Miyakogusa Predicted Gene

Lj1g3v3959320.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3959320.1 Non Characterized Hit- tr|D8S593|D8S593_SELML
Putative uncharacterized protein OS=Selaginella
moelle,38.71,0.0003,seg,NULL,CUFF.31722.1
         (246 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g085350.1 | transcription regulator NOT2/NOT3/NOT5 family ...   265   3e-71
Medtr7g085350.2 | transcription regulator NOT2/NOT3/NOT5 family ...   265   3e-71

>Medtr7g085350.1 | transcription regulator NOT2/NOT3/NOT5 family
           protein | HC | chr7:33041291-33054371 | 20130731
          Length = 901

 Score =  265 bits (677), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 165/241 (68%), Positives = 171/241 (70%), Gaps = 7/241 (2%)

Query: 7   ALGSVPSASEITKRNILGADDRLGSSGMVQPLVSPLSNRLILPQVAKANDGM-SADSSTV 65
           ALG VPSASEITKRNILGADDRLGSSGMVQPLVSPLSNRLILPQ+ KANDG  S DSS V
Sbjct: 435 ALGVVPSASEITKRNILGADDRLGSSGMVQPLVSPLSNRLILPQIGKANDGAASVDSSIV 494

Query: 66  NEAAAVSGRVFSPSVVPGMQWRPGSPFQNQNDAGQLRARTEIAPDQREXXXXXXXXXXXX 125
           NEAAAVSGRVFSPSVVPGMQWRPGSPFQNQNDAGQLR RTEIAPDQRE            
Sbjct: 495 NEAAAVSGRVFSPSVVPGMQWRPGSPFQNQNDAGQLRGRTEIAPDQREKFLQKFQQVQQQ 554

Query: 126 GPSTLLNMPSLVGGNHKQFSAQQQNPLLQQFNTXXXXXXXXXXXXXXXXXXXXXXXXXXX 185
           GPSTLLNMPSLVGGNHKQFS+QQQ+PLLQQFN+                           
Sbjct: 555 GPSTLLNMPSLVGGNHKQFSSQQQSPLLQQFNS-QGSSVSSQSSMGLGAQSPSLGGISSV 613

Query: 186 XXXXXXXXHSPSSQQPLIPGVAKDADVGNSKVEEQQQHQNYADESTAESPSSNGIGKNLA 245
                   HSPS Q P   GVAKDAD    K EE QQHQN+ DEST ES SS GIGKNL 
Sbjct: 614 SLQQLNSVHSPSGQHPF-AGVAKDAD----KFEEHQQHQNFPDESTTESTSSTGIGKNLT 668

Query: 246 I 246
           +
Sbjct: 669 V 669


>Medtr7g085350.2 | transcription regulator NOT2/NOT3/NOT5 family
           protein | HC | chr7:33041286-33054371 | 20130731
          Length = 876

 Score =  265 bits (677), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 165/241 (68%), Positives = 171/241 (70%), Gaps = 7/241 (2%)

Query: 7   ALGSVPSASEITKRNILGADDRLGSSGMVQPLVSPLSNRLILPQVAKANDGM-SADSSTV 65
           ALG VPSASEITKRNILGADDRLGSSGMVQPLVSPLSNRLILPQ+ KANDG  S DSS V
Sbjct: 410 ALGVVPSASEITKRNILGADDRLGSSGMVQPLVSPLSNRLILPQIGKANDGAASVDSSIV 469

Query: 66  NEAAAVSGRVFSPSVVPGMQWRPGSPFQNQNDAGQLRARTEIAPDQREXXXXXXXXXXXX 125
           NEAAAVSGRVFSPSVVPGMQWRPGSPFQNQNDAGQLR RTEIAPDQRE            
Sbjct: 470 NEAAAVSGRVFSPSVVPGMQWRPGSPFQNQNDAGQLRGRTEIAPDQREKFLQKFQQVQQQ 529

Query: 126 GPSTLLNMPSLVGGNHKQFSAQQQNPLLQQFNTXXXXXXXXXXXXXXXXXXXXXXXXXXX 185
           GPSTLLNMPSLVGGNHKQFS+QQQ+PLLQQFN+                           
Sbjct: 530 GPSTLLNMPSLVGGNHKQFSSQQQSPLLQQFNS-QGSSVSSQSSMGLGAQSPSLGGISSV 588

Query: 186 XXXXXXXXHSPSSQQPLIPGVAKDADVGNSKVEEQQQHQNYADESTAESPSSNGIGKNLA 245
                   HSPS Q P   GVAKDAD    K EE QQHQN+ DEST ES SS GIGKNL 
Sbjct: 589 SLQQLNSVHSPSGQHPF-AGVAKDAD----KFEEHQQHQNFPDESTTESTSSTGIGKNLT 643

Query: 246 I 246
           +
Sbjct: 644 V 644