Miyakogusa Predicted Gene

Lj1g3v3961390.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3961390.2 tr|G7JG99|G7JG99_MEDTR Anaphase-promoting complex
subunit OS=Medicago truncatula GN=MTR_4g082150 PE=,93.36,0,E3
UBIQUITIN LIGASE APC2,NULL; CULLIN,NULL; Cullin,Cullin, N-terminal; no
description,NULL; seg,NULL,CUFF.31583.2
         (227 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g082150.2 | anaphase promoting complex subunit 2 | HC | ch...   408   e-114
Medtr4g082150.3 | anaphase promoting complex subunit 2 | HC | ch...   408   e-114
Medtr4g082150.1 | anaphase promoting complex subunit 2 | HC | ch...   408   e-114
Medtr4g082150.4 | anaphase promoting complex subunit 2 | HC | ch...   407   e-114
Medtr4g082265.2 | anaphase promoting complex subunit 2 | HC | ch...   402   e-112
Medtr4g082265.1 | anaphase promoting complex subunit 2 | HC | ch...   402   e-112
Medtr7g021880.1 | anaphase promoting complex subunit 2 | HC | ch...   399   e-112
Medtr7g022050.1 | tyrosine kinase family protein | LC | chr7:704...   115   3e-26
Medtr0073s0020.1 | leucine-rich receptor-like kinase family prot...    86   3e-17
Medtr4g119413.1 | cullin 3B | HC | chr4:49479364-49470936 | 2013...    57   1e-08
Medtr4g119413.2 | cullin 3B | HC | chr4:49478916-49471101 | 2013...    57   2e-08
Medtr2g437390.1 | cullin 3B | HC | chr2:14686877-14672632 | 2013...    56   4e-08
Medtr7g108340.1 | cullin 3B | HC | chr7:44103461-44096379 | 2013...    52   6e-07

>Medtr4g082150.2 | anaphase promoting complex subunit 2 | HC |
           chr4:31901860-31893593 | 20130731
          Length = 884

 Score =  408 bits (1048), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 194/208 (93%), Positives = 204/208 (98%)

Query: 20  LLEELNRDEEIQENVGVDDDFNTDDREAWINASRWQPDPVEADPLKGSRNQRKVDILGMI 79
           LLEELNRDEEIQEN G+DDDFNTDDR+AWINA+RWQPDPVEADPLKGSRNQRKVDILGMI
Sbjct: 494 LLEELNRDEEIQENFGIDDDFNTDDRQAWINATRWQPDPVEADPLKGSRNQRKVDILGMI 553

Query: 80  VGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI 139
           VGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI
Sbjct: 554 VGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI 613

Query: 140 GSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDKL 199
           GSKR+N+NIKATISQP QT+VEVEDNAISMD +AATIISSNFWPPIQ EPLNLPEPVDKL
Sbjct: 614 GSKRVNTNIKATISQPPQTSVEVEDNAISMDKVAATIISSNFWPPIQDEPLNLPEPVDKL 673

Query: 200 LSDYAKRFNEIKTPRKLQWKKSLGTVKV 227
           LSDYAKRF+E+KTPRKLQWKKSLGTVK+
Sbjct: 674 LSDYAKRFSEVKTPRKLQWKKSLGTVKL 701


>Medtr4g082150.3 | anaphase promoting complex subunit 2 | HC |
           chr4:31901860-31894946 | 20130731
          Length = 884

 Score =  408 bits (1048), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 194/208 (93%), Positives = 204/208 (98%)

Query: 20  LLEELNRDEEIQENVGVDDDFNTDDREAWINASRWQPDPVEADPLKGSRNQRKVDILGMI 79
           LLEELNRDEEIQEN G+DDDFNTDDR+AWINA+RWQPDPVEADPLKGSRNQRKVDILGMI
Sbjct: 494 LLEELNRDEEIQENFGIDDDFNTDDRQAWINATRWQPDPVEADPLKGSRNQRKVDILGMI 553

Query: 80  VGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI 139
           VGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI
Sbjct: 554 VGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI 613

Query: 140 GSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDKL 199
           GSKR+N+NIKATISQP QT+VEVEDNAISMD +AATIISSNFWPPIQ EPLNLPEPVDKL
Sbjct: 614 GSKRVNTNIKATISQPPQTSVEVEDNAISMDKVAATIISSNFWPPIQDEPLNLPEPVDKL 673

Query: 200 LSDYAKRFNEIKTPRKLQWKKSLGTVKV 227
           LSDYAKRF+E+KTPRKLQWKKSLGTVK+
Sbjct: 674 LSDYAKRFSEVKTPRKLQWKKSLGTVKL 701


>Medtr4g082150.1 | anaphase promoting complex subunit 2 | HC |
           chr4:31901860-31893593 | 20130731
          Length = 884

 Score =  408 bits (1048), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 194/208 (93%), Positives = 204/208 (98%)

Query: 20  LLEELNRDEEIQENVGVDDDFNTDDREAWINASRWQPDPVEADPLKGSRNQRKVDILGMI 79
           LLEELNRDEEIQEN G+DDDFNTDDR+AWINA+RWQPDPVEADPLKGSRNQRKVDILGMI
Sbjct: 494 LLEELNRDEEIQENFGIDDDFNTDDRQAWINATRWQPDPVEADPLKGSRNQRKVDILGMI 553

Query: 80  VGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI 139
           VGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI
Sbjct: 554 VGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI 613

Query: 140 GSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDKL 199
           GSKR+N+NIKATISQP QT+VEVEDNAISMD +AATIISSNFWPPIQ EPLNLPEPVDKL
Sbjct: 614 GSKRVNTNIKATISQPPQTSVEVEDNAISMDKVAATIISSNFWPPIQDEPLNLPEPVDKL 673

Query: 200 LSDYAKRFNEIKTPRKLQWKKSLGTVKV 227
           LSDYAKRF+E+KTPRKLQWKKSLGTVK+
Sbjct: 674 LSDYAKRFSEVKTPRKLQWKKSLGTVKL 701


>Medtr4g082150.4 | anaphase promoting complex subunit 2 | HC |
           chr4:31901860-31893593 | 20130731
          Length = 708

 Score =  407 bits (1046), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 194/208 (93%), Positives = 204/208 (98%)

Query: 20  LLEELNRDEEIQENVGVDDDFNTDDREAWINASRWQPDPVEADPLKGSRNQRKVDILGMI 79
           LLEELNRDEEIQEN G+DDDFNTDDR+AWINA+RWQPDPVEADPLKGSRNQRKVDILGMI
Sbjct: 318 LLEELNRDEEIQENFGIDDDFNTDDRQAWINATRWQPDPVEADPLKGSRNQRKVDILGMI 377

Query: 80  VGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI 139
           VGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI
Sbjct: 378 VGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI 437

Query: 140 GSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDKL 199
           GSKR+N+NIKATISQP QT+VEVEDNAISMD +AATIISSNFWPPIQ EPLNLPEPVDKL
Sbjct: 438 GSKRVNTNIKATISQPPQTSVEVEDNAISMDKVAATIISSNFWPPIQDEPLNLPEPVDKL 497

Query: 200 LSDYAKRFNEIKTPRKLQWKKSLGTVKV 227
           LSDYAKRF+E+KTPRKLQWKKSLGTVK+
Sbjct: 498 LSDYAKRFSEVKTPRKLQWKKSLGTVKL 525


>Medtr4g082265.2 | anaphase promoting complex subunit 2 | HC |
           chr4:31965674-31958082 | 20130731
          Length = 884

 Score =  402 bits (1034), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 192/208 (92%), Positives = 203/208 (97%)

Query: 20  LLEELNRDEEIQENVGVDDDFNTDDREAWINASRWQPDPVEADPLKGSRNQRKVDILGMI 79
           LLEELNRDEEIQEN G+DDDFNTDDR+AWINA+RWQPDPVEADPLKGSRNQRKVDILGMI
Sbjct: 494 LLEELNRDEEIQENFGIDDDFNTDDRQAWINATRWQPDPVEADPLKGSRNQRKVDILGMI 553

Query: 80  VGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI 139
           VGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI
Sbjct: 554 VGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI 613

Query: 140 GSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDKL 199
           GSKR+++NIKATISQ  QT+VEVEDNAISMD +AATIISSNFWPPIQ EPLNLPEPVDKL
Sbjct: 614 GSKRVDTNIKATISQLPQTSVEVEDNAISMDKVAATIISSNFWPPIQDEPLNLPEPVDKL 673

Query: 200 LSDYAKRFNEIKTPRKLQWKKSLGTVKV 227
           LSDYAKRF+E+KTPRKLQWKKSLGTVK+
Sbjct: 674 LSDYAKRFSEVKTPRKLQWKKSLGTVKL 701


>Medtr4g082265.1 | anaphase promoting complex subunit 2 | HC |
           chr4:31965674-31958082 | 20130731
          Length = 884

 Score =  402 bits (1034), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 192/208 (92%), Positives = 203/208 (97%)

Query: 20  LLEELNRDEEIQENVGVDDDFNTDDREAWINASRWQPDPVEADPLKGSRNQRKVDILGMI 79
           LLEELNRDEEIQEN G+DDDFNTDDR+AWINA+RWQPDPVEADPLKGSRNQRKVDILGMI
Sbjct: 494 LLEELNRDEEIQENFGIDDDFNTDDRQAWINATRWQPDPVEADPLKGSRNQRKVDILGMI 553

Query: 80  VGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI 139
           VGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI
Sbjct: 554 VGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI 613

Query: 140 GSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDKL 199
           GSKR+++NIKATISQ  QT+VEVEDNAISMD +AATIISSNFWPPIQ EPLNLPEPVDKL
Sbjct: 614 GSKRVDTNIKATISQLPQTSVEVEDNAISMDKVAATIISSNFWPPIQDEPLNLPEPVDKL 673

Query: 200 LSDYAKRFNEIKTPRKLQWKKSLGTVKV 227
           LSDYAKRF+E+KTPRKLQWKKSLGTVK+
Sbjct: 674 LSDYAKRFSEVKTPRKLQWKKSLGTVKL 701


>Medtr7g021880.1 | anaphase promoting complex subunit 2 | HC |
           chr7:6983764-6990007 | 20130731
          Length = 911

 Score =  399 bits (1026), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 190/208 (91%), Positives = 202/208 (97%)

Query: 20  LLEELNRDEEIQENVGVDDDFNTDDREAWINASRWQPDPVEADPLKGSRNQRKVDILGMI 79
           LLEELNRDEEIQEN G+DDDFNTDDR+AWINA+RWQPDPVEADP KGSRNQRKVD+LGMI
Sbjct: 522 LLEELNRDEEIQENFGIDDDFNTDDRQAWINATRWQPDPVEADPSKGSRNQRKVDVLGMI 581

Query: 80  VGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI 139
           VGIIGSKD LVHEY+TMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI
Sbjct: 582 VGIIGSKDHLVHEYQTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI 641

Query: 140 GSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDKL 199
           GSKR+N+NIKATISQP +T+VEVEDNAISMD IA+TIISSNFWPPIQ EPLNLPEPVD+L
Sbjct: 642 GSKRVNTNIKATISQPPRTSVEVEDNAISMDKIASTIISSNFWPPIQDEPLNLPEPVDQL 701

Query: 200 LSDYAKRFNEIKTPRKLQWKKSLGTVKV 227
           LSDYAKRFNEIKTPRKLQWKKSLGTVK+
Sbjct: 702 LSDYAKRFNEIKTPRKLQWKKSLGTVKL 729


>Medtr7g022050.1 | tyrosine kinase family protein | LC |
           chr7:7044527-7047112 | 20130731
          Length = 641

 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/113 (61%), Positives = 86/113 (76%), Gaps = 5/113 (4%)

Query: 20  LLEELNRDEEIQENVGVDDDFNTDDREAWINASRWQPDPVEADPLKGSRNQRKVDILGMI 79
           LL+ELNRDEEIQEN G+DDDF+TDDR+AWINA+RWQPDPVEADP KGSR+QRKVD+LGMI
Sbjct: 215 LLQELNRDEEIQENFGIDDDFDTDDRQAWINATRWQPDPVEADPSKGSRHQRKVDVLGMI 274

Query: 80  VGIIGSKDQLVHEYRTMLAEKLLNKS---DYDIDSEIRTLELLKIHFGESSLQ 129
           VGIIGS D L+      +A+   +KS      I S + + E L++ +G  SL+
Sbjct: 275 VGIIGSTDHLLQ--MVCIADPPYDKSLQQPQSILSSLVSEEKLELRYGLYSLK 325


>Medtr0073s0020.1 | leucine-rich receptor-like kinase family protein
           | LC | scaffold0073:13360-14754 | 20130731
          Length = 301

 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 52/54 (96%)

Query: 20  LLEELNRDEEIQENVGVDDDFNTDDREAWINASRWQPDPVEADPLKGSRNQRKV 73
           LL+ELNRDEEIQEN G+DDDF+TDDR+AWINA+RWQPDPVEADP KGSR+QRK+
Sbjct: 210 LLQELNRDEEIQENFGIDDDFDTDDRQAWINATRWQPDPVEADPSKGSRHQRKM 263


>Medtr4g119413.1 | cullin 3B | HC | chr4:49479364-49470936 |
           20130731
          Length = 744

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 8/149 (5%)

Query: 79  IVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDL 138
           ++  I  KD     YR  LA +LL     + D E   L  LK   G     K E M+ DL
Sbjct: 425 LLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 484

Query: 139 IGSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDK 198
             +K   ++ +  +S     N    D  I   ++  T++++ FWP  +   LNLP  + K
Sbjct: 485 TLAKENQTSFEEYLS-----NTPNADPGI---DLTVTVLTTGFWPSYKSFDLNLPAEMVK 536

Query: 199 LLSDYAKRFNEIKTPRKLQWKKSLGTVKV 227
            +  + + ++     RKL W  SLGT  +
Sbjct: 537 CVEVFKEFYSTKTKHRKLTWIYSLGTCNI 565


>Medtr4g119413.2 | cullin 3B | HC | chr4:49478916-49471101 |
           20130731
          Length = 632

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 8/149 (5%)

Query: 79  IVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDL 138
           ++  I  KD     YR  LA +LL     + D E   L  LK   G     K E M+ DL
Sbjct: 425 LLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 484

Query: 139 IGSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDK 198
             +K   ++ +  +S     N    D  I   ++  T++++ FWP  +   LNLP  + K
Sbjct: 485 TLAKENQTSFEEYLS-----NTPNADPGI---DLTVTVLTTGFWPSYKSFDLNLPAEMVK 536

Query: 199 LLSDYAKRFNEIKTPRKLQWKKSLGTVKV 227
            +  + + ++     RKL W  SLGT  +
Sbjct: 537 CVEVFKEFYSTKTKHRKLTWIYSLGTCNI 565


>Medtr2g437390.1 | cullin 3B | HC | chr2:14686877-14672632 |
           20130731
          Length = 742

 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 18/154 (11%)

Query: 79  IVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDL 138
           ++  I  KD     YR  LA +LL     + D E   L  LK   G     K E M+ DL
Sbjct: 423 LLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 482

Query: 139 IGSKRINSNIKATISQPSQTNVE-VEDNAISMD---NIAATIISSNFWPPIQVEPLNLPE 194
                       T+++ +QT+ E    N  ++D   ++  T++++ FWP  +   LNLP 
Sbjct: 483 ------------TLAKENQTSFEEYLKNNPNVDPGIDLTVTVLTTGFWPSYKSFDLNLPA 530

Query: 195 PVDKLLSDYAKRFNEIKTP-RKLQWKKSLGTVKV 227
            + K +  + K F + KT  RKL W  SLGT  +
Sbjct: 531 EMVKCVEVF-KEFYQTKTKHRKLTWIYSLGTCNI 563


>Medtr7g108340.1 | cullin 3B | HC | chr7:44103461-44096379 |
           20130731
          Length = 735

 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 10/150 (6%)

Query: 79  IVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDL 138
           ++  I  KD     YR  LA +LL     + + E   L  LK   G     K E M+ DL
Sbjct: 416 LLAYISDKDLFAEFYRKKLARRLLFDRSANDEHEKCILTKLKQQCGGQFTSKMEGMVVDL 475

Query: 139 IGSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDK 198
             ++      +  +++ S  +  +        ++  T++++ FWP  +   LNLP  + K
Sbjct: 476 TLARDNQLKFQEYLNENSDVHPGI--------DLTVTVLTTGFWPSYKSFDLNLPSEMVK 527

Query: 199 LLSDYAKRFNEIKTP-RKLQWKKSLGTVKV 227
            +  + K F E KT  RKL W  SLGT  +
Sbjct: 528 CVEVF-KGFYETKTKHRKLTWIYSLGTCNI 556