Miyakogusa Predicted Gene

Lj1g3v3904260.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3904260.1 Non Characterized Hit- tr|K4BIA2|K4BIA2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,53.33,2e-16,seg,NULL; coiled-coil,NULL,CUFF.31448.1
         (190 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g083930.1 | hypothetical protein | HC | chr7:32337874-3233...   256   8e-69

>Medtr7g083930.1 | hypothetical protein | HC |
           chr7:32337874-32338742 | 20130731
          Length = 193

 Score =  256 bits (655), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 130/195 (66%), Positives = 147/195 (75%), Gaps = 7/195 (3%)

Query: 1   MACTIDFRNLDEGFGGKTYKRKREQAQALEDALFNNDGVDSMDTDEAAPPPAKRTALPSS 60
           MACTIDFR+LDEGFGGKTYKRKREQAQA+EDA      + SM+TD+ APPPAKR+ALPS 
Sbjct: 1   MACTIDFRHLDEGFGGKTYKRKREQAQAIEDAKMEE--IVSMETDDTAPPPAKRSALPSL 58

Query: 61  EDPNKP-----SFGQPSYDGVIAGRVSGRKWKQVRTRRSSAVNVSRKGTTFEQREREKMI 115
            DPNKP     SFG P+YDGVIAG+VSGRKWKQVRTRR+SA+ VS+KGTTFE+R REK I
Sbjct: 59  SDPNKPTFSAVSFGAPTYDGVIAGKVSGRKWKQVRTRRASALQVSKKGTTFEERAREKRI 118

Query: 116 KKAYKERITELXXXXXXXXXXXXXXXXXXXXXXXXXILKSGTKFQKITNPNTLKKIAKSK 175
           K AYKE++TEL                         +LKSGTKFQKITNP TLKKIAKSK
Sbjct: 119 KTAYKEKMTELKEAIRMNKVEKRKKREESEKRKKENVLKSGTKFQKITNPKTLKKIAKSK 178

Query: 176 QRKQLRVVSDDLFKK 190
           QRKQLR+V DD+ KK
Sbjct: 179 QRKQLRMVPDDMIKK 193