Miyakogusa Predicted Gene
- Lj1g3v3881740.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3881740.1 Non Characterized Hit- tr|B9S6J5|B9S6J5_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,65.57,0.0000000000009,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; seg,NULL,gene.g35514.t1.1
(314 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g071817.1 | SKIP interacting protein, putative | HC | chr5... 413 e-116
Medtr5g071840.1 | SKIP interacting protein, putative | HC | chr5... 412 e-115
Medtr4g087780.1 | hypothetical protein | HC | chr4:34535979-3453... 177 1e-44
Medtr1g016290.1 | CHUP1 | HC | chr1:4303228-4308457 | 20130731 155 3e-38
Medtr1g093850.1 | CHUP1 | HC | chr1:42112497-42107561 | 20130731 144 1e-34
Medtr4g124070.2 | hydroxyproline-rich glycoprotein family protei... 144 1e-34
Medtr4g124070.1 | hydroxyproline-rich glycoprotein family protei... 144 1e-34
Medtr4g124070.3 | hydroxyproline-rich glycoprotein family protei... 144 1e-34
Medtr4g124070.5 | hydroxyproline-rich glycoprotein family protei... 144 1e-34
Medtr4g124070.4 | hydroxyproline-rich glycoprotein family protei... 144 1e-34
Medtr5g053270.1 | CHUP1 | HC | chr5:21962356-21968047 | 20130731 140 1e-33
Medtr4g089110.1 | hydroxyproline-rich glycoprotein family protei... 50 3e-06
>Medtr5g071817.1 | SKIP interacting protein, putative | HC |
chr5:30515952-30513197 | 20130731
Length = 402
Score = 413 bits (1062), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/323 (67%), Positives = 245/323 (75%), Gaps = 24/323 (7%)
Query: 1 MLKEENESEITY-LKKKVELQMARNESLQRENQELREEVARLKSQIISFKAHDMERKSIL 59
ML+ ENESEIT KK++E+ MARNE LQ+ENQEL+EEV+RLKSQIIS KAH+MERK+IL
Sbjct: 1 MLQVENESEITTSFKKRLEIHMARNELLQKENQELKEEVSRLKSQIISLKAHNMERKTIL 60
Query: 60 WKKIQKSIDGNNAD-------------CEKSSENGNVHSNPGFQDSAXXXXXXXXX---- 102
WKKIQKSID NN+D CEKSSEN + FQDS+
Sbjct: 61 WKKIQKSIDDNNSDSHHTLKPALQAIMCEKSSENQD------FQDSSTSPRKEKSSIVLP 114
Query: 103 XXXXXXXXSSNLLPSHKNERGIKMQQTIAXXXXXXXXXXXFGLKAVRRVPEVIELYRSLT 162
S+ PSHKNE+G+KMQ T A GLK VRRVPEVIELYRSLT
Sbjct: 115 PTPPPKPASTLFSPSHKNEKGMKMQPTAAPPPPPTPSKSSIGLKTVRRVPEVIELYRSLT 174
Query: 163 RKDVATENRIHQNGIPVVAFTRNMIEEIENRSTYLTAIKSEVQRQGEFISFLIKEVEAAS 222
RKD EN+ H NGIP VAFTRNMIEEIENRS +L+AIKSEVQ Q EFISFLIK+VE+AS
Sbjct: 175 RKDANIENKTHHNGIPAVAFTRNMIEEIENRSKHLSAIKSEVQSQKEFISFLIKQVESAS 234
Query: 223 FADISEVETFTKFLDGELSSLVDERSVLKHFPQWPEQKVDALREAACNYRDLKNLEAEVS 282
+ADISEVETF K+LDGELS+LVDERSVLKHFPQWPEQKVDALREAACNYR+LKNLE+EVS
Sbjct: 235 YADISEVETFIKWLDGELSTLVDERSVLKHFPQWPEQKVDALREAACNYRELKNLESEVS 294
Query: 283 SYEDNPKEPLAQALKRIQALQDR 305
SYEDNPKEP++ ALKRIQALQDR
Sbjct: 295 SYEDNPKEPISMALKRIQALQDR 317
>Medtr5g071840.1 | SKIP interacting protein, putative | HC |
chr5:30556288-30553525 | 20130731
Length = 445
Score = 412 bits (1058), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/323 (67%), Positives = 245/323 (75%), Gaps = 24/323 (7%)
Query: 1 MLKEENESEITY-LKKKVELQMARNESLQRENQELREEVARLKSQIISFKAHDMERKSIL 59
ML+ ENESEIT KK++E+ MARNE LQ+ENQEL+EEV+RLKSQIIS KAH+MERK+IL
Sbjct: 1 MLQVENESEITTSFKKRLEIHMARNELLQKENQELKEEVSRLKSQIISLKAHNMERKTIL 60
Query: 60 WKKIQKSIDGNNAD-------------CEKSSENGNVHSNPGFQDSAXXXXXXXXX---- 102
WKKIQKSID NN+D CEKSSEN + FQDS+
Sbjct: 61 WKKIQKSIDDNNSDSHHTLKPALQAIMCEKSSENQD------FQDSSTSPRKEKSSIVLP 114
Query: 103 XXXXXXXXSSNLLPSHKNERGIKMQQTIAXXXXXXXXXXXFGLKAVRRVPEVIELYRSLT 162
S+ PSHKNE+G+KMQ T A GLK VRRVPEVIELYRSLT
Sbjct: 115 PTPPPKPASTLFSPSHKNEKGMKMQPTAAPPPPPTPSKSSIGLKTVRRVPEVIELYRSLT 174
Query: 163 RKDVATENRIHQNGIPVVAFTRNMIEEIENRSTYLTAIKSEVQRQGEFISFLIKEVEAAS 222
RKD EN+ H NGIP VAFTRNMIEEIENRS +L+AIKSEVQ Q EFISFLIK+VE+AS
Sbjct: 175 RKDANIENKTHHNGIPAVAFTRNMIEEIENRSKHLSAIKSEVQSQKEFISFLIKQVESAS 234
Query: 223 FADISEVETFTKFLDGELSSLVDERSVLKHFPQWPEQKVDALREAACNYRDLKNLEAEVS 282
+ADISEVETF K+LDGELS+LVDERSVLKHFPQWPEQKVDALREAACNYR+LKNLE+EVS
Sbjct: 235 YADISEVETFIKWLDGELSTLVDERSVLKHFPQWPEQKVDALREAACNYRELKNLESEVS 294
Query: 283 SYEDNPKEPLAQALKRIQALQDR 305
SYEDNPKEP++ ALKRIQALQDR
Sbjct: 295 SYEDNPKEPISMALKRIQALQDR 317
>Medtr4g087780.1 | hypothetical protein | HC |
chr4:34535979-34531408 | 20130731
Length = 629
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/159 (57%), Positives = 115/159 (72%), Gaps = 6/159 (3%)
Query: 148 VRRVPEVIELYRSLTRKDVATENRIHQNG----IPVVAFTRNMIEEIENRSTYLTAIKSE 203
VR+VPEV+E Y SL R+D T R +G +P A R+MI EIENRST+L AIK++
Sbjct: 347 VRKVPEVVEFYHSLMRRDSQT-RRESNSGTAAEVPATANARDMIGEIENRSTHLLAIKTD 405
Query: 204 VQRQGEFISFLIKEVEAASFADISEVETFTKFLDGELSSLVDERSVLKHFPQWPEQKVDA 263
V+ QG+FI +LIKEVE A+F DI +V F K+LD ELS LVDER+VLKHF WPEQK DA
Sbjct: 406 VETQGDFIRYLIKEVEGAAFTDIEDVVPFVKWLDDELSYLVDERAVLKHF-DWPEQKADA 464
Query: 264 LREAACNYRDLKNLEAEVSSYEDNPKEPLAQALKRIQAL 302
+REAA Y DLK LE+E SS+ D+P++ ALK++Q L
Sbjct: 465 MREAAFGYCDLKKLESEASSFRDDPRQLCGPALKKMQTL 503
>Medtr1g016290.1 | CHUP1 | HC | chr1:4303228-4308457 | 20130731
Length = 754
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 116/162 (71%), Gaps = 7/162 (4%)
Query: 148 VRRVPEVIELYRSLTRKDVATENRIHQNGI---PVVAFTRN-MIEEIENRSTYLTAIKSE 203
V+R P+V+ELY SL ++D ++ G+ P VA R+ MI EIENRS++L AIK++
Sbjct: 485 VKRAPQVVELYHSLMKRDSRRDS--SSGGLSDAPDVADVRSSMIGEIENRSSHLLAIKAD 542
Query: 204 VQRQGEFISFLIKEVEAASFADISEVETFTKFLDGELSSLVDERSVLKHFPQWPEQKVDA 263
++ QGEF++ LI+EV A + +I +V F K+LD EL LVDER+VLKHF WPE+K D
Sbjct: 543 IETQGEFVNSLIREVNDAVYENIDDVVAFVKWLDDELGFLVDERAVLKHF-DWPEKKADT 601
Query: 264 LREAACNYRDLKNLEAEVSSYEDNPKEPLAQALKRIQALQDR 305
LREAA Y+DLK LE+EVSSY+D+P+ P ALK++ AL ++
Sbjct: 602 LREAAFGYQDLKKLESEVSSYKDDPRLPCDIALKKMVALSEK 643
>Medtr1g093850.1 | CHUP1 | HC | chr1:42112497-42107561 | 20130731
Length = 992
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 108/160 (67%), Gaps = 2/160 (1%)
Query: 144 GLKAVRRVPEVIELYRSLTRKDVATENRIHQNGIPVVAFTR-NMIEEIENRSTYLTAIKS 202
G V+R PE++E Y+SL +++ + + + A TR N+I EIENRS++L A+K+
Sbjct: 707 GDDKVKRAPELVEFYQSLMKREAKKDASLLTSSTSNAADTRSNVIAEIENRSSFLLAVKA 766
Query: 203 EVQRQGEFISFLIKEVEAASFADISEVETFTKFLDGELSSLVDERSVLKHFPQWPEQKVD 262
+V+ QG+F+ L EV AASF+ I +V F +LD ELS L DER+VLKHF WPE K D
Sbjct: 767 DVETQGDFVMSLATEVRAASFSKIEDVVAFVNWLDEELSFLSDERAVLKHF-DWPEGKSD 825
Query: 263 ALREAACNYRDLKNLEAEVSSYEDNPKEPLAQALKRIQAL 302
ALREA+ Y+DL LE +VS++ D+PK P AL+++ +L
Sbjct: 826 ALREASFEYQDLMKLEKQVSNFTDDPKLPCEDALQKMYSL 865
>Medtr4g124070.2 | hydroxyproline-rich glycoprotein family protein |
HC | chr4:51234990-51238821 | 20130731
Length = 574
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 110/164 (67%), Gaps = 5/164 (3%)
Query: 145 LKAVRRVPEVIELYRSLTRKDVATENRI---HQNGIPVVAFTRNMIEEIENRSTYLTAIK 201
L ++ P V++L+ SL +D + + HQ I A +++ EI+NRS +L AI+
Sbjct: 291 LANTQKAPAVVQLFHSLKNQDTKKDLKGSINHQKPITNSAHN-SIVGEIQNRSAHLLAIR 349
Query: 202 SEVQRQGEFISFLIKEVEAASFADISEVETFTKFLDGELSSLVDERSVLKHFPQWPEQKV 261
++Q +GEFI+ LI +V AS+ DI +V F +LDGELS+L DER+VLKHF +WPE+K
Sbjct: 350 EDIQTKGEFINGLINKVVDASYVDIEDVLKFVDWLDGELSTLADERAVLKHF-KWPERKA 408
Query: 262 DALREAACNYRDLKNLEAEVSSYEDNPKEPLAQALKRIQALQDR 305
D +REAA YR+LK LE E+SSY+D+P P +LK+I +L D+
Sbjct: 409 DTMREAAVEYRELKMLEQEISSYKDDPDIPCVASLKKIASLLDK 452
>Medtr4g124070.1 | hydroxyproline-rich glycoprotein family protein |
HC | chr4:51228760-51238821 | 20130731
Length = 574
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 110/164 (67%), Gaps = 5/164 (3%)
Query: 145 LKAVRRVPEVIELYRSLTRKDVATENRI---HQNGIPVVAFTRNMIEEIENRSTYLTAIK 201
L ++ P V++L+ SL +D + + HQ I A +++ EI+NRS +L AI+
Sbjct: 291 LANTQKAPAVVQLFHSLKNQDTKKDLKGSINHQKPITNSAHN-SIVGEIQNRSAHLLAIR 349
Query: 202 SEVQRQGEFISFLIKEVEAASFADISEVETFTKFLDGELSSLVDERSVLKHFPQWPEQKV 261
++Q +GEFI+ LI +V AS+ DI +V F +LDGELS+L DER+VLKHF +WPE+K
Sbjct: 350 EDIQTKGEFINGLINKVVDASYVDIEDVLKFVDWLDGELSTLADERAVLKHF-KWPERKA 408
Query: 262 DALREAACNYRDLKNLEAEVSSYEDNPKEPLAQALKRIQALQDR 305
D +REAA YR+LK LE E+SSY+D+P P +LK+I +L D+
Sbjct: 409 DTMREAAVEYRELKMLEQEISSYKDDPDIPCVASLKKIASLLDK 452
>Medtr4g124070.3 | hydroxyproline-rich glycoprotein family protein |
HC | chr4:51234956-51238821 | 20130731
Length = 573
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 110/164 (67%), Gaps = 5/164 (3%)
Query: 145 LKAVRRVPEVIELYRSLTRKDVATENRI---HQNGIPVVAFTRNMIEEIENRSTYLTAIK 201
L ++ P V++L+ SL +D + + HQ I A +++ EI+NRS +L AI+
Sbjct: 290 LANTQKAPAVVQLFHSLKNQDTKKDLKGSINHQKPITNSAHN-SIVGEIQNRSAHLLAIR 348
Query: 202 SEVQRQGEFISFLIKEVEAASFADISEVETFTKFLDGELSSLVDERSVLKHFPQWPEQKV 261
++Q +GEFI+ LI +V AS+ DI +V F +LDGELS+L DER+VLKHF +WPE+K
Sbjct: 349 EDIQTKGEFINGLINKVVDASYVDIEDVLKFVDWLDGELSTLADERAVLKHF-KWPERKA 407
Query: 262 DALREAACNYRDLKNLEAEVSSYEDNPKEPLAQALKRIQALQDR 305
D +REAA YR+LK LE E+SSY+D+P P +LK+I +L D+
Sbjct: 408 DTMREAAVEYRELKMLEQEISSYKDDPDIPCVASLKKIASLLDK 451
>Medtr4g124070.5 | hydroxyproline-rich glycoprotein family protein |
HC | chr4:51228750-51238821 | 20130731
Length = 573
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 110/164 (67%), Gaps = 5/164 (3%)
Query: 145 LKAVRRVPEVIELYRSLTRKDVATENRI---HQNGIPVVAFTRNMIEEIENRSTYLTAIK 201
L ++ P V++L+ SL +D + + HQ I A +++ EI+NRS +L AI+
Sbjct: 290 LANTQKAPAVVQLFHSLKNQDTKKDLKGSINHQKPITNSAHN-SIVGEIQNRSAHLLAIR 348
Query: 202 SEVQRQGEFISFLIKEVEAASFADISEVETFTKFLDGELSSLVDERSVLKHFPQWPEQKV 261
++Q +GEFI+ LI +V AS+ DI +V F +LDGELS+L DER+VLKHF +WPE+K
Sbjct: 349 EDIQTKGEFINGLINKVVDASYVDIEDVLKFVDWLDGELSTLADERAVLKHF-KWPERKA 407
Query: 262 DALREAACNYRDLKNLEAEVSSYEDNPKEPLAQALKRIQALQDR 305
D +REAA YR+LK LE E+SSY+D+P P +LK+I +L D+
Sbjct: 408 DTMREAAVEYRELKMLEQEISSYKDDPDIPCVASLKKIASLLDK 451
>Medtr4g124070.4 | hydroxyproline-rich glycoprotein family protein |
HC | chr4:51228776-51238821 | 20130731
Length = 573
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 110/164 (67%), Gaps = 5/164 (3%)
Query: 145 LKAVRRVPEVIELYRSLTRKDVATENRI---HQNGIPVVAFTRNMIEEIENRSTYLTAIK 201
L ++ P V++L+ SL +D + + HQ I A +++ EI+NRS +L AI+
Sbjct: 290 LANTQKAPAVVQLFHSLKNQDTKKDLKGSINHQKPITNSAHN-SIVGEIQNRSAHLLAIR 348
Query: 202 SEVQRQGEFISFLIKEVEAASFADISEVETFTKFLDGELSSLVDERSVLKHFPQWPEQKV 261
++Q +GEFI+ LI +V AS+ DI +V F +LDGELS+L DER+VLKHF +WPE+K
Sbjct: 349 EDIQTKGEFINGLINKVVDASYVDIEDVLKFVDWLDGELSTLADERAVLKHF-KWPERKA 407
Query: 262 DALREAACNYRDLKNLEAEVSSYEDNPKEPLAQALKRIQALQDR 305
D +REAA YR+LK LE E+SSY+D+P P +LK+I +L D+
Sbjct: 408 DTMREAAVEYRELKMLEQEISSYKDDPDIPCVASLKKIASLLDK 451
>Medtr5g053270.1 | CHUP1 | HC | chr5:21962356-21968047 | 20130731
Length = 997
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 105/158 (66%), Gaps = 5/158 (3%)
Query: 148 VRRVPEVIELYRSLTRKDVATENR---IHQNGIPVVAFTRNMIEEIENRSTYLTAIKSEV 204
V R P+++E Y+SL +++ + + G A NMI EIENRST+L A+K++V
Sbjct: 716 VHRAPQLVEFYQSLMKREAKKDTSSLLVSSTGNTSDA-RNNMIGEIENRSTFLLAVKADV 774
Query: 205 QRQGEFISFLIKEVEAASFADISEVETFTKFLDGELSSLVDERSVLKHFPQWPEQKVDAL 264
+ QG+F++ L EV A+SF+DI ++ F +LD ELS LVDER+VLKHF WPE K DAL
Sbjct: 775 ETQGDFVTSLATEVRASSFSDIEDLVAFVNWLDEELSFLVDERAVLKHF-DWPEGKADAL 833
Query: 265 REAACNYRDLKNLEAEVSSYEDNPKEPLAQALKRIQAL 302
REAA Y+DL LE VS++ D+PK ALK++ +L
Sbjct: 834 REAAFEYQDLMKLENRVSTFVDDPKLSCEAALKKMYSL 871
>Medtr4g089110.1 | hydroxyproline-rich glycoprotein family protein,
putative | HC | chr4:35745982-35742108 | 20130731
Length = 735
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 185 NMIEEIENRSTYLTAIKSEVQRQGEFISFLIKEVEAASFADISEVETFTKFLDGELSSLV 244
+ + E+ RS+Y I+ +VQ+ + I L + D++E+ F K ++ L +L
Sbjct: 541 DALAEMTKRSSYFIQIEEDVQKYTKQIIELRSRITNFKTKDMTELSKFHKDVESILENLT 600
Query: 245 DERSVLKHFPQWPEQKVDALREAACNYRDLKNLEAEVSSYEDNPKEPLAQALKRIQ 300
DE VL F +P +K++A+R AA Y L ++ E+ +++ P+ Q L +++
Sbjct: 601 DESQVLSRFEGFPTKKLEAIRMAASLYNKLDSILTELQNWK--VVAPMGQLLDKVE 654