Miyakogusa Predicted Gene

Lj1g3v3958310.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3958310.1 Non Characterized Hit- tr|I1JD46|I1JD46_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39505
PE,90.72,0,SUBFAMILY NOT NAMED,NULL; CCR4 NOT-RELATED,NULL;
coiled-coil,NULL; Not3,Not CCR4-Not complex compone,CUFF.31717.1
         (292 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g085350.2 | transcription regulator NOT2/NOT3/NOT5 family ...   462   e-130
Medtr7g085350.1 | transcription regulator NOT2/NOT3/NOT5 family ...   461   e-130

>Medtr7g085350.2 | transcription regulator NOT2/NOT3/NOT5 family
           protein | HC | chr7:33041286-33054371 | 20130731
          Length = 876

 Score =  462 bits (1188), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 230/258 (89%), Positives = 238/258 (92%), Gaps = 2/258 (0%)

Query: 1   MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD 60
           MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
Sbjct: 1   MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD 60

Query: 61  QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK 120
           QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
Sbjct: 61  QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK 120

Query: 121 TDPKEKAKSESREWLNNVVGELESQIDSFEAELEGLSVKKGKNRPPRLTHLETSITRHKA 180
           TDP+EKAKSE+R+WLNNVVGELESQID+FEAELEGL+VKKGKNRP RLTHLETSITRHKA
Sbjct: 121 TDPREKAKSETRDWLNNVVGELESQIDNFEAELEGLTVKKGKNRPSRLTHLETSITRHKA 180

Query: 181 HIKKCEFILRLLDNDELSPEEVNDVKDFLDDYVERNQXXXXXXXXXXXLYSSLPLDRVET 240
           HIKKCE +LRLLDNDELSPEEVNDVKDFLDDYVERNQ           LYSSLPLD+V+T
Sbjct: 181 HIKKCELVLRLLDNDELSPEEVNDVKDFLDDYVERNQDDFDEFDDVDELYSSLPLDKVDT 240

Query: 241 LEDLVMIPP--GPVKVAP 256
           LEDLV IP      KVAP
Sbjct: 241 LEDLVTIPTSVAVAKVAP 258


>Medtr7g085350.1 | transcription regulator NOT2/NOT3/NOT5 family
           protein | HC | chr7:33041291-33054371 | 20130731
          Length = 901

 Score =  461 bits (1186), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 226/248 (91%), Positives = 234/248 (94%)

Query: 1   MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD 60
           MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
Sbjct: 1   MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD 60

Query: 61  QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK 120
           QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
Sbjct: 61  QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK 120

Query: 121 TDPKEKAKSESREWLNNVVGELESQIDSFEAELEGLSVKKGKNRPPRLTHLETSITRHKA 180
           TDP+EKAKSE+R+WLNNVVGELESQID+FEAELEGL+VKKGKNRP RLTHLETSITRHKA
Sbjct: 121 TDPREKAKSETRDWLNNVVGELESQIDNFEAELEGLTVKKGKNRPSRLTHLETSITRHKA 180

Query: 181 HIKKCEFILRLLDNDELSPEEVNDVKDFLDDYVERNQXXXXXXXXXXXLYSSLPLDRVET 240
           HIKKCE +LRLLDNDELSPEEVNDVKDFLDDYVERNQ           LYSSLPLD+V+T
Sbjct: 181 HIKKCELVLRLLDNDELSPEEVNDVKDFLDDYVERNQDDFDEFDDVDELYSSLPLDKVDT 240

Query: 241 LEDLVMIP 248
           LEDLV IP
Sbjct: 241 LEDLVTIP 248