Miyakogusa Predicted Gene

Lj1g3v3858530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3858530.1 tr|B9GF53|B9GF53_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_752753 PE=4
SV=1,43.01,0.000000001, ,AV409313.path2.1
         (102 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g027680.2 | GYF domain protein | HC | chr7:9335313-9345417...   157   2e-39
Medtr7g027680.1 | GYF domain protein | HC | chr7:9335311-9344460...   157   2e-39

>Medtr7g027680.2 | GYF domain protein | HC | chr7:9335313-9345417 |
           20130731
          Length = 1639

 Score =  157 bits (396), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 77/100 (77%), Positives = 85/100 (85%)

Query: 3   NQSYHSEIKFSDEQRFNNIVAQDEDATFSNLAGSSNDNPFVRPVGANSSYSHPTGRPIAN 62
           N+SYH EIKFSDEQ FNNI AQDE  T S LAGS+N NP +RPV AN++YSH TG+P+AN
Sbjct: 660 NRSYHPEIKFSDEQYFNNIGAQDEGTTMSKLAGSNNGNPLMRPVEANAAYSHHTGKPVAN 719

Query: 63  EITGSDTQNSEADKLHPFGLLMSELRDGSHLRRAQSSNNS 102
           E  GSDT NSEADKLHPFGLLMSELRDGS LRRAQSSN+S
Sbjct: 720 EAIGSDTHNSEADKLHPFGLLMSELRDGSQLRRAQSSNSS 759


>Medtr7g027680.1 | GYF domain protein | HC | chr7:9335311-9344460 |
           20130731
          Length = 1646

 Score =  157 bits (396), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 77/100 (77%), Positives = 85/100 (85%)

Query: 3   NQSYHSEIKFSDEQRFNNIVAQDEDATFSNLAGSSNDNPFVRPVGANSSYSHPTGRPIAN 62
           N+SYH EIKFSDEQ FNNI AQDE  T S LAGS+N NP +RPV AN++YSH TG+P+AN
Sbjct: 660 NRSYHPEIKFSDEQYFNNIGAQDEGTTMSKLAGSNNGNPLMRPVEANAAYSHHTGKPVAN 719

Query: 63  EITGSDTQNSEADKLHPFGLLMSELRDGSHLRRAQSSNNS 102
           E  GSDT NSEADKLHPFGLLMSELRDGS LRRAQSSN+S
Sbjct: 720 EAIGSDTHNSEADKLHPFGLLMSELRDGSQLRRAQSSNSS 759