Miyakogusa Predicted Gene

Lj1g3v3904500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3904500.1 Non Characterized Hit- tr|A0YQL7|A0YQL7_LYNSP
Putative uncharacterized protein OS=Lyngbya sp.
(strai,33.12,0.0000000000003,seg,NULL; DUF3529,Protein of unknown
function DUF3529,CUFF.31484.1
         (261 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g084160.1 | cofactor assembly of complex protein C, putati...   317   6e-87

>Medtr7g084160.1 | cofactor assembly of complex protein C, putative
           | HC | chr7:32449780-32448251 | 20130731
          Length = 259

 Score =  317 bits (813), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 153/220 (69%), Positives = 175/220 (79%), Gaps = 2/220 (0%)

Query: 43  RSRKLHVSLHDAA--TSSSAXXXXXXXXXXXXXXXAGYSMASYYTSLGLFVISVPGLWSL 100
           + +KL +SLH++A   + +                 GYS+ASYYTSLGLFVISVPGLWSL
Sbjct: 39  KPKKLRLSLHESAEFITQNQQQLLNPNSLFLLTETTGYSLASYYTSLGLFVISVPGLWSL 98

Query: 101 XXXXXXXXXXXXTFIGEGEKKPPNQVAGEILSFFTRNNFQVTDRGETVTFEGMMVPSRGQ 160
                       TFI EG  K P+QVAGE+LSFFTRNNF V DRGET+TFEG+MVPSRGQ
Sbjct: 99  IKRSVKSKIVKKTFIDEGGNKAPSQVAGEVLSFFTRNNFAVVDRGETITFEGVMVPSRGQ 158

Query: 161 AALLTFCTCISLASVALVLTITVPDFGNNWFGITILSPLAGAYYWTRASRKEQIKVKLIV 220
           AALLTFCTCISLASV+LVLTITVPD GNNWF +TILSPLAGAYYWTRASRKEQ++VK+IV
Sbjct: 159 AALLTFCTCISLASVSLVLTITVPDIGNNWFWLTILSPLAGAYYWTRASRKEQVQVKMIV 218

Query: 221 GDDGTLSEIIVQGDDQQVEEMRKDLKFSEKGMVYVKGILE 260
            +DGTLSEI+VQGDDQQVE+MRK+LKFSEKGMVYVKG+ E
Sbjct: 219 KEDGTLSEIVVQGDDQQVEQMRKELKFSEKGMVYVKGLFE 258