Miyakogusa Predicted Gene

Lj1g3v3918170.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3918170.2 tr|G7K407|G7K407_MEDTR Chitinase
domain-containing protein OS=Medicago truncatula GN=MTR_5g025480
PE,78.38,0,Glyco_hydro_18,Glycoside hydrolase, family 18, catalytic
domain; no description,Glycoside hydrolase,,CUFF.31507.2
         (433 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g025480.1 | glycoside hydrolase family 18 protein | HC | c...   694   0.0  

>Medtr5g025480.1 | glycoside hydrolase family 18 protein | HC |
           chr5:10343436-10348547 | 20130731
          Length = 435

 Score =  694 bits (1792), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/437 (78%), Positives = 376/437 (86%), Gaps = 6/437 (1%)

Query: 1   MAKKRD-HRSAPSSGHRENRFQPPSRRNQRTDSTASSRS-KLIALFIVSSVIAIVA-YWL 57
           MAK RD HRS+ SSGHR+++    S+++Q T S + S + K++A FI+SSVIA+VA Y L
Sbjct: 1   MAKNRDQHRSSQSSGHRKSQINSSSQQDQLTHSASPSGAIKIVAFFIISSVIAVVAAYRL 60

Query: 58  RQSSPSQSKHKESYVYQRGLVTTDANYQDIVTENSNVPENSSHRHYTYPVLGYITPWNSR 117
           RQSSPS+S   E  VYQRGLVTTD NYQDI+TEN  V EN+  R Y YPVLGY+TPWNS 
Sbjct: 61  RQSSPSKSN--EFNVYQRGLVTTDTNYQDILTENVKVSENAFTRRYDYPVLGYVTPWNSH 118

Query: 118 GYELAKRFNSKFTHLSPVWYDLKSQQSSLVLEGRHNADRGWISDLRKAGEALILPRFVLE 177
           GYE+AKRFNSKFTHLSPVWYDLKSQQ+ LVLEGRHNADRGWIS+L+K GEALILPR VLE
Sbjct: 119 GYEMAKRFNSKFTHLSPVWYDLKSQQTDLVLEGRHNADRGWISELKKTGEALILPRVVLE 178

Query: 178 ASPAELLGKKKQRNKAINLIVTECKEMGYDGIVLESWSRWAAFGILHDPDMRNLALQFVQ 237
           ASP ELL KKK RNKAI+LIVTECKEMGYDG+VLESWSRWAA+GIL DP MRNLALQFV+
Sbjct: 179 ASPEELLRKKKHRNKAIDLIVTECKEMGYDGVVLESWSRWAAYGILRDPSMRNLALQFVK 238

Query: 238 QLGDALHSISSEKNSGQPLQLVYVIGPPSSEKLQEHDFGPRDLETLSGAVDGFSLMTYDF 297
           QLGDALHS+SSE  SGQ LQLVYVIGPPSSEKLQ HDFGP+DLETLS AVDGFSLMTYDF
Sbjct: 239 QLGDALHSVSSENTSGQKLQLVYVIGPPSSEKLQAHDFGPKDLETLSEAVDGFSLMTYDF 298

Query: 298 SNPHNPGPNAPLKWXXXXXXXXX-GTSSSRAQSVAPKILLGINFYGNDFSLSKDSGGGAI 356
           SNPHNPGPNAPLKW          G S++ AQ++APKI LGINFYGNDFSLSKDSGGGAI
Sbjct: 299 SNPHNPGPNAPLKWIQIILQILLGGASANSAQNIAPKIFLGINFYGNDFSLSKDSGGGAI 358

Query: 357 TGRDYLALLEKHRPLLQWDNNSGEHVFFYTDDKGIKHAVFYPSLKSISLRLEEAHSWGCG 416
            GRDYLALLEKHRP+LQWD NSGEHVFFYTDDK IKHAVFYPSLKSISLRLEEA +WGCG
Sbjct: 359 IGRDYLALLEKHRPVLQWDKNSGEHVFFYTDDKNIKHAVFYPSLKSISLRLEEARTWGCG 418

Query: 417 ISIWEIGQGLDYFFDLL 433
           ISIWEIGQGLDYFF LL
Sbjct: 419 ISIWEIGQGLDYFFYLL 435