Miyakogusa Predicted Gene
- Lj1g3v3944940.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3944940.1 tr|E3NYP1|E3NYP1_SOYBN Flowering locus T-like
protein 1 OS=Glycine max GN=FTL1 PE=2
SV=1,88,0,PBP,Phosphatidylethanolamine-binding protein PEBP;
PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN,NULL; PE,CUFF.31547.1
(174 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g084970.1 | flowering locus protein T | HC | chr7:32843544... 310 6e-85
Medtr7g085020.1 | flowering locus protein T | HC | chr7:32863573... 289 1e-78
Medtr6g033040.1 | flowering locus protein T | HC | chr6:10371673... 284 3e-77
Medtr7g006690.1 | flowering locus protein T | HC | chr7:817865-8... 258 3e-69
Medtr7g006630.1 | flowering locus protein T | HC | chr7:776568-7... 257 4e-69
Medtr7g085040.1 | flowering locus protein T | HC | chr7:32874924... 222 1e-58
Medtr0020s0120.1 | terminal flower 1 | HC | scaffold0020:150836-... 221 3e-58
Medtr7g104460.1 | terminal flower 1 | HC | chr7:42325767-4232423... 207 4e-54
Medtr0020s0120.2 | terminal flower 1 | HC | scaffold0020:150836-... 207 5e-54
Medtr2g086270.1 | terminal flower 1 | HC | chr2:36279047-3627717... 198 2e-51
Medtr1g060190.1 | terminal flower 1 | HC | chr1:26206613-2620308... 184 4e-47
Medtr8g106840.1 | mother of FT and TFL1-like protein | HC | chr8... 176 1e-44
Medtr5g078320.1 | phosphatidylethanolamine-binding protein | HC ... 56 2e-08
>Medtr7g084970.1 | flowering locus protein T | HC |
chr7:32843544-32845635 | 20130731
Length = 176
Score = 310 bits (793), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 145/172 (84%), Positives = 159/172 (92%)
Query: 3 NSRNPLVVGRVIGDVLDPFESSIPLRVTYGSRDVTNGCEFKPSQVPNQPRVSVGGDDLRT 62
+SRNPL VGRVIGDV+D FE+SIPLRVTYG+RDV NGCE KPSQ+ NQPRVSVGG+DLR
Sbjct: 4 SSRNPLAVGRVIGDVIDSFENSIPLRVTYGNRDVNNGCELKPSQIGNQPRVSVGGNDLRN 63
Query: 63 LYTLVLVDPDAPSPSNPSFREYLHWLVTDIPATTGASFGNEIVAYQSPRPTMGIHRFVFV 122
LYTLV+VDPD+PSPSNP+F+EYLHWLVTDIP TT +FGNE+V Y+ PRPT GIHRFVFV
Sbjct: 64 LYTLVMVDPDSPSPSNPTFKEYLHWLVTDIPGTTEVTFGNEVVNYERPRPTSGIHRFVFV 123
Query: 123 LFRQQCRQRVYAPGWRQNFNTREFAELYNLGLPVAAVFFNCQRETGSGGRTF 174
LFRQQCRQRVYAPGWRQNFNTREFAELYNLG PVAAVFFNCQRE+GSGGRTF
Sbjct: 124 LFRQQCRQRVYAPGWRQNFNTREFAELYNLGSPVAAVFFNCQRESGSGGRTF 175
>Medtr7g085020.1 | flowering locus protein T | HC |
chr7:32863573-32865793 | 20130731
Length = 177
Score = 289 bits (739), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 138/169 (81%), Positives = 148/169 (87%)
Query: 6 NPLVVGRVIGDVLDPFESSIPLRVTYGSRDVTNGCEFKPSQVPNQPRVSVGGDDLRTLYT 65
NPL VGRVIGDVLDPFES+IPL VTYG+R VTNG E KPSQV NQP+V +G +D LYT
Sbjct: 8 NPLAVGRVIGDVLDPFESTIPLLVTYGNRTVTNGGELKPSQVANQPQVIIGVNDPTALYT 67
Query: 66 LVLVDPDAPSPSNPSFREYLHWLVTDIPATTGASFGNEIVAYQSPRPTMGIHRFVFVLFR 125
LVLVDPDAPSPS PSFREYLHW+VTDIPAT ASFGNE+V+Y+ PRP +GIHRFVFVL
Sbjct: 68 LVLVDPDAPSPSYPSFREYLHWMVTDIPATNAASFGNEVVSYEKPRPNLGIHRFVFVLLH 127
Query: 126 QQCRQRVYAPGWRQNFNTREFAELYNLGLPVAAVFFNCQRETGSGGRTF 174
QQCRQRVYAPGWRQNFNTREF E YNLG PVAAVFFNCQRETGSGGRTF
Sbjct: 128 QQCRQRVYAPGWRQNFNTREFIEFYNLGSPVAAVFFNCQRETGSGGRTF 176
>Medtr6g033040.1 | flowering locus protein T | HC |
chr6:10371673-10369989 | 20130731
Length = 175
Score = 284 bits (726), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 133/170 (78%), Positives = 152/170 (89%)
Query: 3 NSRNPLVVGRVIGDVLDPFESSIPLRVTYGSRDVTNGCEFKPSQVPNQPRVSVGGDDLRT 62
+SR+PLVVG VIGDVL PF+SSIP+RV+Y +++ NGCEFKPSQV NQPRVSVGGDDLR
Sbjct: 4 SSRDPLVVGGVIGDVLVPFQSSIPIRVSYNGKELNNGCEFKPSQVVNQPRVSVGGDDLRN 63
Query: 63 LYTLVLVDPDAPSPSNPSFREYLHWLVTDIPATTGASFGNEIVAYQSPRPTMGIHRFVFV 122
YTL++VDPDAPSPSNP+ REYLHWLVTDIPATTG +FG+E+V Y+SPRP+MGIHR VFV
Sbjct: 64 FYTLIMVDPDAPSPSNPNLREYLHWLVTDIPATTGPTFGHEVVPYESPRPSMGIHRIVFV 123
Query: 123 LFRQQCRQRVYAPGWRQNFNTREFAELYNLGLPVAAVFFNCQRETGSGGR 172
+FRQ R+ VYAPGWRQNFNTREFAELYNLGLPVAA +FN QRE GSGGR
Sbjct: 124 IFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAAYFNIQREHGSGGR 173
>Medtr7g006690.1 | flowering locus protein T | HC |
chr7:817865-814443 | 20130731
Length = 178
Score = 258 bits (658), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 122/170 (71%), Positives = 143/170 (84%), Gaps = 1/170 (0%)
Query: 4 SRNPLVVGRVIGDVLDPFESSIPLRVTY-GSRDVTNGCEFKPSQVPNQPRVSVGGDDLRT 62
S NPLVVG VIG+VLDPF SS+ LRV Y +++V N E KPSQ+ N PRV VGG+DLRT
Sbjct: 5 STNPLVVGGVIGEVLDPFTSSVSLRVVYDNNKEVINSGELKPSQIINSPRVQVGGNDLRT 64
Query: 63 LYTLVLVDPDAPSPSNPSFREYLHWLVTDIPATTGASFGNEIVAYQSPRPTMGIHRFVFV 122
LYTLV+V+PDAPSPS+P+ REYL+W+VT+IPATTG +FG EIV+Y+SPRP GIHR +FV
Sbjct: 65 LYTLVMVNPDAPSPSDPNMREYLYWMVTNIPATTGTTFGQEIVSYESPRPASGIHRVIFV 124
Query: 123 LFRQQCRQRVYAPGWRQNFNTREFAELYNLGLPVAAVFFNCQRETGSGGR 172
LFRQ CR V APGWRQNF TR+FAE YNLGLPVAA++FNCQRE GSGGR
Sbjct: 125 LFRQPCRHTVLAPGWRQNFITRDFAEFYNLGLPVAALYFNCQRENGSGGR 174
>Medtr7g006630.1 | flowering locus protein T | HC |
chr7:776568-774510 | 20130731
Length = 173
Score = 257 bits (656), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 122/168 (72%), Positives = 142/168 (84%), Gaps = 1/168 (0%)
Query: 6 NPLVVGRVIGDVLDPFESSIPLRVTY-GSRDVTNGCEFKPSQVPNQPRVSVGGDDLRTLY 64
NPLVV VIGDVLDPF +S+ LRV Y +++V+N E KPSQ+ N PRV VGG+DLRTLY
Sbjct: 2 NPLVVCGVIGDVLDPFTNSVSLRVVYENNKEVSNSGELKPSQIVNPPRVQVGGNDLRTLY 61
Query: 65 TLVLVDPDAPSPSNPSFREYLHWLVTDIPATTGASFGNEIVAYQSPRPTMGIHRFVFVLF 124
TLV+VDPD PSPSNP+ REYLHW+VT+IPATTG +FG EIV+Y++PRPT GIHR +FVLF
Sbjct: 62 TLVMVDPDGPSPSNPNMREYLHWMVTNIPATTGTTFGQEIVSYENPRPTSGIHRVIFVLF 121
Query: 125 RQQCRQRVYAPGWRQNFNTREFAELYNLGLPVAAVFFNCQRETGSGGR 172
RQ CR V APGWRQNF TR+FAE YNLGLPVAA++FNCQRE GSGGR
Sbjct: 122 RQPCRHTVLAPGWRQNFITRDFAEFYNLGLPVAALYFNCQRENGSGGR 169
>Medtr7g085040.1 | flowering locus protein T | HC |
chr7:32874924-32877062 | 20130731
Length = 171
Score = 222 bits (565), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 103/160 (64%), Positives = 126/160 (78%), Gaps = 1/160 (0%)
Query: 13 VIGDVLDPFESSIPLRVTYGSRDVTNGCEFKPSQVPNQPRVSVGGDDLRTLYTLVLVDPD 72
VIGDVL PF +S+ L +R+++NGC KPSQ+ N+PRV+VGGDDLRT YT+V+VD D
Sbjct: 11 VIGDVLSPFTNSVSLSALINNREISNGCIMKPSQLVNRPRVNVGGDDLRTFYTMVMVDAD 70
Query: 73 APSPSNPSFREYLHWLVTDIPATTGASFGNEIVAYQSPRPTMGIHRFVFVLFRQQCRQRV 132
APSPSNP +EYLHW+VTDIPATT ASFG E+V Y+SP+P+ GIHRFV LF+Q R V
Sbjct: 71 APSPSNPFLKEYLHWMVTDIPATTSASFGKEVVFYESPKPSAGIHRFVIALFKQLGRDTV 130
Query: 133 YAPGWRQNFNTREFAELYNLGLPVAAVFFNCQRETGSGGR 172
+AP WR NFNT FAE+ NL + VA+V+FNCQRE G GGR
Sbjct: 131 FAPDWRHNFNTTNFAEINNLVI-VASVYFNCQRERGCGGR 169
>Medtr0020s0120.1 | terminal flower 1 | HC |
scaffold0020:150836-153326 | 20130731
Length = 172
Score = 221 bits (563), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 100/166 (60%), Positives = 129/166 (77%)
Query: 7 PLVVGRVIGDVLDPFESSIPLRVTYGSRDVTNGCEFKPSQVPNQPRVSVGGDDLRTLYTL 66
PL VGRVIG+V+D F S+ + VTY ++ V NG E PS V N+PRV +GG+D+R+ YTL
Sbjct: 7 PLSVGRVIGEVVDIFNPSVRMNVTYSTKQVANGHELMPSIVMNKPRVDIGGEDMRSAYTL 66
Query: 67 VLVDPDAPSPSNPSFREYLHWLVTDIPATTGASFGNEIVAYQSPRPTMGIHRFVFVLFRQ 126
++ DPDAPSPS+P RE+LHW+VTDIP TT SFGNEIV Y++P+P +GIHR+VF+LF+Q
Sbjct: 67 IMTDPDAPSPSDPHLREHLHWMVTDIPGTTDVSFGNEIVEYENPKPVIGIHRYVFILFKQ 126
Query: 127 QCRQRVYAPGWRQNFNTREFAELYNLGLPVAAVFFNCQRETGSGGR 172
+ RQ V +P R NFNTR F++ NLGLPVAAV+FN QRET + R
Sbjct: 127 RGRQTVRSPSSRDNFNTRRFSQENNLGLPVAAVYFNAQRETAARRR 172
>Medtr7g104460.1 | terminal flower 1 | HC | chr7:42325767-42324235 |
20130731
Length = 174
Score = 207 bits (527), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 126/170 (74%), Gaps = 1/170 (0%)
Query: 4 SRNPLVVGRVIGDVLDPFESSIPLRVTYGSRDVTNGCEFKPSQVPNQPRVSVGGDDLRTL 63
S+ PL+VGRVIG+VLD F +S+ + V+Y + V NG EF PS + +P+V + G D+R+
Sbjct: 5 SQEPLIVGRVIGEVLDSFTTSMKMTVSYNKKQVFNGHEFFPSTINTKPKVEIDGGDMRSF 64
Query: 64 YTLVLVDPDAPSPSNPSFREYLHWLVTDIPATTGASFGNEIVAYQSPRPTMGIHRFVFVL 123
YTLV+ DPD P PS+P RE+LHW+VTDIP TT A+FG E+V+Y+ P+P +GIHRFVFVL
Sbjct: 65 YTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVVSYEIPKPNIGIHRFVFVL 124
Query: 124 FRQQCRQRVYA-PGWRQNFNTREFAELYNLGLPVAAVFFNCQRETGSGGR 172
F+Q+ R+ V A P R FNTR FA +LGLPVAAV+FN QRET + R
Sbjct: 125 FKQKNRESVTASPSSRDYFNTRNFASQNDLGLPVAAVYFNAQRETAARRR 174
>Medtr0020s0120.2 | terminal flower 1 | HC |
scaffold0020:150836-153326 | 20130731
Length = 165
Score = 207 bits (526), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 96/166 (57%), Positives = 125/166 (75%), Gaps = 7/166 (4%)
Query: 7 PLVVGRVIGDVLDPFESSIPLRVTYGSRDVTNGCEFKPSQVPNQPRVSVGGDDLRTLYTL 66
PL VGRVIG+V+D F S+ + VTY ++ V NG E PS V N+PRV +GG+D+R+ YTL
Sbjct: 7 PLSVGRVIGEVVDIFNPSVRMNVTYSTKQVANGHELMPSIVMNKPRVDIGGEDMRSAYTL 66
Query: 67 VLVDPDAPSPSNPSFREYLHWLVTDIPATTGASFGNEIVAYQSPRPTMGIHRFVFVLFRQ 126
++ DPDAPSPS+P RE+LHW+VTDIP GNEIV Y++P+P +GIHR+VF+LF+Q
Sbjct: 67 IMTDPDAPSPSDPHLREHLHWMVTDIP-------GNEIVEYENPKPVIGIHRYVFILFKQ 119
Query: 127 QCRQRVYAPGWRQNFNTREFAELYNLGLPVAAVFFNCQRETGSGGR 172
+ RQ V +P R NFNTR F++ NLGLPVAAV+FN QRET + R
Sbjct: 120 RGRQTVRSPSSRDNFNTRRFSQENNLGLPVAAVYFNAQRETAARRR 165
>Medtr2g086270.1 | terminal flower 1 | HC | chr2:36279047-36277177 |
20130731
Length = 173
Score = 198 bits (504), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 124/168 (73%), Gaps = 1/168 (0%)
Query: 6 NPLVVGRVIGDVLDPFESSIPLRVTYGSRDVTNGCEFKPSQVPNQPRVSVGGDDLRTLYT 65
+PL +GRVIGDV+D F S++ + VTY ++ V NG EF PS V +P+V + G D+R+ +T
Sbjct: 6 DPLAIGRVIGDVVDYFTSTMKMSVTYNTKQVYNGHEFFPSSVTTKPKVQIHGGDMRSFFT 65
Query: 66 LVLVDPDAPSPSNPSFREYLHWLVTDIPATTGASFGNEIVAYQSPRPTMGIHRFVFVLFR 125
LV+ DPD P PS+P +E+LHW+VTDIP TT A+FG E++ Y+ PRP +GIHRFVF+L++
Sbjct: 66 LVMTDPDVPGPSDPYLKEHLHWIVTDIPGTTDATFGKEVMKYEMPRPNIGIHRFVFLLYK 125
Query: 126 QQCRQRVYA-PGWRQNFNTREFAELYNLGLPVAAVFFNCQRETGSGGR 172
Q+ RQ V P R FNT++FA+ +LG PVAAVFFN QRET + R
Sbjct: 126 QKRRQTVMKIPTSRDLFNTKKFAQDNDLGPPVAAVFFNAQRETAARRR 173
>Medtr1g060190.1 | terminal flower 1 | HC | chr1:26206613-26203086 |
20130731
Length = 177
Score = 184 bits (466), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 120/161 (74%), Gaps = 2/161 (1%)
Query: 4 SRNPLVVGRVIGDVLDPFESSIPLRVTYGSRDVTNGCEFKPSQVPNQPRVSVGGDDLRTL 63
+ +PL++GRVIGDV+D F + + VTY ++++ NG E PS V +PR+ +GG D+R+L
Sbjct: 5 TSDPLILGRVIGDVIDYFTPTTKMTVTYNNKEIFNGYEPFPSSVTTKPRIEIGGVDMRSL 64
Query: 64 YTLVLVDPDAPSPSNPSFREYLHWLVTDIPATTGASFGNEIVAYQSPRPTMGIHRFVFVL 123
+TL+++DPD P PS+P +E+LHW+VTDIP TT ++FG E+ +Y+ P+P +GIHR+VFVL
Sbjct: 65 FTLIMIDPDVPGPSDPYMKEHLHWMVTDIPGTTDSTFGKELTSYEKPKPNIGIHRYVFVL 124
Query: 124 FRQQ--CRQRVYAPGWRQNFNTREFAELYNLGLPVAAVFFN 162
F+Q+ + + AP R +FNTR F+ +LG+PVAA +FN
Sbjct: 125 FKQEKGKKHSIVAPFSRDHFNTRAFSAQNDLGVPVAAAYFN 165
>Medtr8g106840.1 | mother of FT and TFL1-like protein | HC |
chr8:45110726-45108124 | 20130731
Length = 173
Score = 176 bits (445), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 113/167 (67%), Gaps = 2/167 (1%)
Query: 1 MPNSRNPLVVGRVIGDVLDPFESSIPLRVTYGSRDVTNGCEFKPSQVPNQPRVSVGGDDL 60
M S +PLVVGRVIGDV+D F S+ + V +G + VTNGC+ KPS N P+V++ G+ +
Sbjct: 2 MAASVDPLVVGRVIGDVVDMFIPSVGMSVYFGPKHVTNGCDIKPSMAINPPKVTLTGN-M 60
Query: 61 RTLYTLVLVDPDAPSPSNPSFREYLHWLVTDIPATTGASFGNEIVAYQSPRPTMGIHRFV 120
LYTLV+ DPDAPSPS PS RE +HW+V DIP T G EI+ Y P+P +GIHR++
Sbjct: 61 DNLYTLVMTDPDAPSPSEPSMRELIHWIVVDIPGGTNPKRGKEILPYIGPKPPVGIHRYI 120
Query: 121 FVLFRQQCR-QRVYAPGWRQNFNTREFAELYNLGLPVAAVFFNCQRE 166
VLF Q+ V P R +FNTR FA NLGLPVA V+FN Q+E
Sbjct: 121 LVLFEQKGPIGMVEQPTSRVSFNTRYFASQMNLGLPVATVYFNSQKE 167
>Medtr5g078320.1 | phosphatidylethanolamine-binding protein | HC |
chr5:33474791-33475289 | 20130731
Length = 89
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 100 FGNEIVAYQSPRPTMGIHRFVFVLFRQQC-RQRVYAPGWRQNFNTREFAELYNLGLPVAA 158
+G EI+ Y P+P +GIHR++ VLF Q+ V P R +F T F+ NL L +A
Sbjct: 16 WGKEIIPYIEPKPPVGIHRYILVLFEQKGPIGMVEQPTSRVSFKTPYFSNQLNLSLHMAT 75
Query: 159 VFFNCQRE 166
++FN Q+E
Sbjct: 76 IYFNSQKE 83