Miyakogusa Predicted Gene

Lj1g3v3892000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3892000.1 Non Characterized Hit- tr|I1N6R6|I1N6R6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=3,44.27,7e-19,coiled-coil,NULL,gene.g35533.t1.1
         (194 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g049530.1 | MADS-box protein AGL84 | LC | chr2:21819458-21...    89   3e-18
Medtr4g045977.1 | MADS-SRF-like domain protein | LC | chr4:15977...    84   6e-17
Medtr2g049630.1 | MADS-SRF-like domain protein | LC | chr2:21875...    84   8e-17
Medtr2g049610.1 | MADS-box transcription factor family protein |...    79   2e-15
Medtr4g107170.1 | MADS-box transcription factor family protein |...    70   2e-12
Medtr6g005450.1 | MADS-box transcription factor family protein |...    67   1e-11
Medtr6g005440.1 | MADS-box transcription factor family protein |...    66   2e-11
Medtr1g114730.1 | MADS-box transcription factor family protein |...    65   4e-11
Medtr6g018920.1 | MADS-box transcription factor family protein |...    61   6e-10
Medtr1g115290.1 | MADS-box protein, putative | LC | chr1:5199979...    61   7e-10

>Medtr2g049530.1 | MADS-box protein AGL84 | LC |
           chr2:21819458-21818880 | 20130731
          Length = 192

 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 40/82 (48%), Positives = 56/82 (68%)

Query: 1   MENFFDNRKVMVEAEIARVKKEIFKVKYPTWDPCFNELTMEQLSFFMAKLSAKIEACDHR 60
           ++++F N+K  +E EI++V+KEI K KYPTWDPCF  +  EQL  F A ++AKIEACD R
Sbjct: 90  VKDYFANKKNKIEGEISKVQKEIVKNKYPTWDPCFINMDGEQLKAFTAIVNAKIEACDQR 149

Query: 61  INMLKMERQSEACSSMQKMAQE 82
           I+MLK   Q +  S++    Q 
Sbjct: 150 ISMLKTMHQGDQTSALHDTPQR 171


>Medtr4g045977.1 | MADS-SRF-like domain protein | LC |
           chr4:15977633-15978817 | 20130731
          Length = 394

 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 73/125 (58%), Gaps = 10/125 (8%)

Query: 1   MENFFDNRKVMVEAEIARVKKEIFKVKYPTWDPCFNELTMEQLSFFMAKLSAKIEACDHR 60
           +  +F+ RK  VEA+I +V+K+  K KYPTW   F  +   QL  F+A ++ KI+ACDH+
Sbjct: 88  VHKYFEFRKKNVEAKITKVRKDTLKEKYPTWHQDFQNMEANQLRDFIATVNDKIQACDHK 147

Query: 61  INMLKMERQSEACSSMQKMAQESAESSNPRQLNSMLNISQCQLVCAPVKPLNDNSVMVDS 120
           I+MLK        + MQ M QES  SS+ RQ+N M + S  Q+     + +N  + MVD 
Sbjct: 148 ISMLK------NNALMQNMVQESVVSSHSRQVNVMHSNSIPQM----QQHVNGTNEMVDL 197

Query: 121 TGQVD 125
           T  VD
Sbjct: 198 TNHVD 202


>Medtr2g049630.1 | MADS-SRF-like domain protein | LC |
           chr2:21875850-21876962 | 20130731
          Length = 370

 Score = 84.0 bits (206), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 32/195 (16%)

Query: 1   MENFFDNRKVMVEAEIARVKKEIFKVKYPTWDPCFNELTMEQLSFFMAKLSAKIEACDHR 60
           ++++F+N+K  +E+EI++V KEI    YPTW PCF  +  EQL  F+  L  KI+AC  R
Sbjct: 90  VKDYFENKKNKIESEISKVHKEILMKMYPTWHPCFMNMNGEQLKTFIGILGGKIQACKKR 149

Query: 61  INMLKMERQSEACSSMQ---------------------------KMAQESAESSNPRQLN 93
           I+MLK  ++S+  S  Q                           K+    AE   PR+L 
Sbjct: 150 ISMLKKMQESDETSFTQNTVDPLNSPVSLPPVLSTGTNQFGEVEKLDDVMAE---PRELT 206

Query: 94  SMLNISQCQLVCAPVKPLNDNSVMVDSTGQVDASVTAFGSVQNMARESAESSNASQLNSM 153
             L   + +L     KP  +    +D  G++D +       Q+MA+E    SN++Q   M
Sbjct: 207 GQLGELEEELNNFVAKPNQEWLAKLDGIGEMDFTQNT-AHTQSMAKEIFYPSNSNQFEGM 265

Query: 154 LN-ISQGQLVSAPTK 167
            +  SQ Q +  P K
Sbjct: 266 NDGFSQWQPIYDPLK 280


>Medtr2g049610.1 | MADS-box transcription factor family protein | LC
           | chr2:21867992-21868711 | 20130731
          Length = 239

 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 66/115 (57%), Gaps = 17/115 (14%)

Query: 1   MENFFDNRKVMVEAEIARVKKEIFKVKYPTWDPCFNELTMEQLSFFMAKLSAKIEACDHR 60
           ++++F N+K  VE EI++V KEI    YPTW PCF  +  EQL  F+  L AKI+AC+H+
Sbjct: 85  VKDYFANKKNKVEGEISKVHKEIVMKMYPTWHPCFMNMDGEQLKTFIGILDAKIQACNHK 144

Query: 61  INMLKMERQSEACSSMQKMAQESAESSNPRQLNS--MLNISQCQLVCAPVKPLND 113
           I+MLK            KM Q    + N   LN+  M N++   +V   +KPL+D
Sbjct: 145 ISMLK------------KMQQ---RTENGFMLNTTQMQNVAPKNVVSTHLKPLSD 184


>Medtr4g107170.1 | MADS-box transcription factor family protein | LC
           | chr4:44259983-44260750 | 20130731
          Length = 255

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 51/72 (70%)

Query: 1   MENFFDNRKVMVEAEIARVKKEIFKVKYPTWDPCFNELTMEQLSFFMAKLSAKIEACDHR 60
           ++++F+N+K  VE +I +V+++I    YPTW P F+ L   QL  F+A ++AKI+AC+H+
Sbjct: 88  VKDYFENKKEKVETKINKVRRDIISNIYPTWHPHFSNLDGNQLRDFIATINAKIQACNHK 147

Query: 61  INMLKMERQSEA 72
           I+MLK  +Q E 
Sbjct: 148 ISMLKNMQQIET 159


>Medtr6g005450.1 | MADS-box transcription factor family protein | LC
           | chr6:751556-752599 | 20130731
          Length = 347

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 7/114 (6%)

Query: 1   MENFFDNRKVMVEAEIARVKKEIFKVKYPTWDPCFNELTMEQLSFFMAKLSAKIEACDHR 60
           ++ +F  R   VE EI++V+KE FK+KY TWD  FN L  EQL  F + L  K++AC+ +
Sbjct: 91  VQEYFKERMKKVEFEISKVRKEKFKMKYQTWDESFNFLEDEQLRLFASILDFKLDACNLK 150

Query: 61  INMLKMERQSEACS----SMQKMAQESAESSNPRQLNSMLNISQCQLVCAPVKP 110
           +NMLK + + ++ +     +  +       SNP   +S  N+ Q  +  A + P
Sbjct: 151 MNMLKGDLRGKSIALETNKIDNLNSSPYLDSNP---SSYFNLPQNNMSQAHIYP 201


>Medtr6g005440.1 | MADS-box transcription factor family protein | LC
           | chr6:745653-746600 | 20130731
          Length = 315

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 43/67 (64%)

Query: 1   MENFFDNRKVMVEAEIARVKKEIFKVKYPTWDPCFNELTMEQLSFFMAKLSAKIEACDHR 60
           ++ +F  R   VE EI +V+KE  K+KYPTWD  +N    EQL  F+  L +K++ACD +
Sbjct: 91  VQEYFKERMKKVELEIYKVRKERLKMKYPTWDESYNSFGNEQLRSFVRFLDSKLDACDQK 150

Query: 61  INMLKME 67
           +NM K E
Sbjct: 151 MNMRKDE 157


>Medtr1g114730.1 | MADS-box transcription factor family protein | LC
           | chr1:51792967-51791924 | 20130731
          Length = 347

 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 4/111 (3%)

Query: 1   MENFFDNRKVMVEAEIARVKKEIFKVKYPTWDPCFNELTMEQLSFFMAKLSAKIEACDHR 60
           ++ +F  R   +E EI +V+KE  K+ YPTW+  FN L  EQL  F +KL AK++AC+ +
Sbjct: 91  VQEYFKERIRKLEFEITKVRKEKLKMMYPTWNESFNSLGAEQLILFASKLEAKLDACNQK 150

Query: 61  INMLKMERQSEACSS----MQKMAQESAESSNPRQLNSMLNISQCQLVCAP 107
            +MLK + + +  +     + K+    + + NP    +++  S  Q    P
Sbjct: 151 KHMLKEDLKGKTIAHESHKVDKLISTPSLTPNPSYYFNLMQNSMSQAQTYP 201


>Medtr6g018920.1 | MADS-box transcription factor family protein | HC
           | chr6:7327877-7326837 | 20130731
          Length = 346

 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 45/65 (69%)

Query: 1   MENFFDNRKVMVEAEIARVKKEIFKVKYPTWDPCFNELTMEQLSFFMAKLSAKIEACDHR 60
           ++ +F  R   ++ EI++V+KE  K+ YP+WD  +N L +EQ+  F + L +K++AC+ R
Sbjct: 91  VQEYFKERMKKIKFEISKVRKEKIKMMYPSWDESYNSLGVEQVRSFASMLDSKLDACNQR 150

Query: 61  INMLK 65
           ++MLK
Sbjct: 151 MHMLK 155


>Medtr1g115290.1 | MADS-box protein, putative | LC |
           chr1:51999791-52000328 | 20130731
          Length = 156

 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 42/69 (60%)

Query: 3   NFFDNRKVMVEAEIARVKKEIFKVKYPTWDPCFNELTMEQLSFFMAKLSAKIEACDHRIN 62
           ++F+ +K  V+AEI +  K+I  +KYPTW      +   QL    A + AKI+AC+H+IN
Sbjct: 56  DYFEIKKAKVKAEIIKAHKDIIDIKYPTWHQDLVNMEASQLRDLSAVIDAKIQACNHKIN 115

Query: 63  MLKMERQSE 71
           M K E  +E
Sbjct: 116 MFKSEMVNE 124