Miyakogusa Predicted Gene

Lj1g3v3847330.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3847330.1 Non Characterized Hit- tr|C6TGU9|C6TGU9_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2 S,75.38,0,FAMILY
NOT NAMED,NULL; TCP,Transcription factor TCP subgroup; seg,NULL;
TCP,Transcription factor, TC,CUFF.31312.1
         (311 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g028160.1 | TCP family transcription factor | HC | chr7:94...   313   1e-85
Medtr4g108370.1 | TCP family transcription factor | HC | chr4:44...   144   1e-34
Medtr5g039600.1 | TCP family transcription factor | HC | chr5:17...   139   2e-33
Medtr8g033070.1 | TCP family transcription factor | HC | chr8:12...   135   7e-32
Medtr2g006150.1 | TCP family transcription factor | HC | chr2:47...   135   7e-32
Medtr2g006150.2 | TCP family transcription factor | HC | chr2:47...   134   8e-32
Medtr1g101810.4 | TCP family transcription factor | HC | chr1:45...   130   2e-30
Medtr1g101810.3 | TCP family transcription factor | HC | chr1:45...   130   2e-30
Medtr1g101810.2 | TCP family transcription factor | HC | chr1:45...   130   2e-30
Medtr1g101810.1 | TCP family transcription factor | HC | chr1:45...   130   2e-30
Medtr1g114380.1 | TCP family transcription factor | HC | chr1:51...   129   3e-30
Medtr1g063870.1 | TCP family transcription factor | HC | chr1:28...   125   7e-29
Medtr1g038650.1 | TCP family transcription factor | HC | chr1:14...   124   1e-28
Medtr1g038650.2 | TCP family transcription factor | HC | chr1:14...   124   1e-28

>Medtr7g028160.1 | TCP family transcription factor | HC |
           chr7:9485316-9483450 | 20130731
          Length = 284

 Score =  313 bits (802), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 177/290 (61%), Positives = 199/290 (68%), Gaps = 39/290 (13%)

Query: 1   MDPKGSKQQNQEVVPNFLXXXXXXXXXXXMGENKPSEVKDFQIVIAE---KDESKKQLAP 57
           MDPK SKQQ+Q                  MGENK SE K+ QIV++E   KDE+KKQLAP
Sbjct: 1   MDPKNSKQQSQ---------------LSNMGENKESETKNLQIVLSETTTKDETKKQLAP 45

Query: 58  KRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAAT 117
           KRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ+EPSIIAAT
Sbjct: 46  KRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAAT 105

Query: 118 GTGTIPASALASAAGNSVSQQGTSLSAGLHQKFDEMGGGGGANSRTSWGMV--GGNLGRP 175
           GTGTIPASALAS +GN+++ QG+SLS+GL             N R +W          + 
Sbjct: 106 GTGTIPASALAS-SGNTLTPQGSSLSSGLQ-----------LNDRNTWAQTHQAHQAHQG 153

Query: 176 HVATATGLWP--HVTGFGFQXXXXX---XXXXXXXXESSNYLQKIGFPGFDLP-GATTNM 229
           H  ++T LWP  HV GFGF                  S NY QKIGF GFD+P G    +
Sbjct: 154 HHVSSTSLWPHHHVGGFGFHQSSSSGGLVATTVGENNSGNYFQKIGFSGFDMPTGTNLGV 213

Query: 230 GPMSFTSILGGGNNQHMPGLELGLSQDGHIGVLNPQALSQIYQQMGQSRV 279
           G MSFTSILGG N Q MPGLELGLSQDGHIGVLN QAL+QIYQQ+GQ++ 
Sbjct: 214 GGMSFTSILGGANQQ-MPGLELGLSQDGHIGVLNQQALTQIYQQIGQNQT 262


>Medtr4g108370.1 | TCP family transcription factor | HC |
           chr4:44961490-44959266 | 20130731
          Length = 437

 Score =  144 bits (362), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 65/77 (84%), Positives = 72/77 (93%)

Query: 49  DESKKQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ 108
           D + K+  PKRTS KDRHTKVEGRGRRIRMPALCAAR+FQLTRELGHKSDGETI+WLLQQ
Sbjct: 84  DPANKKPPPKRTSTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQ 143

Query: 109 AEPSIIAATGTGTIPAS 125
           AEP++IAATGTGTIPA+
Sbjct: 144 AEPAVIAATGTGTIPAN 160


>Medtr5g039600.1 | TCP family transcription factor | HC |
           chr5:17429938-17427951 | 20130731
          Length = 416

 Score =  139 bits (351), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 69/104 (66%), Positives = 82/104 (78%), Gaps = 3/104 (2%)

Query: 44  VIAEKDESKKQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQ 103
            I   D+ KK   PKR S KDRHTKV+GRGRRIRMPA CAAR+FQLTRELGHKSDGETI+
Sbjct: 50  AIISSDQQKKP-PPKRASTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIE 108

Query: 104 WLLQQAEPSIIAATGTGTIPASALASAAGNSVSQQGTSLSAGLH 147
           WLLQQAEP++IAATGTGTIPA+   ++   S+   G+++SA  H
Sbjct: 109 WLLQQAEPAVIAATGTGTIPAN--FTSLNISLRSSGSTMSAPSH 150


>Medtr8g033070.1 | TCP family transcription factor | HC |
           chr8:12681955-12683583 | 20130731
          Length = 333

 Score =  135 bits (339), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 60/71 (84%), Positives = 67/71 (94%)

Query: 58  KRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAAT 117
           KR+S KDRHTKVEGRGRRIRMPA CAARIFQLTRELGHKSDGETI+WLL+ AEP+IIAAT
Sbjct: 76  KRSSTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAAT 135

Query: 118 GTGTIPASALA 128
           GTGT+PA A++
Sbjct: 136 GTGTVPAIAMS 146


>Medtr2g006150.1 | TCP family transcription factor | HC |
           chr2:471446-468724 | 20130731
          Length = 487

 Score =  135 bits (339), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 65/88 (73%), Positives = 74/88 (84%), Gaps = 2/88 (2%)

Query: 57  PKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAA 116
           P + S KDRHTKV+GRGRRIRMPA CAAR+FQLTRELGHKSDGETI+WLLQQAEP+IIAA
Sbjct: 125 PPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAA 184

Query: 117 TGTGTIPASALASAAGNSVSQQGTSLSA 144
           TGTGTIPA+   S    S+   G++LSA
Sbjct: 185 TGTGTIPAN--FSTLNVSLRSSGSTLSA 210


>Medtr2g006150.2 | TCP family transcription factor | HC |
           chr2:471446-468724 | 20130731
          Length = 447

 Score =  134 bits (338), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 65/88 (73%), Positives = 74/88 (84%), Gaps = 2/88 (2%)

Query: 57  PKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAA 116
           P + S KDRHTKV+GRGRRIRMPA CAAR+FQLTRELGHKSDGETI+WLLQQAEP+IIAA
Sbjct: 125 PPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAA 184

Query: 117 TGTGTIPASALASAAGNSVSQQGTSLSA 144
           TGTGTIPA+   S    S+   G++LSA
Sbjct: 185 TGTGTIPAN--FSTLNVSLRSSGSTLSA 210


>Medtr1g101810.4 | TCP family transcription factor | HC |
           chr1:45965204-45966803 | 20130731
          Length = 337

 Score =  130 bits (327), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 59/74 (79%), Positives = 68/74 (91%)

Query: 55  LAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSII 114
           +A  + S+KDRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETI+WLL+QAEPSII
Sbjct: 57  VAAAKRSSKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLEQAEPSII 116

Query: 115 AATGTGTIPASALA 128
            ATGTGT+PA A++
Sbjct: 117 EATGTGTVPAIAVS 130


>Medtr1g101810.3 | TCP family transcription factor | HC |
           chr1:45965204-45966803 | 20130731
          Length = 337

 Score =  130 bits (327), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 59/74 (79%), Positives = 68/74 (91%)

Query: 55  LAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSII 114
           +A  + S+KDRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETI+WLL+QAEPSII
Sbjct: 57  VAAAKRSSKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLEQAEPSII 116

Query: 115 AATGTGTIPASALA 128
            ATGTGT+PA A++
Sbjct: 117 EATGTGTVPAIAVS 130


>Medtr1g101810.2 | TCP family transcription factor | HC |
           chr1:45965204-45966803 | 20130731
          Length = 337

 Score =  130 bits (327), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 59/74 (79%), Positives = 68/74 (91%)

Query: 55  LAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSII 114
           +A  + S+KDRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETI+WLL+QAEPSII
Sbjct: 57  VAAAKRSSKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLEQAEPSII 116

Query: 115 AATGTGTIPASALA 128
            ATGTGT+PA A++
Sbjct: 117 EATGTGTVPAIAVS 130


>Medtr1g101810.1 | TCP family transcription factor | HC |
           chr1:45965265-45966764 | 20130731
          Length = 367

 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 59/74 (79%), Positives = 68/74 (91%)

Query: 55  LAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSII 114
           +A  + S+KDRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETI+WLL+QAEPSII
Sbjct: 87  VAAAKRSSKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLEQAEPSII 146

Query: 115 AATGTGTIPASALA 128
            ATGTGT+PA A++
Sbjct: 147 EATGTGTVPAIAVS 160


>Medtr1g114380.1 | TCP family transcription factor | HC |
           chr1:51614461-51616519 | 20130731
          Length = 257

 Score =  129 bits (325), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 59/77 (76%), Positives = 70/77 (90%)

Query: 49  DESKKQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ 108
           D +++QLA K+   KDRH+KV+GRGRRIRMP +CAAR+FQLTRELGHKSDG+TI+WLL+Q
Sbjct: 20  DPNRQQLAVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQ 79

Query: 109 AEPSIIAATGTGTIPAS 125
           AEPSIIAATGTGT PAS
Sbjct: 80  AEPSIIAATGTGTTPAS 96


>Medtr1g063870.1 | TCP family transcription factor | HC |
           chr1:28041642-28042798 | 20130731
          Length = 205

 Score =  125 bits (313), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 56/68 (82%), Positives = 61/68 (89%)

Query: 57  PKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAA 116
           P   S KDRHTKV GRGRR+RMP LCAARIFQLTRELGH+SDGETI+WLL+ AEPSIIAA
Sbjct: 44  PASRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAA 103

Query: 117 TGTGTIPA 124
           TGTGT+PA
Sbjct: 104 TGTGTVPA 111


>Medtr1g038650.1 | TCP family transcription factor | HC |
           chr1:14250840-14248871 | 20130731
          Length = 235

 Score =  124 bits (311), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 56/75 (74%), Positives = 67/75 (89%)

Query: 51  SKKQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAE 110
           S+  +  K+  +KDRH+KV+GRGRRIRMP +CAAR+FQLTRELGHKSDG+TI+WLL+QAE
Sbjct: 21  SQNAITVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE 80

Query: 111 PSIIAATGTGTIPAS 125
           PSIIAATGTGT PAS
Sbjct: 81  PSIIAATGTGTTPAS 95


>Medtr1g038650.2 | TCP family transcription factor | HC |
           chr1:14250840-14248871 | 20130731
          Length = 235

 Score =  124 bits (311), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 56/75 (74%), Positives = 67/75 (89%)

Query: 51  SKKQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAE 110
           S+  +  K+  +KDRH+KV+GRGRRIRMP +CAAR+FQLTRELGHKSDG+TI+WLL+QAE
Sbjct: 21  SQNAITVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE 80

Query: 111 PSIIAATGTGTIPAS 125
           PSIIAATGTGT PAS
Sbjct: 81  PSIIAATGTGTTPAS 95