Miyakogusa Predicted Gene

Lj1g3v3891960.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3891960.1 Non Characterized Hit- tr|K3ZJC1|K3ZJC1_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si026674,61.29,0.0000000000003,seg,NULL,CUFF.31357.1
         (308 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g026520.1 | transmembrane protein, putative | HC | chr7:88...   474   e-134

>Medtr7g026520.1 | transmembrane protein, putative | HC |
           chr7:8800563-8794554 | 20130731
          Length = 554

 Score =  474 bits (1219), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 227/305 (74%), Positives = 256/305 (83%), Gaps = 8/305 (2%)

Query: 12  LLQPFLVLCAMVTGVGLLLLAIRPLDPP----IRVDFPRD----FEXXXXXXXXXXXXXX 63
           LLQPFLV+CA +TGVGLL++A+RPLDP     I VD+ RD     +              
Sbjct: 12  LLQPFLVMCATITGVGLLIMALRPLDPRPGAVIEVDYARDSDEFLDFNSTGLNVGGEEPR 71

Query: 64  XXXXEKPCATVEEMGRDFEAGVVGMETVRVRRIIEDHFVLNGASRIRDLPPDQFCSHGFV 123
                + CATVEEMG+DFE G V  E +RVRR+IE HFVLNGASR+RDLPPD+FC HGFV
Sbjct: 72  PPRTSRSCATVEEMGKDFENGFVVKEMLRVRRVIEQHFVLNGASRVRDLPPDKFCRHGFV 131

Query: 124 LGKTAEAGFGNEMYKVLTAAALSIMLNRSLIIGQTRGKYPFGEYISYSNFTFTMKEIKHL 183
           LGKTAEAGFGNEMYK+L+AAALSIMLNRSLIIGQTR KYPF +YISY+NFTFT+KEIKHL
Sbjct: 132 LGKTAEAGFGNEMYKLLSAAALSIMLNRSLIIGQTRSKYPFQDYISYANFTFTLKEIKHL 191

Query: 184 WRQNGCESKYGRQLVMRTDDFEKPAQTNVLCSNWKEWEQPIIWFQGTTDHVAAQFFLKNI 243
           WR NGCES YGR+LVMRTDDFEKPAQ+NVLCSNWKEWEQPIIWFQGT D VA+QFFLKNI
Sbjct: 192 WRLNGCESIYGRKLVMRTDDFEKPAQSNVLCSNWKEWEQPIIWFQGTNDAVASQFFLKNI 251

Query: 244 HSQMRIAAFDLFGDPKVLGSRPNVFGELMRVLISPTKDVEAAVNWVIGGEENPDITLHMR 303
           H QM++AAFDLFGDP+VLGS+PNVFGELMRVLISP+KDVEAAVNWVIGG++NPDI+LHMR
Sbjct: 252 HPQMKVAAFDLFGDPQVLGSQPNVFGELMRVLISPSKDVEAAVNWVIGGDKNPDISLHMR 311

Query: 304 MLMNR 308
           M  NR
Sbjct: 312 MQTNR 316