Miyakogusa Predicted Gene

Lj1g3v3835720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3835720.1 Non Characterized Hit- tr|D7MJ07|D7MJ07_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,72.06,3e-16,DUF3339,Protein of unknown function
DUF3339,CUFF.31266.1
         (68 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g028945.1 | transmembrane protein, putative | HC | chr7:10...   107   2e-24
Medtr8g096840.1 | transmembrane protein, putative | HC | chr8:40...    74   3e-14
Medtr3g085020.1 | transmembrane protein, putative | HC | chr3:38...    72   1e-13
Medtr8g097020.1 | transmembrane protein, putative | HC | chr8:34...    72   1e-13
Medtr8g027820.1 | transmembrane protein, putative | HC | chr8:10...    65   1e-11
Medtr3g085030.1 | transmembrane protein, putative | HC | chr3:38...    62   1e-10
Medtr7g028975.1 | transmembrane protein, putative | HC | chr7:10...    62   1e-10
Medtr7g028940.1 | transmembrane protein, putative | HC | chr7:10...    62   2e-10
Medtr7g028870.1 | AT.I.24-6 protein, putative | HC | chr7:997568...    61   2e-10
Medtr7g028815.1 | transmembrane protein, putative | HC | chr7:99...    60   4e-10
Medtr8g097030.1 | transmembrane protein, putative | HC | chr8:34...    52   1e-07

>Medtr7g028945.1 | transmembrane protein, putative | HC |
          chr7:10032927-10033624 | 20130731
          Length = 69

 Score =  107 bits (267), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/68 (85%), Positives = 65/68 (95%)

Query: 1  MNDWAPPLIAAALFWLLSPGMIFQLPGKNAPFEFMNMKTTVASIFVHTVIYGLFLMLFFI 60
          MN+WAPPLIAAALFWLLSPGMIFQLPGKN+P EFMNMKTT+ASIFVHTV+YGL LMLFF+
Sbjct: 1  MNNWAPPLIAAALFWLLSPGMIFQLPGKNSPLEFMNMKTTIASIFVHTVLYGLLLMLFFV 60

Query: 61 VLSVHVYI 68
          VL +H+YI
Sbjct: 61 VLDLHLYI 68


>Medtr8g096840.1 | transmembrane protein, putative | HC |
          chr8:40648593-40647957 | 20130731
          Length = 69

 Score = 73.9 bits (180), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 45/67 (67%)

Query: 1  MNDWAPPLIAAALFWLLSPGMIFQLPGKNAPFEFMNMKTTVASIFVHTVIYGLFLMLFFI 60
          M DW P +IA  LF LLSPG++FQ+PG+    EF NM+T+ ASI VH +IY   + +  I
Sbjct: 1  MADWGPVIIAVVLFVLLSPGLLFQIPGRGKVIEFGNMQTSGASILVHAIIYFGLITILLI 60

Query: 61 VLSVHVY 67
           + VH+Y
Sbjct: 61 AVGVHIY 67


>Medtr3g085020.1 | transmembrane protein, putative | HC |
          chr3:38419164-38418515 | 20130731
          Length = 69

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 46/66 (69%)

Query: 1  MNDWAPPLIAAALFWLLSPGMIFQLPGKNAPFEFMNMKTTVASIFVHTVIYGLFLMLFFI 60
          M DW P +IA  LF LLSPG++FQ+PG+N   EF NM+T+  SI VHT+++   + +F I
Sbjct: 1  MADWGPVVIAVVLFVLLSPGLLFQMPGRNKVVEFGNMQTSGVSILVHTILFFGLITIFLI 60

Query: 61 VLSVHV 66
           + VH+
Sbjct: 61 AIGVHI 66


>Medtr8g097020.1 | transmembrane protein, putative | HC |
          chr8:34795755-34796208 | 20130731
          Length = 69

 Score = 71.6 bits (174), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 50/68 (73%)

Query: 1  MNDWAPPLIAAALFWLLSPGMIFQLPGKNAPFEFMNMKTTVASIFVHTVIYGLFLMLFFI 60
          M+DW P  ++  LF LL+PG++FQ+PG++   EF N +T+ ASI +H+++Y  F+ +FF+
Sbjct: 1  MSDWGPVFVSIVLFVLLTPGLLFQIPGRSRCVEFGNFQTSGASILIHSLLYFGFVCIFFL 60

Query: 61 VLSVHVYI 68
           + +H+YI
Sbjct: 61 AIKIHLYI 68


>Medtr8g027820.1 | transmembrane protein, putative | HC |
          chr8:10163672-10164291 | 20130731
          Length = 110

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 46/68 (67%)

Query: 1  MNDWAPPLIAAALFWLLSPGMIFQLPGKNAPFEFMNMKTTVASIFVHTVIYGLFLMLFFI 60
          M+DW P  ++  LF LL+PG++ Q+PGK    EF N +T+  SI +H+++Y   + +FF+
Sbjct: 1  MSDWGPVFVSVVLFILLTPGLLVQIPGKGKMVEFGNFQTSGLSILIHSILYFALVCIFFL 60

Query: 61 VLSVHVYI 68
           + +H+Y+
Sbjct: 61 AIRIHMYM 68


>Medtr3g085030.1 | transmembrane protein, putative | HC |
          chr3:38421018-38420546 | 20130731
          Length = 69

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 45/68 (66%)

Query: 1  MNDWAPPLIAAALFWLLSPGMIFQLPGKNAPFEFMNMKTTVASIFVHTVIYGLFLMLFFI 60
          M +W   ++   LF LL+PG++FQ+PG++   EF N +T+ A+I VH+++Y   + LF I
Sbjct: 1  MFNWGSIVVTVMLFVLLTPGLLFQVPGRSRCIEFGNFQTSAAAIVVHSLLYFGLVCLFLI 60

Query: 61 VLSVHVYI 68
           + VH YI
Sbjct: 61 AIRVHFYI 68


>Medtr7g028975.1 | transmembrane protein, putative | HC |
          chr7:10049810-10049007 | 20130731
          Length = 69

 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 43/67 (64%)

Query: 1  MNDWAPPLIAAALFWLLSPGMIFQLPGKNAPFEFMNMKTTVASIFVHTVIYGLFLMLFFI 60
          M DW P  ++  LF LL+PG++FQ+PG+    EF N +T+  SI +H ++Y   + +F +
Sbjct: 1  MADWGPIFVSVVLFILLTPGLLFQIPGRGRFVEFGNFQTSGLSILIHAMLYFALVCIFML 60

Query: 61 VLSVHVY 67
           + +H+Y
Sbjct: 61 AIGIHIY 67


>Medtr7g028940.1 | transmembrane protein, putative | HC |
          chr7:10030742-10029951 | 20130731
          Length = 69

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 39/67 (58%)

Query: 1  MNDWAPPLIAAALFWLLSPGMIFQLPGKNAPFEFMNMKTTVASIFVHTVIYGLFLMLFFI 60
          M+DWAP +I   LF  L PG++F  PG     EF  MKT   +IF+HT+I+     +  +
Sbjct: 1  MSDWAPVVIGVVLFVFLQPGLLFSFPGNGKQLEFGGMKTNGKAIFIHTLIFFGLYAVIIL 60

Query: 61 VLSVHVY 67
           L VH+Y
Sbjct: 61 ALRVHIY 67


>Medtr7g028870.1 | AT.I.24-6 protein, putative | HC |
          chr7:9975680-9976311 | 20130731
          Length = 70

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 40/65 (61%)

Query: 3  DWAPPLIAAALFWLLSPGMIFQLPGKNAPFEFMNMKTTVASIFVHTVIYGLFLMLFFIVL 62
          DW P ++A ALF +LSPG++FQ P +    EF NM T+  SI +H +IY     +  I +
Sbjct: 4  DWGPVIVAVALFIVLSPGLLFQFPARIRVVEFGNMSTSGISILIHAIIYFCIFTILVIAI 63

Query: 63 SVHVY 67
           +HV+
Sbjct: 64 GIHVH 68


>Medtr7g028815.1 | transmembrane protein, putative | HC |
          chr7:9938062-9937370 | 20130731
          Length = 117

 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 37/51 (72%)

Query: 1  MNDWAPPLIAAALFWLLSPGMIFQLPGKNAPFEFMNMKTTVASIFVHTVIY 51
          M DWAP +I   LF L SPG++FQLPGK    EF+N +T+  SIFVH++++
Sbjct: 1  MADWAPIVIGLILFVLFSPGLLFQLPGKGRVVEFVNFQTSAISIFVHSLLF 51


>Medtr8g097030.1 | transmembrane protein, putative | HC |
          chr8:34800006-34801017 | 20130731
          Length = 70

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 44/65 (67%)

Query: 3  DWAPPLIAAALFWLLSPGMIFQLPGKNAPFEFMNMKTTVASIFVHTVIYGLFLMLFFIVL 62
          DWAP +++  LF LLSPG++FQLP K     F +M+T+  SI VHT+I+   + +F + +
Sbjct: 4  DWAPVVVSVVLFVLLSPGLLFQLPAKGRVVAFGSMQTSGLSILVHTIIFFGLVTIFLLAI 63

Query: 63 SVHVY 67
           VH+Y
Sbjct: 64 GVHIY 68