%)

Query: 47  IGLAFEPENQWSLCRQYFPSKAGGIPAWLDPLNIPSGRSSVCDICGDPLLFLLQVYAPIV 106
           +G   +P+N  +L R +FPSKAGG+PAWLDPLNIP+G+SSVCD CGDPL F+LQVYAP+V
Sbjct: 52  LGFLEKPKNPLNLSRHFFPSKAGGLPAWLDPLNIPAGKSSVCDFCGDPLHFVLQVYAPVV 111

Query: 107 EEKCENTFHRMLFVFMCPSMTCLLRDQHEQCKRHPERPSRSVKVFRCQLPRVNPFYSSKH 166
           E+  E+TFHRMLFVFMCPSMTCLLRDQHEQ KR+PERPSRSVKVFRCQLPR+NPFYSS+ 
Sbjct: 112 EK--ESTFHRMLFVFMCPSMTCLLRDQHEQWKRNPERPSRSVKVFRCQLPRINPFYSSEC 169

Query: 167 PTNDGSQKPAGSGAALCDWCGTWKGDKLCSSCKQVRYCSEKHQVMSWRSGHKIACQQMKV 226
           P  DGS KP G+GAALCDWCGTWKGDKLCSSCKQVRYCSEKHQ MSWR+ H IACQQ+KV
Sbjct: 170 PKYDGSDKPTGTGAALCDWCGTWKGDKLCSSCKQVRYCSEKHQTMSWRAEHNIACQQIKV 229

Query: 227 SSPVCGPNRSGTTSLESHKVGSSNFMWPEYEIIIGDESESNRDVSEDNTLHNSLILRNR 285
           S PVCGPN++GTTSLES KVG+ +  WPE+E II D+SE N+DVSEDN L NSLILRNR
Sbjct: 230 SLPVCGPNKNGTTSLESCKVGNKH-TWPEFE-IIEDQSECNKDVSEDNALANSLILRNR 286


>Medtr7g105630.2 | programmed cell death protein | HC |
           chr7:42841463-42836119 | 20130731
          Length = 417

 Score =  381 bits (978), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/239 (76%), Positives = 209/239 (87%), Gaps = 4/239 (1%)

Query: 47  IGLAFEPENQWSLCRQYFPSKAGGIPAWLDPLNIPSGRSSVCDICGDPLLFLLQVYAPIV 106
           +G   +P+N  +L R +FPSKAGG+PAWLDPLNIP+G+SSVCD CGDPL F+LQVYAP+V
Sbjct: 52  LGFLEKPKNPLNLSRHFFPSKAGGLPAWLDPLNIPAGKSSVCDFCGDPLHFVLQVYAPVV 111

Query: 107 EEKCENTFHRMLFVFMCPSMTCLLRDQHEQCKRHPERPSRSVKVFRCQLPRVNPFYSSKH 166
           E+  E+TFHRMLFVFMCPSMTCLLRDQHEQ KR+PERPSRSVKVFRCQLPR+NPFYSS+ 
Sbjct: 112 EK--ESTFHRMLFVFMCPSMTCLLRDQHEQWKRNPERPSRSVKVFRCQLPRINPFYSSEC 169

Query: 167 PTNDGSQKPAGSGAALCDWCGTWKGDKLCSSCKQVRYCSEKHQVMSWRSGHKIACQQMKV 226
           P  DGS KP G+GAALCDWCGTWKGDKLCSSCKQVRYCSEKHQ MSWR+ H IACQQ+KV
Sbjct: 170 PKYDGSDKPTGTGAALCDWCGTWKGDKLCSSCKQVRYCSEKHQTMSWRAEHNIACQQIKV 229

Query: 227 SSPVCGPNRSGTTSLESHKVGSSNFMWPEYEIIIGDESESNRDVSEDNTLHNSLILRNR 285
           S PVCGPN++GTTSLES KVG+ +  WPE+E II D+SE N+DVSEDN L NSLILRNR
Sbjct: 230 SLPVCGPNKNGTTSLESCKVGNKH-TWPEFE-IIEDQSECNKDVSEDNALANSLILRNR 286