Miyakogusa Predicted Gene

Lj1g3v3906720.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3906720.1 tr|G7K3M7|G7K3M7_MEDTR Ferredoxin OS=Medicago
truncatula GN=MTR_5g006320 PE=4 SV=1,63.54,8e-17,
,NODE_49741_length_734_cov_251.583099.path2.1
         (90 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g006320.1 | 2Fe-2S ferredoxin superfamily protein | HC | c...    91   2e-19

>Medtr5g006320.1 | 2Fe-2S ferredoxin superfamily protein | HC |
          chr5:857389-856587 | 20130731
          Length = 153

 Score = 91.3 bits (225), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/96 (63%), Positives = 67/96 (69%), Gaps = 9/96 (9%)

Query: 1  MATLQFTSFSLFRPKKHPTTTTLSSTFQLNTLPRLASHKSP-----SLTVRS-YKVVIEH 54
          MATLQFT  +LFR +KHPTT  L    QLNT PRL S   P     + TVRS YKVVIEH
Sbjct: 1  MATLQFTPLTLFR-QKHPTTK-LPYPSQLNTRPRLGSGSHPSSPSLTFTVRSSYKVVIEH 58

Query: 55 EGQTTQLEVEPDETILSKALDSCLHDLPCSSSQWIC 90
          EG+TTQLEVEPDETILSKALDS L D+P      +C
Sbjct: 59 EGKTTQLEVEPDETILSKALDSGL-DVPHDCKLGVC 93