Miyakogusa Predicted Gene

Lj1g3v3948270.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3948270.1 CUFF.31702.1
         (151 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g084270.1 | hypothetical protein | HC | chr3:38045944-3804...    78   3e-15
Medtr3g105890.3 | transmembrane protein, putative | HC | chr3:48...    76   1e-14
Medtr3g105890.1 | transmembrane protein, putative | HC | chr3:48...    76   1e-14
Medtr3g105890.2 | transmembrane protein, putative | HC | chr3:48...    76   1e-14
Medtr3g108610.1 | hypothetical protein | LC | chr3:50152169-5015...    75   2e-14
Medtr8g461450.1 | hypothetical protein | HC | chr8:21634914-2163...    69   2e-12
Medtr2g101670.1 | hypothetical protein | LC | chr2:43741384-4374...    62   2e-10
Medtr6g070990.1 | hypothetical protein | LC | chr6:26217723-2621...    57   7e-09

>Medtr3g084270.1 | hypothetical protein | HC |
           chr3:38045944-38044376 | 20130731
          Length = 80

 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/40 (87%), Positives = 35/40 (87%)

Query: 62  KHLAVEFVPSGISDKIGTIQRRLAWPLRKDDTHKSRNGPN 101
           K LA   VPSG SDKIGTIQRRLAWPLRKDDTHKSRNGPN
Sbjct: 16  KELAALLVPSGTSDKIGTIQRRLAWPLRKDDTHKSRNGPN 55


>Medtr3g105890.3 | transmembrane protein, putative | HC |
           chr3:48836748-48839897 | 20130731
          Length = 113

 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 33/44 (75%), Positives = 34/44 (77%)

Query: 61  KKHLAVEFVPSGISDKIGTIQRRLAWPLRKDDTHKSRNGPNIFV 104
           +       VPSG SDKIGTIQRRLAWPLRKDDTHKSRNGPN F 
Sbjct: 19  RSERTAGLVPSGTSDKIGTIQRRLAWPLRKDDTHKSRNGPNFFC 62


>Medtr3g105890.1 | transmembrane protein, putative | HC |
           chr3:48836748-48839897 | 20130731
          Length = 113

 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 33/44 (75%), Positives = 34/44 (77%)

Query: 61  KKHLAVEFVPSGISDKIGTIQRRLAWPLRKDDTHKSRNGPNIFV 104
           +       VPSG SDKIGTIQRRLAWPLRKDDTHKSRNGPN F 
Sbjct: 19  RSERTAGLVPSGTSDKIGTIQRRLAWPLRKDDTHKSRNGPNFFC 62


>Medtr3g105890.2 | transmembrane protein, putative | HC |
           chr3:48836748-48839897 | 20130731
          Length = 88

 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 33/44 (75%), Positives = 34/44 (77%)

Query: 61  KKHLAVEFVPSGISDKIGTIQRRLAWPLRKDDTHKSRNGPNIFV 104
           +       VPSG SDKIGTIQRRLAWPLRKDDTHKSRNGPN F 
Sbjct: 19  RSERTAGLVPSGTSDKIGTIQRRLAWPLRKDDTHKSRNGPNFFC 62


>Medtr3g108610.1 | hypothetical protein | LC |
          chr3:50152169-50154150 | 20130731
          Length = 112

 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/52 (71%), Positives = 39/52 (75%)

Query: 48 PTSVKPAIIQVFIKKHLAVEFVPSGISDKIGTIQRRLAWPLRKDDTHKSRNG 99
          PTS K   I VFI ++     VP G SDKIGTIQRRLAWPLRKDDTHKSRNG
Sbjct: 25 PTSTKYVKISVFILRYNTSLLVPLGTSDKIGTIQRRLAWPLRKDDTHKSRNG 76


>Medtr8g461450.1 | hypothetical protein | HC |
           chr8:21634914-21634222 | 20130731
          Length = 69

 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/43 (76%), Positives = 34/43 (79%), Gaps = 1/43 (2%)

Query: 68  FVPSGISDKIGTIQRRLAWPLRKDDTHKSRNGPNIFVNPFFFP 110
            VPSG SDKIGTIQRRLAWPLRKDDTHKSRNG  + VN    P
Sbjct: 4   LVPSGTSDKIGTIQRRLAWPLRKDDTHKSRNG-QLHVNRTGSP 45


>Medtr2g101670.1 | hypothetical protein | LC |
           chr2:43741384-43741593 | 20130731
          Length = 69

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/35 (77%), Positives = 29/35 (82%)

Query: 68  FVPSGISDKIGTIQRRLAWPLRKDDTHKSRNGPNI 102
           +VPSG SDKI TI RRL W L KDDTH+SRNGPNI
Sbjct: 20  YVPSGTSDKIKTIHRRLTWLLHKDDTHQSRNGPNI 54


>Medtr6g070990.1 | hypothetical protein | LC |
          chr6:26217723-26216302 | 20130731
          Length = 94

 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 24/28 (85%), Positives = 25/28 (89%)

Query: 68 FVPSGISDKIGTIQRRLAWPLRKDDTHK 95
           VPSG SDKIGTIQRRLAWPLRKDDT +
Sbjct: 37 LVPSGTSDKIGTIQRRLAWPLRKDDTDQ 64