Miyakogusa Predicted Gene

Lj1g3v3918020.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3918020.1 Non Characterized Hit- tr|G7ZXM9|G7ZXM9_MEDTR
Putative uncharacterized protein (Fragment)
OS=Medicag,90.11,3.00018e-42,BEACH,BEACH domain; Beige/BEACH
domain,BEACH domain; no description,BEACH domain; Beach,BEACH
domain,CUFF.31498.1
         (91 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g075660.1 | WD-40 repeat protein/beige protein | HC | chr7...   175   8e-45
Medtr8g035750.1 | WD-40 repeat protein/beige protein | HC | chr8...   175   1e-44
Medtr3g100060.1 | BEACH domain LvsC-like protein, putative | HC ...    93   5e-20
Medtr1g071260.1 | beige/BEACH and WD40 domain protein | HC | chr...    79   1e-15
Medtr1g102710.1 | Serine/Threonine kinase | HC | chr1:46423862-4...    49   1e-06

>Medtr7g075660.1 | WD-40 repeat protein/beige protein | HC |
            chr7:28381508-28350580 | 20130731
          Length = 2945

 Score =  175 bits (443), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 80/91 (87%), Positives = 85/91 (93%)

Query: 1    MFSDISGTWNGVLEDMSDVKELVRELFYLPEVLTNENSIDFGTTQLGGKLDTVRLLAWAE 60
            MFSDISGTWNGVLEDMSDVKELV ELFY PEVLTNENSIDFGTTQLGGKLDTV+L AWAE
Sbjct: 2341 MFSDISGTWNGVLEDMSDVKELVPELFYQPEVLTNENSIDFGTTQLGGKLDTVKLPAWAE 2400

Query: 61   NPVDFVHTNRMVLESEYVSAHLHEWIDLIFG 91
            NP+DF+H +R  LESEYVS+HLHEWIDLIFG
Sbjct: 2401 NPIDFIHKHRKALESEYVSSHLHEWIDLIFG 2431


>Medtr8g035750.1 | WD-40 repeat protein/beige protein | HC |
            chr8:13037122-13066469 | 20130731
          Length = 2925

 Score =  175 bits (443), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 83/91 (91%), Positives = 85/91 (93%)

Query: 1    MFSDISGTWNGVLEDMSDVKELVRELFYLPEVLTNENSIDFGTTQLGGKLDTVRLLAWAE 60
            MFSDIS TWNGVLEDMSDVKELV ELFYLPEVLTNENSIDFGTTQLG KLD+VRL AWAE
Sbjct: 2329 MFSDISATWNGVLEDMSDVKELVPELFYLPEVLTNENSIDFGTTQLGEKLDSVRLPAWAE 2388

Query: 61   NPVDFVHTNRMVLESEYVSAHLHEWIDLIFG 91
            NPVDFVH +RM LESEYVSAHLHEWIDLIFG
Sbjct: 2389 NPVDFVHKHRMALESEYVSAHLHEWIDLIFG 2419


>Medtr3g100060.1 | BEACH domain LvsC-like protein, putative | HC |
            chr3:45964613-45936555 | 20130731
          Length = 3254

 Score = 93.2 bits (230), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 1/92 (1%)

Query: 1    MFSDISGTWNGVLEDMSDVKELVRELFYLPEVLTNENSIDFGTTQLGGKLDTVRLLAWAE 60
            +F  I GT+   L + SDVKEL+ E FY+PE L N NS   G  Q G  +  V L  W++
Sbjct: 2724 LFQSIEGTFKNCLTNTSDVKELIPEFFYMPEFLLNSNSYHLGVRQDGEPIGDVFLPPWSK 2783

Query: 61   -NPVDFVHTNRMVLESEYVSAHLHEWIDLIFG 91
             +P +F+  NR  LESEYVS++LH WIDL+FG
Sbjct: 2784 GSPEEFIRRNREALESEYVSSNLHHWIDLVFG 2815


>Medtr1g071260.1 | beige/BEACH and WD40 domain protein | HC |
            chr1:31608148-31589045 | 20130731
          Length = 3612

 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 3/94 (3%)

Query: 1    MFSDISGTWNGVLE--DMSDVKELVRELFYLPEVLTNENSIDFGTTQLGGKLDTVRLLAW 58
            +F+ +  TW       + SDVKEL+ E FY+PE L N+ ++D G  Q G K+  V L  W
Sbjct: 3121 LFNSVRDTWLSAAGKGNTSDVKELIPEFFYMPEFLDNQFNLDLGEKQSGEKVGDVMLPPW 3180

Query: 59   AENPV-DFVHTNRMVLESEYVSAHLHEWIDLIFG 91
            A+    +F+  +R  LES++VS +LH WIDLIFG
Sbjct: 3181 AKGSAREFISKHREALESDFVSENLHHWIDLIFG 3214


>Medtr1g102710.1 | Serine/Threonine kinase | HC |
           chr1:46423862-46415204 | 20130731
          Length = 1637

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/35 (57%), Positives = 25/35 (71%)

Query: 57  AWAENPVDFVHTNRMVLESEYVSAHLHEWIDLIFG 91
           +WAE+P DF+  +R  LES  VS  LH WID+IFG
Sbjct: 483 SWAESPEDFIKLHRDALESNRVSFQLHHWIDIIFG 517