Miyakogusa Predicted Gene

Lj1g3v3918090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3918090.1 NODE_39948_length_682_cov_133.857773.path4.1
         (164 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g006450.1 | leucyl-tRNA synthetase | HC | chr7:698037-7039...   317   4e-87
Medtr3g058540.1 | leucyl-tRNA synthetase | HC | chr3:23262925-23...   311   2e-85

>Medtr7g006450.1 | leucyl-tRNA synthetase | HC | chr7:698037-703921
           | 20130731
          Length = 1102

 Score =  317 bits (811), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 144/164 (87%), Positives = 160/164 (97%)

Query: 1   MKSVGIFDDEISKFQDPHKWLSYFPPLAVEDLKAFGLGCDWRRSFVTTDMNPYFDSFVRW 60
           ++SVGI D+EISKFQDP+KWL+YFPPLAVEDLKAFGLGCDWRRSF+TTDMNPYFDSFVRW
Sbjct: 172 LRSVGISDEEISKFQDPYKWLTYFPPLAVEDLKAFGLGCDWRRSFITTDMNPYFDSFVRW 231

Query: 61  QVRKLKSMGKIVKDVRHTIFSPLDGQPCADHDRATGEGVQPQEYTIIKMEVVAPFPPKFE 120
           Q+RKLKS+GK+VKDVR+TIFSPLDGQPCADHDRA+GEGVQPQEY IIKME+V+PFP KF+
Sbjct: 232 QMRKLKSLGKVVKDVRYTIFSPLDGQPCADHDRASGEGVQPQEYMIIKMELVSPFPDKFK 291

Query: 121 VLEGKKVFLAAATLRPETMYGQTNAWVLPDGKYGAFEISDTEVF 164
            LEGKKVFLAAATLRPETMYGQTNAWVLPDGKYGAFEI++TEVF
Sbjct: 292 ALEGKKVFLAAATLRPETMYGQTNAWVLPDGKYGAFEITETEVF 335


>Medtr3g058540.1 | leucyl-tRNA synthetase | HC |
           chr3:23262925-23261384 | 20130731
          Length = 513

 Score =  311 bits (797), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 142/164 (86%), Positives = 158/164 (96%)

Query: 1   MKSVGIFDDEISKFQDPHKWLSYFPPLAVEDLKAFGLGCDWRRSFVTTDMNPYFDSFVRW 60
           M+SVGI D EIS+FQDP+KWLSYFPPLAV+DLKAFG GCDWRRSF+TTDMNPYFD+FVRW
Sbjct: 172 MRSVGISDAEISEFQDPYKWLSYFPPLAVDDLKAFGFGCDWRRSFITTDMNPYFDAFVRW 231

Query: 61  QVRKLKSMGKIVKDVRHTIFSPLDGQPCADHDRATGEGVQPQEYTIIKMEVVAPFPPKFE 120
            +RKLK+ GK+VKDVR+T+FSPLDGQPCADHDRA+GEGVQPQEYTIIKMEVV+PFP KF+
Sbjct: 232 HMRKLKASGKVVKDVRYTVFSPLDGQPCADHDRASGEGVQPQEYTIIKMEVVSPFPEKFK 291

Query: 121 VLEGKKVFLAAATLRPETMYGQTNAWVLPDGKYGAFEISDTEVF 164
           VLEGKKVFLAAATLRPETMYGQTNAWVLPDGKYGAFEI++TEVF
Sbjct: 292 VLEGKKVFLAAATLRPETMYGQTNAWVLPDGKYGAFEINETEVF 335