Miyakogusa Predicted Gene

Lj1g3v3904350.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3904350.1 tr|G7KX94|G7KX94_MEDTR RING finger protein
OS=Medicago truncatula GN=MTR_7g084020 PE=4
SV=1,75.56,0,RING/U-box,NULL; no description,Zinc finger,
RING/FYVE/PHD-type; seg,NULL; zf-C3HC4,Zinc finger, C3H,CUFF.31476.1
         (743 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g084020.1 | RING finger protein | HC | chr7:32376240-32370...  1068   0.0  
Medtr1g054280.1 | zinc finger, C3HC4 type (RING finger) protein ...    53   1e-06

>Medtr7g084020.1 | RING finger protein | HC | chr7:32376240-32370124
           | 20130731
          Length = 744

 Score = 1068 bits (2761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/707 (75%), Positives = 593/707 (83%), Gaps = 16/707 (2%)

Query: 51  AIGSLQISDNPGSSTPAAEDSGGPSEKVTELGSPNGMKASPPQNSRTHSRSYSGRRTVGS 110
           ++GSLQI D PG S PAAE+SG PSEKVTEL S +GMK +P +NSRT SRS+SGRRTVGS
Sbjct: 40  SLGSLQIHDLPGPSNPAAENSGVPSEKVTELESSSGMK-TPQRNSRTQSRSHSGRRTVGS 98

Query: 111 SPSIGRT-----GNRNQQAPGSVNSHGSTSSAGRKSQMVNGNYLLNFQYDPIXXXXXXXX 165
           S   G+T      +RNQQ  GSV S GST  AGRKSQM N N+LLNFQYDPI        
Sbjct: 99  SQYEGKTTGTVSSHRNQQTTGSVYSQGSTPLAGRKSQMANANHLLNFQYDPISRSQQRGP 158

Query: 166 XXXXXXXXXKR-KPYNKDLFLQANYKFIVLDSGNYSPESMDPDKMLQWEDIVCVTFFTPF 224
                    ++ +PYNKDLFLQAN+KF+VLDSGNYSP+SMDPDKMLQWEDI+CVT+ TPF
Sbjct: 159 PPPPPARRQRKTRPYNKDLFLQANFKFMVLDSGNYSPDSMDPDKMLQWEDIICVTYSTPF 218

Query: 225 PVQCPICLEYPLCPQITSCGHIFCFPCILQYLFLGEEDHKSDCCKRCPLCFMMISAKDLY 284
           PVQCPICLE+PLCPQITSCGHIFCFPCILQYL LGEEDHK D  KRCPLCF+ IS KDLY
Sbjct: 219 PVQCPICLEHPLCPQITSCGHIFCFPCILQYLMLGEEDHKGDRWKRCPLCFVTISVKDLY 278

Query: 285 TVHITNVKQHQVGENVDFTFLTRKKDSFTLSHKNKQEIDITSCDNGYLCDPFSKFTLTSD 344
           T+HITNVKQ+QVG+N++FTFLTRKKDSFTLSHKNKQE D +SC  G +CDPFSKFTLTSD
Sbjct: 279 TLHITNVKQYQVGDNIEFTFLTRKKDSFTLSHKNKQEGDNSSCGRGDVCDPFSKFTLTSD 338

Query: 345 VDLSVRHAISDLDGWLARADSGLVDDLEKLPYVCAAMQQLEQRKKYWNELRAFDSEKSSK 404
           VDLSVRHAISDLDGWLARADSGLVDD+EKLPYV AAMQQL+QRKKYWNE +A  SEKSS 
Sbjct: 339 VDLSVRHAISDLDGWLARADSGLVDDMEKLPYVSAAMQQLKQRKKYWNEHKACYSEKSSN 398

Query: 405 LIDYGHQIPSIAADAMDTDDENCSNGSRTSSTDSRD------LNKSIAGACQDQTLDVEK 458
           LIDY  Q PSI+ +A D+DDE+CSNGSRTSSTD  D      L+KS AG CQD TLDV+K
Sbjct: 399 LIDYAPQTPSISTNAWDSDDESCSNGSRTSSTDFPDQSKVVILDKSTAGTCQDDTLDVDK 458

Query: 459 VSMEQEMKLSSSFEEKSGIQMDSNGIGDAKENDSYNFYQAADGQHLILHPLNMKCLLNHY 518
           V  E+E+ LSSS+EEK+ IQ  SNGIGDAKENDSYNFYQA DGQHLILHPLN KCLL+HY
Sbjct: 459 VLAEKEITLSSSYEEKNCIQGHSNGIGDAKENDSYNFYQAVDGQHLILHPLNTKCLLHHY 518

Query: 519 GSYDTLPHRISGRILQLETVTQSEAMRRRYRFLSHFPLTTTFQLSEIDLSEILPPEALAP 578
           GSYD LPHRISGRILQLETVTQSEAMRRRYRFLSHFPLTT FQL E+DLSE+LPPEALAP
Sbjct: 519 GSYDKLPHRISGRILQLETVTQSEAMRRRYRFLSHFPLTTIFQLCEVDLSEMLPPEALAP 578

Query: 579 FMDEIKKRSNQRKQLAKKEQRDKMKAEASATYPFPVPS-YQLTSRDDPP-FSMDDFEALG 636
           FMDEIKKR+NQRKQ+AKKEQ++K+KAEA+  Y   + + YQ  SRDDPP FSMDDFEALG
Sbjct: 579 FMDEIKKRANQRKQIAKKEQKEKLKAEATDNYALSMSTHYQFISRDDPPTFSMDDFEALG 638

Query: 637 NSAMSSSPPLVGERRLFSSVTRLGFAAGHDSPSLQIQEETSGPYNNNKSTDSSGTAGSRN 696
           NSA+SSSPP+VGER+LFSSVTRLGFAAGHDSPS   Q ETS  ++NN    SSGTAG RN
Sbjct: 639 NSALSSSPPVVGERKLFSSVTRLGFAAGHDSPSFPTQ-ETSDLHSNNSIAGSSGTAGLRN 697

Query: 697 GETPSYSNVISRAESNNSLNAPKTNDVGKKGKKPNRVLLSTAGVRRY 743
           GET SYSNVISRAESN + NAPKTND+GKKGKKPNRVLLST+G RRY
Sbjct: 698 GETLSYSNVISRAESNGTSNAPKTNDLGKKGKKPNRVLLSTSGGRRY 744


>Medtr1g054280.1 | zinc finger, C3HC4 type (RING finger) protein |
           LC | chr1:23323943-23324740 | 20130731
          Length = 265

 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 5/60 (8%)

Query: 228 CPICLEYPLCPQITSCGHIFCFPCILQYLFLGEEDHKSDCCKRCPLCFMMISAKDLYTVH 287
           C ICL+    P +T CGH+FC+PC+ ++L L     +S   K CP+C   ++ K++  ++
Sbjct: 78  CNICLDLAKNPVVTCCGHLFCWPCLYRWLHL-----RSSQTKACPVCKGEVTDKNVIPIY 132